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(partial) EasyBuild log for failed build of /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2106-foss-2021a.eb (easyblock PR(s) #3299)
== 2024-04-07 21:16:26,462 easyblock.py:314 INFO This is EasyBuild 5.0.0.dev0-ra14a2926452b1d64083e4f3dd7e6a311419f778d (framework: 5.0.0.dev0-r3ac8dd8df8fca19d19ab32c7d390e1526daed3ae, easyblocks: 5.0.0.dev0-ra14a2926452b1d64083e4f3dd7e6a311419f778d) on host bear-pg0105u03a.
== 2024-04-07 21:16:26,462 easyblock.py:320 INFO This is easyblock EB_OpenFOAM from module easybuild.easyblocks.openfoam (/dev/shm/branfosj/tmp-up-EL8/included-easyblocks-hxk5e0wl/easybuild/easyblocks/openfoam.py)
== 2024-04-07 21:16:26,462 easyblock.py:1050 INFO Build dir set to /dev/shm/branfosj/build-up-EL8/OpenFOAM/v2106/foss-2021a
== 2024-04-07 21:16:26,463 easyblock.py:1107 INFO Software install dir set to /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a
== 2024-04-07 21:16:26,463 easyblock.py:1112 INFO Module install dir set to /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all
== 2024-04-07 21:16:26,463 easyblock.py:289 INFO Init completed for application name OpenFOAM version v2106
== 2024-04-07 21:16:26,463 easyblock.py:4266 INFO Obtained application instance of for OpenFOAM (easyblock: None)
== 2024-04-07 21:16:26,463 easyconfig.py:1680 INFO Generating template values...
== 2024-04-07 21:16:26,463 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-04-07 21:16:26,463 mpi.py:298 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-04-07 21:16:26,463 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='openfoam', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='openfoam', module_name='OpenFOAM/v2106-foss-2021a', mpi_cmd_prefix='mpirun -n 1', name='OpenFOAM', nameletter='O', nameletterlower='o', namelower='openfoam', sysroot='', toolchain_name='foss', toolchain_version='2021a', version='v2106', version_major='v2106', versionprefix='', versionsuffix=''
== 2024-04-07 21:16:26,464 one.py:179 INFO Skipping reformatting value for parameter 'toolchain'
== 2024-04-07 21:16:26,464 one.py:179 INFO Skipping reformatting value for parameter 'toolchainopts'
== 2024-04-07 21:16:26,465 filetools.py:1893 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/reprod_20240407211626_2273001 (parents: True, set_gid: False, sticky: False)
== 2024-04-07 21:16:26,465 easyblock.py:4514 INFO Dumped easyconfig instance to /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/reprod_20240407211626_2273001/OpenFOAM-v2106-foss-2021a.eb
== 2024-04-07 21:16:26,465 filetools.py:1893 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/reprod_20240407211626_2273001/easyblocks (parents: True, set_gid: False, sticky: False)
== 2024-04-07 21:16:26,465 filetools.py:2369 INFO /dev/shm/branfosj/tmp-up-EL8/included-easyblocks-hxk5e0wl/easybuild/easyblocks/openfoam.py copied to /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/reprod_20240407211626_2273001/easyblocks/openfoam.py
== 2024-04-07 21:16:26,465 easyblock.py:4494 INFO Dumped easyblock openfoam.py required for reproduction to /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/reprod_20240407211626_2273001/easyblocks
== 2024-04-07 21:16:26,465 filetools.py:1893 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/reprod_20240407211626_2273001/hooks (parents: True, set_gid: False, sticky: False)
== 2024-04-07 21:16:26,466 filetools.py:2369 INFO /rds/projects/b/branfosj-bear-apps/apps_scripts/easybuild_hooks.py copied to /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/reprod_20240407211626_2273001/hooks/easybuild_hooks.py
== 2024-04-07 21:16:26,466 easyblock.py:4526 INFO Dumped hooks file /rds/projects/b/branfosj-bear-apps/apps_scripts/easybuild_hooks.py which is (potentially) required for reproduction to /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/reprod_20240407211626_2273001/hooks/easybuild_hooks.py
== 2024-04-07 21:16:26,467 easyblock.py:2241 INFO Number of iterations to perform for central part of installation procedure: 1
== 2024-04-07 21:16:26,468 build_log.py:267 INFO building and installing OpenFOAM/v2106-foss-2021a...
== 2024-04-07 21:16:26,473 filetools.py:1976 INFO Lock /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_OpenFOAM_v2106-foss-2021a.lock does not exist
== 2024-04-07 21:16:26,473 filetools.py:1933 INFO Creating lock at /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_OpenFOAM_v2106-foss-2021a.lock...
== 2024-04-07 21:16:26,473 filetools.py:1893 INFO Creating directory /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_OpenFOAM_v2106-foss-2021a.lock (parents: True, set_gid: False, sticky: False)
== 2024-04-07 21:16:26,473 filetools.py:1942 INFO Lock created: /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_OpenFOAM_v2106-foss-2021a.lock
== 2024-04-07 21:16:26,473 easyblock.py:298 INFO Changing build dir to /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a
== 2024-04-07 21:16:26,473 build_log.py:267 INFO fetching files...
== 2024-04-07 21:16:26,476 easyblock.py:3983 INFO Starting fetch step
== 2024-04-07 21:16:26,476 easyconfig.py:1680 INFO Generating template values...
== 2024-04-07 21:16:26,476 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-04-07 21:16:26,476 mpi.py:298 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-04-07 21:16:26,476 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='openfoam', builddir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='openfoam', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', module_name='OpenFOAM/v2106-foss-2021a', mpi_cmd_prefix='mpirun -n 1', name='OpenFOAM', nameletter='O', nameletterlower='o', namelower='openfoam', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021a', version='v2106', version_major='v2106', versionprefix='', versionsuffix=''
== 2024-04-07 21:16:26,476 hooks.py:215 INFO Found pre_fetch_hook hook
== 2024-04-07 21:16:26,476 hooks.py:249 INFO Running 'pre_fetch_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:16:26,852 easyblock.py:2241 INFO Number of iterations to perform for central part of installation procedure: 1
== 2024-04-07 21:16:27,263 easyblock.py:3991 INFO Running method fetch_step part of step fetch
== 2024-04-07 21:16:27,263 easyblock.py:2363 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2024-04-07 21:16:27,264 easyblock.py:803 INFO Considering directory in which easyconfig file is located when searching for OpenFOAM-v2106.tgz: /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM
== 2024-04-07 21:16:27,264 tools.py:273 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin/eb
== 2024-04-07 21:16:27,264 tools.py:289 INFO Not considering /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8 (no easybuild/easyconfigs subdir found)
== 2024-04-07 21:16:29,078 filetools.py:802 INFO File size for https://sourceforge.net/projects/openfoam/files/v2106/OpenFOAM-v2106.tgz: 65968877
== 2024-04-07 21:16:30,072 filetools.py:809 INFO Downloaded file OpenFOAM-v2106.tgz from url https://sourceforge.net/projects/openfoam/files/v2106/OpenFOAM-v2106.tgz to /rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz
== 2024-04-07 21:16:30,072 filetools.py:841 INFO Successful download of file OpenFOAM-v2106.tgz from url https://sourceforge.net/projects/openfoam/files/v2106/OpenFOAM-v2106.tgz to path /rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz
== 2024-04-07 21:16:30,075 easyblock.py:944 INFO Successfully downloaded source file OpenFOAM-v2106.tgz from https://sourceforge.net/projects/openfoam/files/v2106/OpenFOAM-v2106.tgz
== 2024-04-07 21:16:30,075 easyblock.py:497 INFO Added sources: [{'name': 'OpenFOAM-v2106.tgz', 'path': '/rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz', 'cmd': None, 'checksum': '11e41e5b9a253ef592a8f6b79f6aded623b28308192d02cec1327078523b5a37', 'finalpath': '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a'}]
== 2024-04-07 21:16:30,076 easyblock.py:803 INFO Considering directory in which easyconfig file is located when searching for OpenFOAM-v2012-cleanup.patch: /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM
== 2024-04-07 21:16:30,076 tools.py:273 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin/eb
== 2024-04-07 21:16:30,076 tools.py:289 INFO Not considering /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8 (no easybuild/easyconfigs subdir found)
== 2024-04-07 21:16:30,077 easyblock.py:844 INFO Found file OpenFOAM-v2012-cleanup.patch at /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2012-cleanup.patch
== 2024-04-07 21:16:30,077 easyblock.py:803 INFO Considering directory in which easyconfig file is located when searching for OpenFOAM-v1906-wmake-ompi.patch: /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM
== 2024-04-07 21:16:30,077 tools.py:273 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin/eb
== 2024-04-07 21:16:30,078 tools.py:289 INFO Not considering /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8 (no easybuild/easyconfigs subdir found)
== 2024-04-07 21:16:30,097 easyblock.py:844 INFO Found file OpenFOAM-v1906-wmake-ompi.patch at /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v1906-wmake-ompi.patch
== 2024-04-07 21:16:30,097 easyblock.py:536 INFO Added patches: [{'name': 'OpenFOAM-v2012-cleanup.patch', 'level': 1, 'postinstall': False, 'path': '/rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2012-cleanup.patch', 'checksum': 'cdd2597a1ac1448e9bd33a364a8dfe17f51cc9ab5a8e0ab67cf92bba3ed9da43'}, {'name': 'OpenFOAM-v1906-wmake-ompi.patch', 'postinstall': False, 'path': '/rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v1906-wmake-ompi.patch', 'checksum': '518e27683c5c41400cfbc17b31effa50b31b25916dccbf85b18b0b955f642505'}]
== 2024-04-07 21:16:30,215 easyblock.py:2416 INFO md5 checksum for /rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz: e5fe7768407fdccc3e160d9c1b2d0a1c
== 2024-04-07 21:16:30,289 easyblock.py:2416 INFO sha256 checksum for /rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz: 11e41e5b9a253ef592a8f6b79f6aded623b28308192d02cec1327078523b5a37
== 2024-04-07 21:16:30,302 easyblock.py:2416 INFO md5 checksum for /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2012-cleanup.patch: e5d06bfff582065b185216e6a962bc9b
== 2024-04-07 21:16:30,302 easyblock.py:2416 INFO sha256 checksum for /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2012-cleanup.patch: cdd2597a1ac1448e9bd33a364a8dfe17f51cc9ab5a8e0ab67cf92bba3ed9da43
== 2024-04-07 21:16:30,302 easyblock.py:2416 INFO md5 checksum for /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v1906-wmake-ompi.patch: 2af67f39b2b25d03d32ff4585ce06598
== 2024-04-07 21:16:30,303 easyblock.py:2416 INFO sha256 checksum for /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v1906-wmake-ompi.patch: 518e27683c5c41400cfbc17b31effa50b31b25916dccbf85b18b0b955f642505
== 2024-04-07 21:16:30,321 easyblock.py:2451 INFO Checking dirs that need to be created: ['/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/OpenFOAM', '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/cae/OpenFOAM']
== 2024-04-07 21:16:30,321 filetools.py:1893 INFO Creating directory /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a (parents: True, set_gid: False, sticky: False)
== 2024-04-07 21:16:30,322 hooks.py:215 INFO Found post_fetch_hook hook
== 2024-04-07 21:16:30,322 hooks.py:249 INFO Running 'post_fetch_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:16:30,322 build_log.py:267 INFO ... (took 3 secs)
== 2024-04-07 21:16:30,325 build_log.py:267 INFO creating build dir, resetting environment...
== 2024-04-07 21:16:30,328 easyblock.py:3983 INFO Starting ready step
== 2024-04-07 21:16:30,328 easyconfig.py:1680 INFO Generating template values...
== 2024-04-07 21:16:30,328 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-04-07 21:16:30,328 mpi.py:298 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-04-07 21:16:30,328 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='openfoam', builddir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='openfoam', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', module_name='OpenFOAM/v2106-foss-2021a', mpi_cmd_prefix='mpirun -n 1', name='OpenFOAM', nameletter='O', nameletterlower='o', namelower='openfoam', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021a', version='v2106', version_major='v2106', versionprefix='', versionsuffix=''
== 2024-04-07 21:16:30,328 hooks.py:215 INFO Found pre_ready_hook hook
== 2024-04-07 21:16:30,328 hooks.py:249 INFO Running 'pre_ready_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:16:30,529 easyblock.py:3991 INFO Running method check_readiness_step part of step ready
== 2024-04-07 21:16:30,530 easyblock.py:2260 INFO Setting parallelism: 24
== 2024-04-07 21:16:30,530 run.py:392 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python --terse list' in /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs
== 2024-04-07 21:16:30,582 run.py:484 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only):
import os
os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "bE5hbWUgPSAiYmVhci1hcHBzLzIwMTliL2xpdmUiLApsb2FkT3JkZXIgPSA4LApwcm9wVCA9IHt9LApzdGFja0RlcHRoID0gMiwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gImJlYXItYXBwcy8yMDE5YiIsCndWID0gIl5saXZlLip6ZmluYWwiLAp9LApbImJlYXItYXBwcy8yMDIwYSJdID0gewpmbiA9ICIvcmRzL2JlYXItYXBwcy9zeXN0ZW0vbW9kdWxlcy9iZWFyLWFwcHMvMjAyMGEvbGl2ZSIsCmZ1bGxOYW1lID0gImJlYXItYXBwcy8yMDIwYS9saXZlIiwKbG9hZE9yZGVyID0gMTAsCnByb3BUID0ge30sCnN0YWNrRGVwdGggPSAyLApzdGF0dXMgPSAiYWN0aXZlIiwKdXNlck5hbWUgPSAiYmVhci1hcHBzLzIwMjBhIiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0s";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "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";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "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";
os.environ["_ModuleTable009_"] = "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";
os.environ["_ModuleTable010_"] = "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";
os.environ["_ModuleTable011_"] = "b2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo=";
os.environ["_ModuleTable_Sz_"] = "11";
_mlstatus = True
== 2024-04-07 21:16:30,583 run.py:485 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only):
bb-variables/live
slurm-helpers/live
openmpi-env/live
bear-licences/live
bb-singularity-conf/live
bear-apps/2018b/live
bear-apps/2019a/live
bear-apps/2019b/live
bear-apps/handbuilt/2020
bear-apps/2020a/live
bear-apps/2020b/live
bear-apps/2021a/live
bear-apps/auto-load
bluebear/live
== 2024-04-07 21:16:30,583 run.py:490 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python --terse list
== 2024-04-07 21:16:30,583 easyblock.py:2312 WARNING Loaded modules detected: ['bb-variables/live', 'slurm-helpers/live', 'openmpi-env/live', 'bear-licences/live', 'bb-singularity-conf/live', 'bear-apps/2018b/live', 'bear-apps/2019a/live', 'bear-apps/2019b/live', 'bear-apps/handbuilt/2020', 'bear-apps/2020a/live', 'bear-apps/2020b/live', 'bear-apps/2021a/live', 'bear-apps/auto-load', 'bluebear/live']
== 2024-04-07 21:16:30,584 easyblock.py:3991 INFO Running method make_builddir part of step ready
== 2024-04-07 21:16:30,584 easyblock.py:1062 INFO Overriding 'cleanupoldinstall' (to False), 'cleanupoldbuild' (to True) and 'keeppreviousinstall' because we're building in the installation directory.
== 2024-04-07 21:16:30,584 easyblock.py:1132 INFO Found old directory /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a
== 2024-04-07 21:16:30,584 filetools.py:384 INFO Path /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a successfully removed.
== 2024-04-07 21:16:30,584 easyblock.py:1140 INFO Removed old directory /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a
== 2024-04-07 21:16:30,584 filetools.py:1893 INFO Creating directory /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a (parents: True, set_gid: False, sticky: False)
== 2024-04-07 21:16:30,588 easyblock.py:3991 INFO Running method reset_env part of step ready
== 2024-04-07 21:16:30,588 easyblock.py:3991 INFO Running method handle_iterate_opts part of step ready
== 2024-04-07 21:16:30,588 easyconfig.py:1680 INFO Generating template values...
== 2024-04-07 21:16:30,589 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-04-07 21:16:30,589 mpi.py:298 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-04-07 21:16:30,589 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='openfoam', builddir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='openfoam', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', module_name='OpenFOAM/v2106-foss-2021a', mpi_cmd_prefix='mpirun -n 1', name='OpenFOAM', nameletter='O', nameletterlower='o', namelower='openfoam', parallel='24', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021a', version='v2106', version_major='v2106', versionprefix='', versionsuffix=''
== 2024-04-07 21:16:30,589 hooks.py:215 INFO Found post_ready_hook hook
== 2024-04-07 21:16:30,589 hooks.py:249 INFO Running 'post_ready_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:16:30,589 build_log.py:267 INFO ... (took < 1 sec)
== 2024-04-07 21:16:30,592 build_log.py:267 INFO unpacking...
== 2024-04-07 21:16:30,594 easyblock.py:3983 INFO Starting source step
== 2024-04-07 21:16:30,594 easyconfig.py:1680 INFO Generating template values...
== 2024-04-07 21:16:30,595 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-04-07 21:16:30,595 mpi.py:298 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-04-07 21:16:30,595 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='openfoam', builddir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='openfoam', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', module_name='OpenFOAM/v2106-foss-2021a', mpi_cmd_prefix='mpirun -n 1', name='OpenFOAM', nameletter='O', nameletterlower='o', namelower='openfoam', parallel='24', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021a', version='v2106', version_major='v2106', versionprefix='', versionsuffix=''
== 2024-04-07 21:16:30,595 hooks.py:215 INFO Found pre_source_hook hook
== 2024-04-07 21:16:30,595 hooks.py:249 INFO Running 'pre_source_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:16:30,785 easyblock.py:3991 INFO Running method checksum_step part of step source
== 2024-04-07 21:16:30,851 easyblock.py:2469 INFO Checksum verification for /rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz using 11e41e5b9a253ef592a8f6b79f6aded623b28308192d02cec1327078523b5a37 passed.
== 2024-04-07 21:16:30,851 easyblock.py:2469 INFO Checksum verification for /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2012-cleanup.patch using cdd2597a1ac1448e9bd33a364a8dfe17f51cc9ab5a8e0ab67cf92bba3ed9da43 passed.
== 2024-04-07 21:16:30,851 easyblock.py:2469 INFO Checksum verification for /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v1906-wmake-ompi.patch using 518e27683c5c41400cfbc17b31effa50b31b25916dccbf85b18b0b955f642505 passed.
== 2024-04-07 21:16:30,851 easyblock.py:3991 INFO Running method extract_step part of step source
== 2024-04-07 21:16:30,851 easyblock.py:2581 INFO Unpacking source OpenFOAM-v2106.tgz
== 2024-04-07 21:16:30,852 run.py:335 INFO run_cmd: Output of "tar xzf /rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz" will be logged to /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/run-shell-cmd-output/tar-ftjba0es/out.txt
== 2024-04-07 21:16:30,855 run.py:370 INFO Path to bash that will be used to run shell commands: /usr/bin/bash
== 2024-04-07 21:16:30,855 run.py:392 INFO Running shell command 'tar xzf /rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz' in /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a
== 2024-04-07 21:18:10,842 run.py:487 INFO Output of 'tar ...' shell command (stdout + stderr):
== 2024-04-07 21:18:10,842 run.py:490 INFO Shell command completed successfully (see output above): tar xzf /rds/projects/b/branfosj-bear-apps/sources/o/OpenFOAM/OpenFOAM-v2106.tgz
== 2024-04-07 21:18:10,918 hooks.py:215 INFO Found post_source_hook hook
== 2024-04-07 21:18:10,918 hooks.py:249 INFO Running 'post_source_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:18:10,918 build_log.py:267 INFO ... (took 1 min 40 secs)
== 2024-04-07 21:18:10,922 build_log.py:267 INFO patching...
== 2024-04-07 21:18:10,925 easyblock.py:3983 INFO Starting patch step
== 2024-04-07 21:18:10,925 easyconfig.py:1680 INFO Generating template values...
== 2024-04-07 21:18:10,925 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-04-07 21:18:10,925 mpi.py:298 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-04-07 21:18:10,925 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='openfoam', builddir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='openfoam', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', module_name='OpenFOAM/v2106-foss-2021a', mpi_cmd_prefix='mpirun -n 1', name='OpenFOAM', nameletter='O', nameletterlower='o', namelower='openfoam', parallel='24', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021a', version='v2106', version_major='v2106', versionprefix='', versionsuffix=''
== 2024-04-07 21:18:10,925 hooks.py:215 INFO Found pre_patch_hook hook
== 2024-04-07 21:18:10,925 hooks.py:249 INFO Running 'pre_patch_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:18:11,184 easyblock.py:3991 INFO Running method patch_step part of step patch
== 2024-04-07 21:18:11,185 easyblock.py:2599 INFO Applying patch OpenFOAM-v2012-cleanup.patch
== 2024-04-07 21:18:11,192 run.py:335 INFO run_cmd: Output of "patch -p1 -i /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2012-cleanup.patch" will be logged to /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/run-shell-cmd-output/patch-vsds1vv0/out.txt
== 2024-04-07 21:18:11,199 run.py:370 INFO Path to bash that will be used to run shell commands: /usr/bin/bash
== 2024-04-07 21:18:11,199 run.py:392 INFO Running shell command 'patch -p1 -i /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2012-cleanup.patch' in /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a/OpenFOAM-v2106
== 2024-04-07 21:18:11,212 run.py:487 INFO Output of 'patch ...' shell command (stdout + stderr):
patching file etc/prefs.sh
patching file etc/easybuild/config.sh/CGAL
patching file etc/easybuild/config.sh/FFTW
patching file etc/easybuild/config.sh/metis
patching file etc/easybuild/config.sh/readline
patching file etc/easybuild/config.sh/scotch
patching file etc/easybuild/config.sh/vtk
patching file etc/easybuild/config.sh/paraview
== 2024-04-07 21:18:11,212 run.py:490 INFO Shell command completed successfully (see output above): patch -p1 -i /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v2012-cleanup.patch
== 2024-04-07 21:18:11,212 easyblock.py:2599 INFO Applying patch OpenFOAM-v1906-wmake-ompi.patch
== 2024-04-07 21:18:11,217 run.py:335 INFO run_cmd: Output of "patch -p1 -i /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v1906-wmake-ompi.patch" will be logged to /dev/shm/branfosj/tmp-up-EL8/eb-3deol_5i/run-shell-cmd-output/patch-03lqsqrz/out.txt
== 2024-04-07 21:18:11,218 run.py:370 INFO Path to bash that will be used to run shell commands: /usr/bin/bash
== 2024-04-07 21:18:11,218 run.py:392 INFO Running shell command 'patch -p1 -i /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v1906-wmake-ompi.patch' in /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a/OpenFOAM-v2106
== 2024-04-07 21:18:11,224 run.py:487 INFO Output of 'patch ...' shell command (stdout + stderr):
patching file wmake/makefiles/info
Hunk #1 succeeded at 74 (offset 1 line).
== 2024-04-07 21:18:11,224 run.py:490 INFO Shell command completed successfully (see output above): patch -p1 -i /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs/o/OpenFOAM/OpenFOAM-v1906-wmake-ompi.patch
== 2024-04-07 21:18:11,224 hooks.py:215 INFO Found post_patch_hook hook
== 2024-04-07 21:18:11,224 hooks.py:249 INFO Running 'post_patch_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:18:11,224 build_log.py:267 INFO ... (took < 1 sec)
== 2024-04-07 21:18:11,228 build_log.py:267 INFO preparing...
== 2024-04-07 21:18:11,230 easyblock.py:3983 INFO Starting prepare step
== 2024-04-07 21:18:11,230 easyconfig.py:1680 INFO Generating template values...
== 2024-04-07 21:18:11,230 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-04-07 21:18:11,231 mpi.py:298 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-04-07 21:18:11,231 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='openfoam', builddir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='openfoam', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a', module_name='OpenFOAM/v2106-foss-2021a', mpi_cmd_prefix='mpirun -n 1', name='OpenFOAM', nameletter='O', nameletterlower='o', namelower='openfoam', parallel='24', start_dir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a/OpenFOAM-v2106', sysroot='', toolchain_name='foss', toolchain_version='2021a', version='v2106', version_major='v2106', versionprefix='', versionsuffix=''
== 2024-04-07 21:18:11,231 hooks.py:215 INFO Found pre_prepare_hook hook
== 2024-04-07 21:18:11,231 hooks.py:249 INFO Running 'pre_prepare_hook' hook function (args: [<easybuild.easyblocks.openfoam.EB_OpenFOAM object at 0x7f0639997da0>], keyword args: {})...
== 2024-04-07 21:18:11,422 easyblock.py:3991 INFO Running method prepare_step part of step prepare
== 2024-04-07 21:18:11,427 modules.py:611 INFO Checking whether Bison/3.7.6-GCCcore-10.3.0 exists...
== 2024-04-07 21:18:11,427 modules.py:616 INFO Module Bison/3.7.6-GCCcore-10.3.0 exists (found in list of available modules)
== 2024-04-07 21:18:11,427 modules.py:639 INFO Result for existence check of Bison/3.7.6-GCCcore-10.3.0 module: True
== 2024-04-07 21:18:11,427 modules.py:611 INFO Checking whether CMake/3.20.1-GCCcore-10.3.0 exists...
== 2024-04-07 21:18:11,427 modules.py:616 INFO Module CMake/3.20.1-GCCcore-10.3.0 exists (found in list of available modules)
== 2024-04-07 21:18:11,427 modules.py:639 INFO Result for existence check of CMake/3.20.1-GCCcore-10.3.0 module: True
== 2024-04-07 21:18:11,427 modules.py:611 INFO Checking whether flex/2.6.4-GCCcore-10.3.0 exists...
== 2024-04-07 21:18:11,427 modules.py:616 INFO Module flex/2.6.4-GCCcore-10.3.0 exists (found in list of available modules)
== 2024-04-07 21:18:11,427 modules.py:639 INFO Result for existence check of flex/2.6.4-GCCcore-10.3.0 module: True
== 2024-04-07 21:18:11,427 modules.py:611 INFO Checking whether libreadline/8.1-GCCcore-10.3.0 exists...
== 2024-04-07 21:18:11,428 modules.py:616 INFO Module libreadline/8.1-GCCcore-10.3.0 exists (found in list of available modules)
== 2024-04-07 21:18:11,428 modules.py:639 INFO Result for existence check of libreadline/8.1-GCCcore-10.3.0 module: True
== 2024-04-07 21:18:11,428 modules.py:611 INFO Checking whether ncurses/6.2-GCCcore-10.3.0 exists...
== 2024-04-07 21:18:11,428 modules.py:616 INFO Module ncurses/6.2-GCCcore-10.3.0 exists (found in list of available modules)
== 2024-04-07 21:18:11,428 modules.py:639 INFO Result for existence check of ncurses/6.2-GCCcore-10.3.0 module: True
== 2024-04-07 21:18:11,428 modules.py:611 INFO Checking whether METIS/5.1.0-GCCcore-10.3.0 exists...
== 2024-04-07 21:18:11,428 modules.py:616 INFO Module METIS/5.1.0-GCCcore-10.3.0 exists (found in list of available modules)
== 2024-04-07 21:18:11,428 modules.py:639 INFO Result for existence check of METIS/5.1.0-GCCcore-10.3.0 module: True
== 2024-04-07 21:18:11,428 modules.py:611 INFO Checking whether SCOTCH/6.1.0-gompi-2021a exists...
== 2024-04-07 21:18:11,428 modules.py:616 INFO Module SCOTCH/6.1.0-gompi-2021a exists (found in list of available modules)
== 2024-04-07 21:18:11,428 modules.py:639 INFO Result for existence check of SCOTCH/6.1.0-gompi-2021a module: True
== 2024-04-07 21:18:11,428 modules.py:611 INFO Checking whether CGAL/4.14.3-gompi-2021a exists...
== 2024-04-07 21:18:11,428 modules.py:616 INFO Module CGAL/4.14.3-gompi-2021a exists (found in list of available modules)
== 2024-04-07 21:18:11,428 modules.py:639 INFO Result for existence check of CGAL/4.14.3-gompi-2021a module: True
== 2024-04-07 21:18:11,428 modules.py:611 INFO Checking whether ParaView/5.9.1-foss-2021a-mpi exists...
== 2024-04-07 21:18:11,428 modules.py:616 INFO Module ParaView/5.9.1-foss-2021a-mpi exists (found in list of available modules)
== 2024-04-07 21:18:11,428 modules.py:639 INFO Result for existence check of ParaView/5.9.1-foss-2021a-mpi module: True
== 2024-04-07 21:18:11,428 modules.py:611 INFO Checking whether gnuplot/5.4.2-GCCcore-10.3.0 exists...
== 2024-04-07 21:18:11,429 modules.py:619 INFO Module gnuplot/5.4.2-GCCcore-10.3.0 not found in list of available modules, checking via 'module show'...
== 2024-04-07 21:18:11,429 run.py:392 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python show gnuplot/5.4.2-GCCcore-10.3.0' in /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/OpenFOAM/v2106-foss-2021a/OpenFOAM-v2106
== 2024-04-07 21:18:42,890 run.py:484 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only):
import os
os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "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";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "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";
os.environ["_ModuleTable009_"] = "dGFja0RlcHRoID0gMSwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gIm9wZW5tcGktZW52IiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0sClsic2x1cm0taGVscGVycyJdID0gewpmbiA9ICIvcmRzL2JlYXItYXBwcy9zeXN0ZW0vbW9kdWxlcy9zbHVybS1oZWxwZXJzL2xpdmUiLApmdWxsTmFtZSA9ICJzbHVybS1oZWxwZXJzL2xpdmUiLApsb2FkT3JkZXIgPSAyLApwcm9wVCA9IHt9LApzdGFja0RlcHRoID0gMSwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gInNsdXJtLWhlbHBlcnMiLAp3ViA9ICJebGl2ZS4qemZpbmFsIiwKfSwKfSwKbXBhdGhBID0gewoiL3Jkcy9wcm9qZWN0cy8yMDE3L2JyYW5mb3NqLXJzZS9lYXN5YnVpbGQvRUw4LWljZS9tb2R1bGVz";
os.environ["_ModuleTable010_"] = "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";
os.environ["_ModuleTable011_"] = "b2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo=";
os.environ["_ModuleTable_Sz_"] = "11";
_mlstatus = True
== 2024-04-07 21:18:42,890 run.py:485 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only):
== 2024-04-07 21:18:42,890 run.py:490 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python show gnuplot/5.4.2-GCCcore-10.3.0
== 2024-04-07 21:18:42,890 modules.py:632 INFO Module gnuplot/5.4.2-GCCcore-10.3.0 not found via module avail/show, checking whether it is a wrapper
== 2024-04-07 21:18:42,891 modules.py:639 INFO Result for existence check of gnuplot/5.4.2-GCCcore-10.3.0 module: False
== 2024-04-07 21:18:42,982 build_log.py:171 ERROR EasyBuild encountered an error (at easybuild/src/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): Missing modules for dependencies (use --robot?): gnuplot/5.4.2-GCCcore-10.3.0 (at easybuild/src/easybuild-framework/easybuild/tools/toolchain/toolchain.py:553 in _check_dependencies)
== 2024-04-07 21:18:42,982 build_log.py:267 INFO ... (took 31 secs)
== 2024-04-07 21:18:42,985 filetools.py:1984 INFO Removing lock /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_OpenFOAM_v2106-foss-2021a.lock...
== 2024-04-07 21:18:42,988 filetools.py:384 INFO Path /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_OpenFOAM_v2106-foss-2021a.lock successfully removed.
== 2024-04-07 21:18:42,988 filetools.py:1988 INFO Lock removed: /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_OpenFOAM_v2106-foss-2021a.lock
== 2024-04-07 21:18:42,988 easyblock.py:329 INFO Closing log for application name OpenFOAM version v2106
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