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branfosj/easybuild_test_report_22014_easybuilders_preasybuild-easyconfigs_20245812-UTC-09-58-55.md

Created December 12, 2024 09:58
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EasyBuild test report for easybuilders/easybuild-easyconfigs PR(s) #22014
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easybuild_test_report_22014_easybuilders_preasybuild-easyconfigs_20245812-UTC-09-58-55.md

Test report for PR(s) easybuilders/easybuild-easyconfigs#22014

Test result

Build succeeded for 2 out of 2 (1 easyconfigs in total)

Overview of tested easyconfigs (in order)

  • SUCCESS minimap2-2.26-GCCcore-12.3.0.eb
  • SUCCESS metaMDBG-1.1-GCCcore-12.3.0.eb

Time info

  • start: Thu, 12 Dec 2024 09:57:35 +0000 (UTC)
  • end: Thu, 12 Dec 2024 09:58:55 +0000 (UTC)

EasyBuild info

  • easybuild-framework version: 4.9.4
  • easybuild-easyblocks version: 4.9.4
  • command line:
eb --from-pr 22014 -Tur
  • full configuration (includes defaults):
--accept-eula-for='Intel-oneAPI,NVHPC,CUDA'
--accept-eula=''
--allow-loaded-modules='EasyBuild'
--buildpath='/dev/shm/branfosj-admin/build-2023a'
--check-ebroot-env-vars='warn'
--cleanup-builddir
--cleanup-easyconfigs
--cleanup-tmpdir
--color='auto'
--container-type='singularity'
--containerpath='/rds/homes/b/branfosj-admin/.local/easybuild/containers'
--default-opt-level='defaultopt'
--detect-loaded-modules='warn'
--disable-add-dummy-to-minimal-toolchains
--disable-add-system-to-minimal-toolchains
--disable-allow-modules-tool-mismatch
--disable-allow-use-as-root-and-accept-consequences
--disable-avail-cfgfile-constants
--disable-avail-easyconfig-constants
--disable-avail-easyconfig-licenses
--disable-avail-easyconfig-params
--disable-avail-easyconfig-templates
--disable-avail-hooks
--disable-avail-module-naming-schemes
--disable-avail-modules-tools
--disable-avail-repositories
--disable-backup-patched-files
--disable-check-conflicts
--disable-check-contrib
--disable-check-eb-deps
--disable-check-github
--disable-check-style
--disable-consider-archived-easyconfigs
--disable-container-build-image
--disable-containerize
--disable-copy-ec
--disable-debug
--disable-debug-lmod
--disable-devel
--disable-dry-run
--disable-dry-run-short
--disable-dump-autopep8
--disable-dump-env-script
--disable-enforce-checksums
--disable-experimental
--disable-extended-dry-run
--disable-fetch
--disable-fix-deprecated-easyconfigs
--disable-force
--disable-group-writable-installdir
--disable-hidden
--disable-ignore-checksums
--disable-ignore-index
--disable-ignore-locks
--disable-ignore-osdeps
--disable-ignore-test-failure
--disable-info
--disable-insecure-download
--disable-install-github-token
--disable-install-latest-eb-release
--disable-job
--disable-last-log
--disable-list-toolchains
--disable-logtostdout
--disable-minimal-toolchains
--disable-missing-modules
--disable-module-depends-on
--disable-module-extensions
--disable-module-only
--disable-new-branch-github
--disable-new-pr
--disable-package
--disable-parallel-extensions-install
--disable-pretend
--disable-preview-pr
--disable-quiet
--disable-read-only-installdir
--disable-rebuild
--disable-recursive-module-unload
--disable-regtest
--disable-remove-ghost-install-dirs
--disable-rpath
--disable-sanity-check-only
--disable-sequential
--disable-set-default-module
--disable-set-gid-bit
--disable-show-config
--disable-show-default-configfiles
--disable-show-default-moduleclasses
--disable-show-ec
--disable-show-full-config
--disable-show-system-info
--disable-silence-hook-trigger
--disable-skip
--disable-skip-extensions
--disable-skip-sanity-check
--disable-skip-test-cases
--disable-skip-test-step
--disable-sticky-bit
--disable-terse
--disable-try-ignore-versionsuffixes
--disable-try-update-deps
--disable-unit-testing-mode
--disable-update-modules-tool-cache
--disable-use-existing-modules
--disable-verify-easyconfig-filenames
--download-timeout='10'
--env-for-shebang='/usr/bin/env'
--envvars-user-modules='HOME'
--extended-dry-run-ignore-errors
--extra-source-urls=''
--filter-rpath-sanity-libs='libcuda.so,libcuda.so.1,libnvidia-ml.so,libnvidia-ml.so.1'
--fixed-installdir-naming-scheme
--from-pr='22014'
--generate-devel-module
--github-user='branfosj'
--hooks='/rds/projects/b/branfosj-bear-apps/apps_scripts/easybuild_hooks.py'
--ignore-dirs='.git,.svn'
--include-easyblocks-from-pr=''
--include-easyblocks='/rds/projects/b/branfosj-bear-apps/live/bear-eb/easyblocks/*.py,/rds/projects/b/branfosj-bear-apps/live/bear-eb/easyblocks/generic/*.py'
--include-module-naming-schemes=''
--include-toolchains=''
--index-max-age='604800'
--installpath='/rds/bear-apps/2023a/EL8-cas'
--job-backend='GC3Pie'
--job-eb-cmd='eb'
--job-max-jobs='0'
--job-max-walltime='24'
--job-output-dir='/rds/bear-apps/2023a'
--job-polling-interval='30.0'
--lib-lib64-symlink
--lib64-fallback-sanity-check
--lib64-lib-symlink
--local-var-naming-check='warn'
--logfile-format='easybuild,easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'
--map-toolchains
--max-fail-ratio-adjust-permissions='0.5'
--minimal-build-env='CC:gcc,CXX:g++'
--module-naming-scheme='EasyBuildMNS'
--module-syntax='Tcl'
--moduleclasses='base,ai,astro,bio,cae,chem,compiler,data,debugger,devel,geo,ide,lang,lib,math,mpi,numlib,perf,quantum,phys,system,toolchain,tools,vis'
--modules-footer='/rds/bear-apps/system/modules-inc/modules-footer-inc-noroot'
--modules-header='/rds/bear-apps/system/modules-inc/modules-header-inc'
--modules-tool-version-check
--modules-tool='Lmod'
--mpi-tests
--output-format='txt'
--output-style='auto'
--package-naming-scheme='EasyBuildPNS'
--package-release='1'
--package-tool-options=''
--package-tool='fpm'
--package-type='rpm'
--packagepath='/rds/homes/b/branfosj-admin/.local/easybuild/packages'
--pr-target-account='easybuilders'
--pr-target-branch='develop'
--pre-create-installdir
--repository='FileRepository'
--repositorypath='/rds/homes/b/branfosj-admin/.local/easybuild/ebfiles_repo'
--robot-paths='/rds/projects/b/branfosj-bear-apps/live/bear-eb/easyconfigs:'
--robot='/rds/projects/b/branfosj-bear-apps/live/bear-eb/easyconfigs:/rds/projects/b/branfosj-bear-apps/live/eb-venv-EL8/easybuild/easyconfigs'
--show-progress-bar
--silence-deprecation-warnings=''
--sourcepath='/rds/projects/b/branfosj-bear-apps/sources/'
--strict='warn'
--subdir-modules='modules'
--subdir-software='software'
--suffix-modules-path='all'
--test-report-env-filter='^SSH.*|USER|HOSTNAME|UID|.*COOKIE.*|.*LICENSE.*|.*LICENCE.*|EB_.*|SINGULARITY_.*|NAG_.*|LS.*'
--tmpdir='/dev/shm/branfosj-admin/tmp-2023a'
--trace
--upload-test-report
--use-ccache='False'
--use-f90cache='False'
--wait-on-lock-interval='60'
--wait-on-lock-limit='0'

System info

  • core count: 8
  • cpu arch: x86_64
  • cpu arch name: cascadelake
  • cpu model: Intel(R) Xeon(R) Gold 6248 CPU @ 2.50GHz
  • cpu speed: 3900.0
  • cpu vendor: Intel
  • gcc version: Using built-in specs.; COLLECT_GCC=gcc; COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper; OFFLOAD_TARGET_NAMES=nvptx-none; OFFLOAD_TARGET_DEFAULT=1; Target: x86_64-redhat-linux; Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl --disable-libmpx --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux; Thread model: posix; gcc version 8.5.0 20210514 (Red Hat 8.5.0-22) (GCC) ;
  • glibc version: 2.28
  • hostname: bear-pg0211u08b.bear.cluster
  • os name: RHEL
  • os type: Linux
  • os version: 8.6
  • platform name: x86_64-unknown-linux
  • python version: 3.6.8 (default, Sep 9 2024, 06:12:39) ; [GCC 8.5.0 20210514 (Red Hat 8.5.0-22)]
  • system gcc path: /usr/bin/gcc
  • system python path: /rds/projects/b/branfosj-bear-apps/live/eb-venv-EL8/bin/python
  • total memory: 193101

List of loaded modules

  • bb-variables/live
  • slurm-helpers/live
  • openmpi-env/live
  • bear-licences/live
  • bb-singularity-conf/live
  • bear-apps/2018b/live
  • bear-apps/2019a/live
  • bear-apps/2019b/live
  • bear-apps/handbuilt/2020
  • bear-apps/2020a/live
  • bear-apps/2020b/live
  • bear-apps/2021a/live
  • bear-apps/auto-load
  • bluebear/live
  • beardefault

Environment

ANSYSLI_SERVERS = 2325@lic-ansys.bham.ac.uk
APPTAINER_BIND = /rds,/castles,/scratch
APPTAINER_CACHEDIR = /scratch/branfosj-admin/container_data
APPTAINER_DOCKER_ARCHITECTURE = x86_64
APPTAINER_TMPDIR = /scratch/branfosj-admin/container_data
ARMCI_OPENIB_DEVICE = mlx5_0
BASH_ENV = /usr/share/lmod/lmod/init/bash
BASH_FUNC_ml%% = () {  eval "$($LMOD_DIR/ml_cmd "$@")"
}
BASH_FUNC_module%% = () {  if [ -z "${LMOD_SH_DBG_ON+x}" ]; then
 case "$-" in 
 *v*x*)
 __lmod_sh_dbg='vx'
 ;;
 *v*)
 __lmod_sh_dbg='v'
 ;;
 *x*)
 __lmod_sh_dbg='x'
 ;;
 esac;
 fi;
 if [ -n "${__lmod_sh_dbg:-}" ]; then
 set +$__lmod_sh_dbg;
 echo "Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output" 1>&2;
 fi;
 eval "$($LMOD_CMD shell "$@")" && eval "$(${LMOD_SETTARG_CMD:-:} -s sh)";
 __lmod_my_status=$?;
 if [ -n "${__lmod_sh_dbg:-}" ]; then
 echo "Shell debugging restarted" 1>&2;
 set -$__lmod_sh_dbg;
 fi;
 unset __lmod_sh_dbg;
 return $__lmod_my_status
}
BASH_FUNC_which%% = () {  ( alias;
 eval ${which_declare} ) | /usr/bin/which --tty-only --read-alias --read-functions --show-tilde --show-dot $@
}
BB_APPS_BASE = EL8-cas
BB_APPS_DATA = /rds/bear-apps/apps-data/
BB_CPU = cascadelake
BB_CPU_REAL = cascadelake
BB_EL8_CONTAINER_SYS_BINDS = /bin/sbatch,/usr/bin/squeue,/usr/bin/scancel,/usr/bin/sacct,/usr/bin/sacctmgr,/usr/bin/scontrol,/usr/bin/sinfo,/usr/lib64/slurm,/etc/slurm,/var/run/munge,/etc/profile.d/zz-99-default-bear-modules.sh
BB_EXAMPLES = /rds/bear-apps/EXAMPLES/
BB_FALLBACKCPU = haswell
BB_FALLBACK_APPS_BASE = EL8-has
BB_GPGPUS = 0
BB_IB_DETECTED = 1
BB_MACHINE = Metal
BB_OFED = 5.6.2.0.9
BB_OSBASE = EL8
EASYBUILD_ACCEPT_EULA_FOR = Intel-oneAPI,NVHPC,CUDA
EASYBUILD_BUILDPATH = /dev/shm/branfosj-admin/build-2023a
EASYBUILD_HOOKS = /rds/projects/b/branfosj-bear-apps/apps_scripts/easybuild_hooks.py
EASYBUILD_INCLUDE_EASYBLOCKS = /rds/projects/b/branfosj-bear-apps/live/bear-eb/easyblocks/*.py,/rds/projects/b/branfosj-bear-apps/live/bear-eb/easyblocks/generic/*.py
EASYBUILD_INSTALLPATH = /rds/bear-apps/2023a/EL8-cas
EASYBUILD_MODULES_FOOTER = /rds/bear-apps/system/modules-inc/modules-footer-inc-noroot
EASYBUILD_MODULES_HEADER = /rds/bear-apps/system/modules-inc/modules-header-inc
EASYBUILD_MODULES_TOOL = Lmod
EASYBUILD_MODULE_SYNTAX = Tcl
EASYBUILD_ROBOT_PATHS = /rds/projects/b/branfosj-bear-apps/live/bear-eb/easyconfigs:
EASYBUILD_SOURCEPATH = /rds/projects/b/branfosj-bear-apps/sources/
EASYBUILD_TEST_REPORT_ENV_FILTER = ^SSH.*|USER|HOSTNAME|UID|.*COOKIE.*|.*LICENSE.*|.*LICENCE.*|EB_.*|SINGULARITY_.*|NAG_.*|LS.*
EASYBUILD_TMPDIR = /dev/shm/branfosj-admin/tmp-2023a
EDITOR = /usr/bin/vim
FANCYLOGGER_IGNORE_MPI4PY = 1
FPATH = /usr/share/lmod/lmod/init/ksh_funcs
HISTCONTROL = ignoredups
HISTFILESIZE = 1000000
HISTSIZE = 1000000
HISTTIMEFORMAT = %F %T 
HOME = /rds/homes/b/branfosj-admin
LANG = en_GB.UTF-8
LESSOPEN = ||/usr/bin/lesspipe.sh %s
LIBGL_ALWAYS_INDIRECT = y
LMOD_AUTO_SWAP = no
LMOD_CACHED_LOADS = no
LMOD_CMD = /usr/share/lmod/lmod/libexec/lmod
LMOD_DIR = /usr/share/lmod/lmod/libexec
LMOD_DISABLE_NAME_AUTOSWAP = yes
LMOD_DISABLE_SAME_NAME_AUTOSWAP = yes
LMOD_PKG = /usr/share/lmod/lmod
LMOD_ROOT = /usr/share/lmod
LMOD_SETTARG_FULL_SUPPORT = no
LMOD_SHORT_TIME = 86400
LMOD_SITE_MSG_FILE = /rds/bear-apps/system/software/lmod/lmod-messages.lua
LMOD_SYSTEM_DEFAULT_MODULES = beardefault
LMOD_VERSION = 8.7.53
LMOD_sys = Linux
LOADEDMODULES = bb-variables/live:slurm-helpers/live:openmpi-env/live:bear-licences/live:bb-singularity-conf/live:bear-apps/2018b/live:bear-apps/2019a/live:bear-apps/2019b/live:bear-apps/handbuilt/2020:bear-apps/2020a/live:bear-apps/2020b/live:bear-apps/2021a/live:bear-apps/auto-load:bluebear/live:beardefault
LOGNAME = branfosj-admin
MAIL = /var/spool/mail/branfosj-admin
MANPATH = /usr/share/lmod/lmod/share/man:
MODULEPATH = /rds/bear-apps/2023a/EL8-cas/modules:/rds/bear-apps/2023a/EL8-cas/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules
MODULEPATH_ROOT = /usr/share/modulefiles
MODULESHOME = /usr/share/lmod/lmod
OLDPWD = /rds/bear-apps/2023a
OMPI_MCA_btl = ^openib,ofi
OMPI_MCA_btl_openib_if_include = mlx5_0:1
OMPI_MCA_btl_tcp_if_exclude = 169.0.0.0/8,147.188.0.0/16
OMPI_MCA_mtl = ^ofi
OMP_NUM_THREADS = 1
PATH = /rds/projects/b/branfosj-bear-apps/live/eb-venv-EL8/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/jobs/:/usr/lpp/mmfs/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/jobs/:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj-admin/.local/bin:/rds/homes/b/branfosj-admin/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch
PWD = /rds/bear-apps/2023a
PYTHONOPTIMIZE = 1
SHELL = /bin/bash
SHLVL = 2
SLURM_JOB_ID = 15983769
SQUEUE_FORMAT = %.18i %.9q %.10u %.35j %.2t %.10l %.10M %.6D %.20V %.20S %.20b %R
SYS_TYPE = cascadelake-EL8
TERM = screen
UCX_NET_DEVICES = mlx5_0:1
VIRTUAL_ENV = /rds/projects/b/branfosj-bear-apps/live/eb-venv-EL8
XAUTHORITY = /rds/homes/b/branfosj-admin/.Xauthority
_ = /rds/projects/b/branfosj-bear-apps/live/eb-venv-EL8/bin/python
_LMFILES_ = /rds/bear-apps/system/modules/bb-variables/live:/rds/bear-apps/system/modules/slurm-helpers/live:/rds/bear-apps/system/modules/openmpi-env/live:/rds/bear-apps/system/modules/bear-licences/live:/rds/bear-apps/system/modules/bb-singularity-conf/live:/rds/bear-apps/system/modules/bear-apps/2018b/live:/rds/bear-apps/system/modules/bear-apps/2019a/live:/rds/bear-apps/system/modules/bear-apps/2019b/live:/rds/bear-apps/system/modules/bear-apps/handbuilt/2020:/rds/bear-apps/system/modules/bear-apps/2020a/live:/rds/bear-apps/system/modules/bear-apps/2020b/live:/rds/bear-apps/system/modules/bear-apps/2021a/live:/rds/bear-apps/system/modules/bear-apps/auto-load:/rds/bear-apps/system/modules/bluebear/live:/rds/bear-apps/system/modules/beardefault.lua
_ModuleTable001_ = 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
_ModuleTable002_ = 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
_ModuleTable003_ = 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__Init_Default_Modules = 1
__LMOD_REF_COUNT_MODULEPATH = /rds/bear-apps/2023a/EL8-cas/modules:1;/rds/bear-apps/2023a/EL8-cas/modules/all:1;/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1;/rds/bear-apps/system/modules:1
__LMOD_REF_COUNT_PATH = /rds/bear-apps/bin:1;/rds/bear-apps/system/software/slurm-helpers:1;/usr/lpp/mmfs/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1
version = 2023a
which_declare = declare -f
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