Created
May 8, 2024 15:52
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(partial) EasyBuild log for failed build of /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-12.0.1-GCCcore-12.2.0.eb (PR(s) #20496)
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| == 2024-05-08 16:52:34,486 easyconfig.py:1680 INFO Generating template values... | |
| == 2024-05-08 16:52:34,486 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', cudamajver='12', cudaminver='0', cudashortver='12.0', cudaver='12.0.0', github_account='psm2', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0', module_name='PSM2/12.0.1-GCCcore-12.2.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.2.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
| == 2024-05-08 16:52:34,486 hooks.py:215 INFO Found pre_fetch_hook hook | |
| == 2024-05-08 16:52:34,486 hooks.py:249 INFO Running 'pre_fetch_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:34,880 easyblock.py:2238 INFO Number of iterations to perform for central part of installation procedure: 1 | |
| == 2024-05-08 16:52:35,287 easyblock.py:3987 INFO Running method fetch_step part of step fetch | |
| == 2024-05-08 16:52:35,287 easyblock.py:2360 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
| == 2024-05-08 16:52:35,287 easyblock.py:800 INFO Considering directory in which easyconfig file is located when searching for PSM2_12.0.1.tar.gz: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2 | |
| == 2024-05-08 16:52:35,287 tools.py:273 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin/eb | |
| == 2024-05-08 16:52:35,287 tools.py:289 INFO Not considering /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8 (no easybuild/easyconfigs subdir found) | |
| == 2024-05-08 16:52:35,288 easyblock.py:841 INFO Found file PSM2_12.0.1.tar.gz at /rds/projects/b/branfosj-bear-apps/sources/p/PSM2/PSM2_12.0.1.tar.gz | |
| == 2024-05-08 16:52:35,288 easyblock.py:497 INFO Added sources: [{'name': 'PSM2_12.0.1.tar.gz', 'path': '/rds/projects/b/branfosj-bear-apps/sources/p/PSM2/PSM2_12.0.1.tar.gz', 'cmd': None, 'checksum': 'e41af2d7d36a6ab67639ecbd5c1012aa20b2b464bf5cfbdac60e7eb37bfe58de', 'finalpath': '/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0'}] | |
| == 2024-05-08 16:52:35,288 easyblock.py:800 INFO Considering directory in which easyconfig file is located when searching for PSM2-11.2.80_hfi-user.patch: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2 | |
| == 2024-05-08 16:52:35,288 tools.py:273 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin/eb | |
| == 2024-05-08 16:52:35,288 tools.py:289 INFO Not considering /rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8 (no easybuild/easyconfigs subdir found) | |
| == 2024-05-08 16:52:35,288 easyblock.py:841 INFO Found file PSM2-11.2.80_hfi-user.patch at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch | |
| == 2024-05-08 16:52:35,288 easyblock.py:536 INFO Added patches: [{'name': 'PSM2-11.2.80_hfi-user.patch', 'level': 1, 'postinstall': False, 'path': '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch', 'checksum': '7c97f9dc3b2a6f0e5b5d80abca87d44771f03c0895fa363229398de6df4b0884'}] | |
| == 2024-05-08 16:52:35,289 easyblock.py:2412 INFO sha256 checksum for /rds/projects/b/branfosj-bear-apps/sources/p/PSM2/PSM2_12.0.1.tar.gz: e41af2d7d36a6ab67639ecbd5c1012aa20b2b464bf5cfbdac60e7eb37bfe58de | |
| == 2024-05-08 16:52:35,289 easyblock.py:2412 INFO sha256 checksum for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch: 7c97f9dc3b2a6f0e5b5d80abca87d44771f03c0895fa363229398de6df4b0884 | |
| == 2024-05-08 16:52:35,298 easyblock.py:2447 INFO Checking dirs that need to be created: ['/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0', '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/PSM2', '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/lib/PSM2'] | |
| == 2024-05-08 16:52:35,298 filetools.py:1897 INFO Creating directory /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0 (parents: True, set_gid: False, sticky: False) | |
| == 2024-05-08 16:52:35,299 configuremake.py:96 INFO config.guess version: 2023-08-22 (last updated: 2024-01-04T16:23:23.632618, SHA256 checksum: ec2577614252326f889df1de97b9a457c03a9a94811048563c211a44496d8ba3) | |
| == 2024-05-08 16:52:35,299 configuremake.py:151 INFO Found config.guess at /rds/projects/b/branfosj-bear-apps/sources/generic/eb_v5.0.0.dev0/ConfigureMake/config.guess | |
| == 2024-05-08 16:52:35,300 hooks.py:215 INFO Found post_fetch_hook hook | |
| == 2024-05-08 16:52:35,300 hooks.py:249 INFO Running 'post_fetch_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:35,300 build_log.py:267 INFO ... (took < 1 sec) | |
| == 2024-05-08 16:52:35,302 build_log.py:267 INFO creating build dir, resetting environment... | |
| == 2024-05-08 16:52:35,303 easyblock.py:3979 INFO Starting ready step | |
| == 2024-05-08 16:52:35,303 easyconfig.py:1680 INFO Generating template values... | |
| == 2024-05-08 16:52:35,304 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', cudamajver='12', cudaminver='0', cudashortver='12.0', cudaver='12.0.0', github_account='psm2', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0', module_name='PSM2/12.0.1-GCCcore-12.2.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.2.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
| == 2024-05-08 16:52:35,304 hooks.py:215 INFO Found pre_ready_hook hook | |
| == 2024-05-08 16:52:35,304 hooks.py:249 INFO Running 'pre_ready_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:35,517 easyblock.py:3987 INFO Running method check_readiness_step part of step ready | |
| == 2024-05-08 16:52:35,517 easyblock.py:2257 INFO Setting parallelism: 8 | |
| == 2024-05-08 16:52:35,517 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python --terse list' in /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs | |
| == 2024-05-08 16:52:35,567 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
| import os | |
| os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "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"; | |
| os.environ["_ModuleTable004_"] = "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"; | |
| os.environ["_ModuleTable005_"] = "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"; | |
| os.environ["_ModuleTable006_"] = "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"; | |
| os.environ["_ModuleTable007_"] = "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"; | |
| os.environ["_ModuleTable008_"] = "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"; | |
| os.environ["_ModuleTable009_"] = "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"; | |
| os.environ["_ModuleTable010_"] = "L2FsbCIsICIvcmRzL3Byb2plY3RzLzIwMTcvYnJhbmZvc2otcnNlL2Vhc3lidWlsZC9FTDgtaWNlL21vZHVsZXMiLCAiL2V0Yy9tb2R1bGVmaWxlcyIsICIvdXNyL3NoYXJlL21vZHVsZWZpbGVzIiwgIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvTGludXgiCiwgIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsICIvdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIiwgIi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfSwKc3lzdGVtQmFzZU1QQVRIID0gIi9ldGMvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xt"; | |
| os.environ["_ModuleTable011_"] = "b2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
| os.environ["_ModuleTable_Sz_"] = "11"; | |
| _mlstatus = True | |
| == 2024-05-08 16:52:35,567 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
| bb-variables/live | |
| slurm-helpers/live | |
| openmpi-env/live | |
| bear-licences/live | |
| bb-singularity-conf/live | |
| bear-apps/2018b/live | |
| bear-apps/2019a/live | |
| bear-apps/2019b/live | |
| bear-apps/handbuilt/2020 | |
| bear-apps/2020a/live | |
| bear-apps/2020b/live | |
| bear-apps/2021a/live | |
| bear-apps/auto-load | |
| bluebear/live | |
| == 2024-05-08 16:52:35,567 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python --terse list | |
| == 2024-05-08 16:52:35,567 easyblock.py:2309 WARNING Loaded modules detected: ['bb-variables/live', 'slurm-helpers/live', 'openmpi-env/live', 'bear-licences/live', 'bb-singularity-conf/live', 'bear-apps/2018b/live', 'bear-apps/2019a/live', 'bear-apps/2019b/live', 'bear-apps/handbuilt/2020', 'bear-apps/2020a/live', 'bear-apps/2020b/live', 'bear-apps/2021a/live', 'bear-apps/auto-load', 'bluebear/live'] | |
| == 2024-05-08 16:52:35,568 easyblock.py:3987 INFO Running method make_builddir part of step ready | |
| == 2024-05-08 16:52:35,568 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0 (parents: True, set_gid: False, sticky: False) | |
| == 2024-05-08 16:52:35,570 easyblock.py:3987 INFO Running method reset_env part of step ready | |
| == 2024-05-08 16:52:35,571 easyblock.py:3987 INFO Running method handle_iterate_opts part of step ready | |
| == 2024-05-08 16:52:35,571 easyconfig.py:1680 INFO Generating template values... | |
| == 2024-05-08 16:52:35,571 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', cudamajver='12', cudaminver='0', cudashortver='12.0', cudaver='12.0.0', github_account='psm2', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0', module_name='PSM2/12.0.1-GCCcore-12.2.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='8', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.2.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
| == 2024-05-08 16:52:35,571 hooks.py:215 INFO Found post_ready_hook hook | |
| == 2024-05-08 16:52:35,571 hooks.py:249 INFO Running 'post_ready_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:35,571 build_log.py:267 INFO ... (took < 1 sec) | |
| == 2024-05-08 16:52:35,573 build_log.py:267 INFO unpacking... | |
| == 2024-05-08 16:52:35,575 easyblock.py:3979 INFO Starting source step | |
| == 2024-05-08 16:52:35,575 easyconfig.py:1680 INFO Generating template values... | |
| == 2024-05-08 16:52:35,575 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', cudamajver='12', cudaminver='0', cudashortver='12.0', cudaver='12.0.0', github_account='psm2', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0', module_name='PSM2/12.0.1-GCCcore-12.2.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='8', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.2.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
| == 2024-05-08 16:52:35,575 hooks.py:215 INFO Found pre_source_hook hook | |
| == 2024-05-08 16:52:35,575 hooks.py:249 INFO Running 'pre_source_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:35,816 easyblock.py:3987 INFO Running method checksum_step part of step source | |
| == 2024-05-08 16:52:35,817 easyblock.py:2465 INFO Checksum verification for /rds/projects/b/branfosj-bear-apps/sources/p/PSM2/PSM2_12.0.1.tar.gz using e41af2d7d36a6ab67639ecbd5c1012aa20b2b464bf5cfbdac60e7eb37bfe58de passed. | |
| == 2024-05-08 16:52:35,817 easyblock.py:2465 INFO Checksum verification for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch using 7c97f9dc3b2a6f0e5b5d80abca87d44771f03c0895fa363229398de6df4b0884 passed. | |
| == 2024-05-08 16:52:35,817 easyblock.py:3987 INFO Running method extract_step part of step source | |
| == 2024-05-08 16:52:35,817 easyblock.py:2577 INFO Unpacking source PSM2_12.0.1.tar.gz | |
| == 2024-05-08 16:52:35,817 run.py:339 INFO run_shell_cmd: Output of "tar xzf /rds/projects/b/branfosj-bear-apps/sources/p/PSM2/PSM2_12.0.1.tar.gz" will be logged to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/run-shell-cmd-output/tar-sgeslc2e/out.txt | |
| == 2024-05-08 16:52:35,820 run.py:374 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-05-08 16:52:35,820 run.py:396 INFO Running shell command 'tar xzf /rds/projects/b/branfosj-bear-apps/sources/p/PSM2/PSM2_12.0.1.tar.gz' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0 | |
| == 2024-05-08 16:52:35,835 run.py:499 INFO Output of 'tar ...' shell command (stdout + stderr): | |
| == 2024-05-08 16:52:35,835 run.py:502 INFO Shell command completed successfully (see output above): tar xzf /rds/projects/b/branfosj-bear-apps/sources/p/PSM2/PSM2_12.0.1.tar.gz | |
| == 2024-05-08 16:52:35,838 hooks.py:215 INFO Found post_source_hook hook | |
| == 2024-05-08 16:52:35,838 hooks.py:249 INFO Running 'post_source_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:35,838 build_log.py:267 INFO ... (took < 1 sec) | |
| == 2024-05-08 16:52:35,840 build_log.py:267 INFO patching... | |
| == 2024-05-08 16:52:35,842 easyblock.py:3979 INFO Starting patch step | |
| == 2024-05-08 16:52:35,842 easyconfig.py:1680 INFO Generating template values... | |
| == 2024-05-08 16:52:35,842 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', cudamajver='12', cudaminver='0', cudashortver='12.0', cudaver='12.0.0', github_account='psm2', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0', module_name='PSM2/12.0.1-GCCcore-12.2.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='8', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.2.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
| == 2024-05-08 16:52:35,842 hooks.py:215 INFO Found pre_patch_hook hook | |
| == 2024-05-08 16:52:35,842 hooks.py:249 INFO Running 'pre_patch_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:36,043 easyblock.py:3987 INFO Running method patch_step part of step patch | |
| == 2024-05-08 16:52:36,043 easyblock.py:2595 INFO Applying patch PSM2-11.2.80_hfi-user.patch | |
| == 2024-05-08 16:52:36,045 run.py:339 INFO run_shell_cmd: Output of "patch -p1 -i /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch" will be logged to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/run-shell-cmd-output/patch-211rzfrq/out.txt | |
| == 2024-05-08 16:52:36,045 run.py:374 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-05-08 16:52:36,046 run.py:396 INFO Running shell command 'patch -p1 -i /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 | |
| == 2024-05-08 16:52:36,050 run.py:499 INFO Output of 'patch ...' shell command (stdout + stderr): | |
| patching file include/rdma/hfi/hfi1_ioctl.h | |
| patching file include/rdma/hfi/hfi1_user.h | |
| patching file include/rdma/ib_user_mad.h | |
| patching file include/rdma/rdma_user_ioctl.h | |
| == 2024-05-08 16:52:36,050 run.py:502 INFO Shell command completed successfully (see output above): patch -p1 -i /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch | |
| == 2024-05-08 16:52:36,050 hooks.py:215 INFO Found post_patch_hook hook | |
| == 2024-05-08 16:52:36,050 hooks.py:249 INFO Running 'post_patch_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:36,050 build_log.py:267 INFO ... (took < 1 sec) | |
| == 2024-05-08 16:52:36,053 build_log.py:267 INFO preparing... | |
| == 2024-05-08 16:52:36,055 easyblock.py:3979 INFO Starting prepare step | |
| == 2024-05-08 16:52:36,055 easyconfig.py:1680 INFO Generating template values... | |
| == 2024-05-08 16:52:36,055 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', cudamajver='12', cudaminver='0', cudashortver='12.0', cudaver='12.0.0', github_account='psm2', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0', module_name='PSM2/12.0.1-GCCcore-12.2.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='8', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.2.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
| == 2024-05-08 16:52:36,055 hooks.py:215 INFO Found pre_prepare_hook hook | |
| == 2024-05-08 16:52:36,055 hooks.py:249 INFO Running 'pre_prepare_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:36,282 easyblock.py:3987 INFO Running method prepare_step part of step prepare | |
| == 2024-05-08 16:52:36,284 modules.py:611 INFO Checking whether CUDA/12.0.0 exists... | |
| == 2024-05-08 16:52:36,284 modules.py:616 INFO Module CUDA/12.0.0 exists (found in list of available modules) | |
| == 2024-05-08 16:52:36,284 modules.py:639 INFO Result for existence check of CUDA/12.0.0 module: True | |
| == 2024-05-08 16:52:36,284 modules.py:611 INFO Checking whether numactl/2.0.16-GCCcore-12.2.0 exists... | |
| == 2024-05-08 16:52:36,284 modules.py:616 INFO Module numactl/2.0.16-GCCcore-12.2.0 exists (found in list of available modules) | |
| == 2024-05-08 16:52:36,284 modules.py:639 INFO Result for existence check of numactl/2.0.16-GCCcore-12.2.0 module: True | |
| == 2024-05-08 16:52:36,284 modules.py:611 INFO Checking whether GCCcore/12.2.0 exists... | |
| == 2024-05-08 16:52:36,284 modules.py:619 INFO Module GCCcore/12.2.0 not found in list of available modules, checking via 'module show'... | |
| == 2024-05-08 16:52:36,284 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python show GCCcore/12.2.0' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 | |
| == 2024-05-08 16:52:37,320 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
| import os | |
| os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
| os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXyA9IHsKTVR2ZXJzaW9uID0gMywKY19yZWJ1aWxkVGltZSA9IDcyMDAuMCwKY19zaG9ydFRpbWUgPSAwLjI0NTE2ODkyNDMzMTY3LApkZXB0aFQgPSB7fSwKZmFtaWx5ID0ge30sCm1UID0gewpbImJiLXNpbmd1bGFyaXR5LWNvbmYiXSA9IHsKZm4gPSAiL3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMvYmItc2luZ3VsYXJpdHktY29uZi9saXZlIiwKZnVsbE5hbWUgPSAiYmItc2luZ3VsYXJpdHktY29uZi9saXZlIiwKbG9hZE9yZGVyID0gNSwKcHJvcFQgPSB7fSwKc3RhY2tEZXB0aCA9IDEsCnN0YXR1cyA9ICJhY3RpdmUiLAp1c2VyTmFtZSA9ICJiYi1zaW5ndWxhcml0eS1jb25mIiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0sClsiYmItdmFyaWFi"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "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"; | |
| os.environ["_ModuleTable004_"] = "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"; | |
| os.environ["_ModuleTable005_"] = "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"; | |
| os.environ["_ModuleTable006_"] = "dGFja0RlcHRoID0gMiwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gImJlYXItYXBwcy8yMDIxYSIsCndWID0gIl5saXZlLip6ZmluYWwiLAp9LApbImJlYXItYXBwcy9hdXRvLWxvYWQiXSA9IHsKZm4gPSAiL3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMvYmVhci1hcHBzL2F1dG8tbG9hZCIsCmZ1bGxOYW1lID0gImJlYXItYXBwcy9hdXRvLWxvYWQiLApsb2FkT3JkZXIgPSAxMywKcHJvcFQgPSB7fSwKc3RhY2tEZXB0aCA9IDEsCnN0YXR1cyA9ICJhY3RpdmUiLAp1c2VyTmFtZSA9ICJiZWFyLWFwcHMvYXV0by1sb2FkIiwKd1YgPSAiTS4qemZpbmFsIiwKfSwKWyJiZWFyLWFwcHMvaGFuZGJ1aWx0Il0gPSB7CmZuID0gIi9yZHMvYmVhci1hcHBzL3N5c3RlbS9t"; | |
| os.environ["_ModuleTable007_"] = "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"; | |
| os.environ["_ModuleTable008_"] = "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"; | |
| os.environ["_ModuleTable009_"] = "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"; | |
| os.environ["_ModuleTable010_"] = "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"; | |
| os.environ["_ModuleTable011_"] = "b2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
| os.environ["_ModuleTable_Sz_"] = "11"; | |
| _mlstatus = True | |
| == 2024-05-08 16:52:37,320 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
| ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/GCCcore/12.2.0.lua: | |
| ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| help([[ | |
| Description | |
| =========== | |
| The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, | |
| as well as libraries for these languages (libstdc++, libgcj,...). | |
| More information | |
| ================ | |
| - Homepage: https://gcc.gnu.org/ | |
| ]]) | |
| whatis("Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, | |
| as well as libraries for these languages (libstdc++, libgcj,...).") | |
| whatis("Homepage: https://gcc.gnu.org/") | |
| whatis("URL: https://gcc.gnu.org/") | |
| conflict("GCCcore") | |
| prepend_path("CMAKE_LIBRARY_PATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64") | |
| prepend_path("CMAKE_PREFIX_PATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0") | |
| prepend_path("LD_LIBRARY_PATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64") | |
| prepend_path("MANPATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share/man") | |
| prepend_path("PATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin") | |
| prepend_path("XDG_DATA_DIRS","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share") | |
| setenv("EBROOTGCCCORE","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0") | |
| setenv("EBVERSIONGCCCORE","12.2.0") | |
| setenv("EBDEVELGCCCORE","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/easybuild/GCCcore-12.2.0-easybuild-devel") | |
| == 2024-05-08 16:52:37,320 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python show GCCcore/12.2.0 | |
| == 2024-05-08 16:52:37,321 modules.py:639 INFO Result for existence check of GCCcore/12.2.0 module: True | |
| == 2024-05-08 16:52:37,323 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python --terse list' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 | |
| == 2024-05-08 16:52:37,372 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
| import os | |
| os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "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"; | |
| os.environ["_ModuleTable004_"] = "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"; | |
| os.environ["_ModuleTable005_"] = "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"; | |
| os.environ["_ModuleTable006_"] = "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"; | |
| os.environ["_ModuleTable007_"] = "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"; | |
| os.environ["_ModuleTable008_"] = "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"; | |
| os.environ["_ModuleTable009_"] = "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"; | |
| os.environ["_ModuleTable010_"] = "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"; | |
| os.environ["_ModuleTable011_"] = "b2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
| os.environ["_ModuleTable_Sz_"] = "11"; | |
| _mlstatus = True | |
| == 2024-05-08 16:52:37,372 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
| bb-variables/live | |
| slurm-helpers/live | |
| openmpi-env/live | |
| bear-licences/live | |
| bb-singularity-conf/live | |
| bear-apps/2018b/live | |
| bear-apps/2019a/live | |
| bear-apps/2019b/live | |
| bear-apps/handbuilt/2020 | |
| bear-apps/2020a/live | |
| bear-apps/2020b/live | |
| bear-apps/2021a/live | |
| bear-apps/auto-load | |
| bluebear/live | |
| == 2024-05-08 16:52:37,372 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python --terse list | |
| == 2024-05-08 16:52:37,373 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python load GCCcore/12.2.0' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 | |
| == 2024-05-08 16:52:38,393 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
| import os | |
| os.environ["__LMOD_REF_COUNT_CMAKE_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64:1"; | |
| os.environ["CMAKE_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64"; | |
| os.environ["__LMOD_REF_COUNT_CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0:1"; | |
| os.environ["CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0"; | |
| os.environ["EBDEVELGCCCORE"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/easybuild/GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBROOTGCCCORE"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0"; | |
| os.environ["EBVERSIONGCCCORE"] = "12.2.0"; | |
| os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64:1"; | |
| os.environ["LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64"; | |
| os.environ["LOADEDMODULES"] = "bb-variables/live:slurm-helpers/live:openmpi-env/live:bear-licences/live:bb-singularity-conf/live:bear-apps/2018b/live:bear-apps/2019a/live:bear-apps/2019b/live:bear-apps/handbuilt/2020:bear-apps/2020a/live:bear-apps/2020b/live:bear-apps/2021a/live:bear-apps/auto-load:bluebear/live:GCCcore/12.2.0"; | |
| os.environ["__LMOD_REF_COUNT_MANPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share/man:1;/usr/share/lmod/lmod/share/man:1;:1"; | |
| os.environ["MANPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share/man:/usr/share/lmod/lmod/share/man::"; | |
| os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
| os.environ["__LMOD_REF_COUNT_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:1;/rds/bear-apps/bin:2;/rds/bear-apps/system/software/slurm-helpers:1;/rds/homes/b/branfosj/.yarn/bin:1;/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:1;/usr/lpp/mmfs/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1;/rds/homes/b/branfosj/.local/bin:1;/rds/homes/b/branfosj/bin:1;/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:2;/rds/projects/b/branfosj-bear-apps/apps_scripts:1"; | |
| os.environ["PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts"; | |
| os.environ["__LMOD_REF_COUNT_XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share:1"; | |
| os.environ["XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share"; | |
| os.environ["_LMFILES_"] = "/rds/bear-apps/system/modules/bb-variables/live:/rds/bear-apps/system/modules/slurm-helpers/live:/rds/bear-apps/system/modules/openmpi-env/live:/rds/bear-apps/system/modules/bear-licences/live:/rds/bear-apps/system/modules/bb-singularity-conf/live:/rds/bear-apps/system/modules/bear-apps/2018b/live:/rds/bear-apps/system/modules/bear-apps/2019a/live:/rds/bear-apps/system/modules/bear-apps/2019b/live:/rds/bear-apps/system/modules/bear-apps/handbuilt/2020:/rds/bear-apps/system/modules/bear-apps/2020a/live:/rds/bear-apps/system/modules/bear-apps/2020b/live:/rds/bear-apps/system/modules/bear-apps/2021a/live:/rds/bear-apps/system/modules/bear-apps/auto-load:/rds/bear-apps/system/modules/bluebear/live:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/GCCcore/12.2.0.lua"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "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"; | |
| os.environ["_ModuleTable004_"] = "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"; | |
| os.environ["_ModuleTable005_"] = "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"; | |
| os.environ["_ModuleTable006_"] = "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"; | |
| os.environ["_ModuleTable007_"] = "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"; | |
| os.environ["_ModuleTable008_"] = "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"; | |
| os.environ["_ModuleTable009_"] = "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"; | |
| os.environ["_ModuleTable010_"] = "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"; | |
| os.environ["_ModuleTable011_"] = "cmUvbW9kdWxlZmlsZXMvTGludXgiCiwgIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsICIvdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIiwgIi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfSwKc3lzdGVtQmFzZU1QQVRIID0gIi9ldGMvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
| os.environ["_ModuleTable_Sz_"] = "11"; | |
| _mlstatus = True | |
| == 2024-05-08 16:52:38,393 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
| == 2024-05-08 16:52:38,393 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python load GCCcore/12.2.0 | |
| == 2024-05-08 16:52:38,395 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python --terse list' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 | |
| == 2024-05-08 16:52:38,445 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
| import os | |
| os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "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"; | |
| os.environ["_ModuleTable004_"] = "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"; | |
| os.environ["_ModuleTable005_"] = "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"; | |
| os.environ["_ModuleTable006_"] = "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"; | |
| os.environ["_ModuleTable007_"] = "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"; | |
| os.environ["_ModuleTable008_"] = "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"; | |
| os.environ["_ModuleTable009_"] = "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"; | |
| os.environ["_ModuleTable010_"] = "YXBwcy9zeXN0ZW0vbW9kdWxlcy9zbHVybS1oZWxwZXJzL2xpdmUiLApmdWxsTmFtZSA9ICJzbHVybS1oZWxwZXJzL2xpdmUiLApsb2FkT3JkZXIgPSAyLApwcm9wVCA9IHt9LApzdGFja0RlcHRoID0gMSwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gInNsdXJtLWhlbHBlcnMiLAp3ViA9ICJebGl2ZS4qemZpbmFsIiwKfSwKfSwKbXBhdGhBID0gewoiL3Jkcy9wcm9qZWN0cy8yMDE3L2JyYW5mb3NqLXJzZS9lYXN5YnVpbGQvRUw4LWljZS9tb2R1bGVzL2FsbCIsICIvcmRzL3Byb2plY3RzLzIwMTcvYnJhbmZvc2otcnNlL2Vhc3lidWlsZC9FTDgtaWNlL21vZHVsZXMiLCAiL2V0Yy9tb2R1bGVmaWxlcyIsICIvdXNyL3NoYXJlL21vZHVsZWZpbGVzIiwgIi91c3Ivc2hh"; | |
| os.environ["_ModuleTable011_"] = "cmUvbW9kdWxlZmlsZXMvTGludXgiCiwgIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsICIvdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIiwgIi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfSwKc3lzdGVtQmFzZU1QQVRIID0gIi9ldGMvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
| os.environ["_ModuleTable_Sz_"] = "11"; | |
| _mlstatus = True | |
| == 2024-05-08 16:52:38,445 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
| bb-variables/live | |
| slurm-helpers/live | |
| openmpi-env/live | |
| bear-licences/live | |
| bb-singularity-conf/live | |
| bear-apps/2018b/live | |
| bear-apps/2019a/live | |
| bear-apps/2019b/live | |
| bear-apps/handbuilt/2020 | |
| bear-apps/2020a/live | |
| bear-apps/2020b/live | |
| bear-apps/2021a/live | |
| bear-apps/auto-load | |
| bluebear/live | |
| GCCcore/12.2.0 | |
| == 2024-05-08 16:52:38,445 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python --terse list | |
| == 2024-05-08 16:52:38,446 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python load CUDA/12.0.0' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 | |
| == 2024-05-08 16:52:39,522 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
| import os | |
| os.environ["__LMOD_REF_COUNT_CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0:1"; | |
| os.environ["CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0"; | |
| os.environ["__LMOD_REF_COUNT_CPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/include:1"; | |
| os.environ["CPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/include"; | |
| os.environ["CUDA_HOME"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0"; | |
| os.environ["CUDA_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0"; | |
| os.environ["CUDA_ROOT"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0"; | |
| os.environ["EBDEVELCUDA"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/easybuild/CUDA-12.0.0-easybuild-devel"; | |
| os.environ["EBROOTCUDA"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0"; | |
| os.environ["EBVERSIONCUDA"] = "12.0.0"; | |
| os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/lib64:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/lib64:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib:1"; | |
| os.environ["LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib"; | |
| os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/stubs/lib64:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib:1"; | |
| os.environ["LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/stubs/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib"; | |
| os.environ["LOADEDMODULES"] = "bb-variables/live:slurm-helpers/live:openmpi-env/live:bear-licences/live:bb-singularity-conf/live:bear-apps/2018b/live:bear-apps/2019a/live:bear-apps/2019b/live:bear-apps/handbuilt/2020:bear-apps/2020a/live:bear-apps/2020b/live:bear-apps/2021a/live:bear-apps/auto-load:bluebear/live:GCCcore/12.2.0:CUDA/12.0.0"; | |
| os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
| os.environ["__LMOD_REF_COUNT_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:1;/rds/bear-apps/bin:2;/rds/bear-apps/system/software/slurm-helpers:1;/rds/homes/b/branfosj/.yarn/bin:1;/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:1;/usr/lpp/mmfs/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1;/rds/homes/b/branfosj/.local/bin:1;/rds/homes/b/branfosj/bin:1;/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:2;/rds/projects/b/branfosj-bear-apps/apps_scripts:1"; | |
| os.environ["PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts"; | |
| os.environ["__LMOD_REF_COUNT_PKG_CONFIG_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/pkgconfig:1"; | |
| os.environ["PKG_CONFIG_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/pkgconfig"; | |
| os.environ["__LMOD_REF_COUNT_XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/share:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share:1"; | |
| os.environ["XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/share:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share"; | |
| os.environ["_LMFILES_"] = "/rds/bear-apps/system/modules/bb-variables/live:/rds/bear-apps/system/modules/slurm-helpers/live:/rds/bear-apps/system/modules/openmpi-env/live:/rds/bear-apps/system/modules/bear-licences/live:/rds/bear-apps/system/modules/bb-singularity-conf/live:/rds/bear-apps/system/modules/bear-apps/2018b/live:/rds/bear-apps/system/modules/bear-apps/2019a/live:/rds/bear-apps/system/modules/bear-apps/2019b/live:/rds/bear-apps/system/modules/bear-apps/handbuilt/2020:/rds/bear-apps/system/modules/bear-apps/2020a/live:/rds/bear-apps/system/modules/bear-apps/2020b/live:/rds/bear-apps/system/modules/bear-apps/2021a/live:/rds/bear-apps/system/modules/bear-apps/auto-load:/rds/bear-apps/system/modules/bluebear/live:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/GCCcore/12.2.0.lua:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/CUDA/12.0.0.lua"; | |
| os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXyA9IHsKTVR2ZXJzaW9uID0gMywKY19yZWJ1aWxkVGltZSA9IDcyMDAuMCwKY19zaG9ydFRpbWUgPSAwLjI0NTE2ODkyNDMzMTY3LApkZXB0aFQgPSB7fSwKZmFtaWx5ID0ge30sCm1UID0gewpDVURBID0gewpmbiA9ICIvcmRzL3Byb2plY3RzLzIwMTcvYnJhbmZvc2otcnNlL2Vhc3lidWlsZC9FTDgtaWNlL21vZHVsZXMvYWxsL0NVREEvMTIuMC4wLmx1YSIsCmZ1bGxOYW1lID0gIkNVREEvMTIuMC4wIiwKbG9hZE9yZGVyID0gMTYsCnByb3BUID0ge30sCnN0YWNrRGVwdGggPSAwLApzdGF0dXMgPSAiYWN0aXZlIiwKdXNlck5hbWUgPSAiQ1VEQS8xMi4wLjAiLAp3ViA9ICIwMDAwMDAwMTIuKnpmaW5hbCIsCn0sCkdDQ2NvcmUgPSB7CmZuID0gIi9yZHMv"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "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"; | |
| os.environ["_ModuleTable004_"] = "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"; | |
| os.environ["_ModuleTable005_"] = "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"; | |
| os.environ["_ModuleTable006_"] = "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"; | |
| os.environ["_ModuleTable007_"] = "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"; | |
| os.environ["_ModuleTable008_"] = "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"; | |
| os.environ["_ModuleTable009_"] = "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"; | |
| os.environ["_ModuleTable010_"] = "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"; | |
| os.environ["_ModuleTable011_"] = "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"; | |
| os.environ["_ModuleTable012_"] = "VEggPSAiL2V0Yy9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvTGludXg6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmU6L3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMiLAp9Cg=="; | |
| os.environ["_ModuleTable_Sz_"] = "12"; | |
| _mlstatus = True | |
| == 2024-05-08 16:52:39,523 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
| == 2024-05-08 16:52:39,523 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python load CUDA/12.0.0 | |
| == 2024-05-08 16:52:39,524 environment.py:93 INFO Environment variable LD_LIBRARY_PATH set to /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64 (previous value: '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib') | |
| == 2024-05-08 16:52:39,524 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python load numactl/2.0.16-GCCcore-12.2.0' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 | |
| == 2024-05-08 16:52:40,572 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
| import os | |
| os.environ["__LMOD_REF_COUNT_CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0:1"; | |
| os.environ["CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0"; | |
| os.environ["__LMOD_REF_COUNT_CPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/include:1"; | |
| os.environ["CPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/include"; | |
| os.environ["EBDEVELNUMACTL"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/easybuild/numactl-2.0.16-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBROOTNUMACTL"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0"; | |
| os.environ["EBVERSIONNUMACTL"] = "2.0.16"; | |
| os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib:1"; | |
| os.environ["LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib"; | |
| os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/stubs/lib64:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib:1"; | |
| os.environ["LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/stubs/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib"; | |
| os.environ["LOADEDMODULES"] = "bb-variables/live:slurm-helpers/live:openmpi-env/live:bear-licences/live:bb-singularity-conf/live:bear-apps/2018b/live:bear-apps/2019a/live:bear-apps/2019b/live:bear-apps/handbuilt/2020:bear-apps/2020a/live:bear-apps/2020b/live:bear-apps/2021a/live:bear-apps/auto-load:bluebear/live:GCCcore/12.2.0:CUDA/12.0.0:numactl/2.0.16-GCCcore-12.2.0"; | |
| os.environ["__LMOD_REF_COUNT_MANPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/share/man:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share/man:1;/usr/share/lmod/lmod/share/man:1;:1"; | |
| os.environ["MANPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/share/man:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share/man:/usr/share/lmod/lmod/share/man::"; | |
| os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
| os.environ["__LMOD_REF_COUNT_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:1;/rds/bear-apps/bin:2;/rds/bear-apps/system/software/slurm-helpers:1;/rds/homes/b/branfosj/.yarn/bin:1;/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:1;/usr/lpp/mmfs/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1;/rds/homes/b/branfosj/.local/bin:1;/rds/homes/b/branfosj/bin:1;/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:2;/rds/projects/b/branfosj-bear-apps/apps_scripts:1"; | |
| os.environ["PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts"; | |
| os.environ["__LMOD_REF_COUNT_PKG_CONFIG_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib/pkgconfig:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/pkgconfig:1"; | |
| os.environ["PKG_CONFIG_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib/pkgconfig:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/pkgconfig"; | |
| os.environ["__LMOD_REF_COUNT_XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/share:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/share:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share:1"; | |
| os.environ["XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/share:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/share:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/share"; | |
| os.environ["_LMFILES_"] = "/rds/bear-apps/system/modules/bb-variables/live:/rds/bear-apps/system/modules/slurm-helpers/live:/rds/bear-apps/system/modules/openmpi-env/live:/rds/bear-apps/system/modules/bear-licences/live:/rds/bear-apps/system/modules/bb-singularity-conf/live:/rds/bear-apps/system/modules/bear-apps/2018b/live:/rds/bear-apps/system/modules/bear-apps/2019a/live:/rds/bear-apps/system/modules/bear-apps/2019b/live:/rds/bear-apps/system/modules/bear-apps/handbuilt/2020:/rds/bear-apps/system/modules/bear-apps/2020a/live:/rds/bear-apps/system/modules/bear-apps/2020b/live:/rds/bear-apps/system/modules/bear-apps/2021a/live:/rds/bear-apps/system/modules/bear-apps/auto-load:/rds/bear-apps/system/modules/bluebear/live:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/GCCcore/12.2.0.lua:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/CUDA/12.0.0.lua:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/numactl/2.0.16-GCCcore-12.2.0.lua"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "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"; | |
| os.environ["_ModuleTable004_"] = "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"; | |
| os.environ["_ModuleTable005_"] = "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"; | |
| os.environ["_ModuleTable006_"] = "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"; | |
| os.environ["_ModuleTable007_"] = "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"; | |
| os.environ["_ModuleTable008_"] = "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"; | |
| os.environ["_ModuleTable009_"] = "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"; | |
| os.environ["_ModuleTable010_"] = "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"; | |
| os.environ["_ModuleTable011_"] = "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"; | |
| os.environ["_ModuleTable012_"] = "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"; | |
| os.environ["_ModuleTable013_"] = "YXJlL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvTGludXg6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmU6L3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMiLAp9Cg=="; | |
| os.environ["_ModuleTable_Sz_"] = "13"; | |
| _mlstatus = True | |
| == 2024-05-08 16:52:40,572 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
| == 2024-05-08 16:52:40,572 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python load numactl/2.0.16-GCCcore-12.2.0 | |
| == 2024-05-08 16:52:40,573 environment.py:93 INFO Environment variable LD_LIBRARY_PATH set to /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/extras/CUPTI/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64 (previous value: '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib') | |
| == 2024-05-08 16:52:40,582 modules.py:611 INFO Checking whether GCCcore/12.2.0 exists... | |
| == 2024-05-08 16:52:40,582 modules.py:619 INFO Module GCCcore/12.2.0 not found in list of available modules, checking via 'module show'... | |
| == 2024-05-08 16:52:40,582 modules.py:639 INFO Result for existence check of GCCcore/12.2.0 module: True | |
| == 2024-05-08 16:52:40,583 toolchain.py:746 INFO List of toolchain dependency modules and toolchain definition match! | |
| == 2024-05-08 16:52:40,623 compiler.py:354 INFO _set_optimal_architecture: using march=native as optarch for x86_64/Intel. | |
| == 2024-05-08 16:52:40,781 environment.py:93 INFO Environment variable CC set to gcc (previously undefined) | |
| == 2024-05-08 16:52:40,781 environment.py:93 INFO Environment variable EBVARCC set to gcc (previously undefined) | |
| == 2024-05-08 16:52:40,781 environment.py:93 INFO Environment variable CFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,781 environment.py:93 INFO Environment variable EBVARCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable CPPFLAGS set to -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/include -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/include (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARCPPFLAGS set to -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/include -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/include (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable CXX set to g++ (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARCXX set to g++ (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable CXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARCXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable F77 set to gfortran (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARF77 set to gfortran (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable F90 set to gfortran (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARF90 set to gfortran (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable F90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARF90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable FC set to gfortran (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARFC set to gfortran (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable FCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARFCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable FFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARFFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable FLIBS set to -lgfortran (previously undefined) | |
| == 2024-05-08 16:52:40,782 environment.py:93 INFO Environment variable EBVARFLIBS set to -lgfortran (previously undefined) | |
| == 2024-05-08 16:52:40,783 environment.py:93 INFO Environment variable LDFLAGS set to -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib (previously undefined) | |
| == 2024-05-08 16:52:40,783 environment.py:93 INFO Environment variable EBVARLDFLAGS set to -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/lib -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/lib -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/lib (previously undefined) | |
| == 2024-05-08 16:52:40,783 environment.py:93 INFO Environment variable LIBS set to -lm -lpthread (previously undefined) | |
| == 2024-05-08 16:52:40,783 environment.py:93 INFO Environment variable EBVARLIBS set to -lm -lpthread (previously undefined) | |
| == 2024-05-08 16:52:40,783 environment.py:93 INFO Environment variable OPTFLAGS set to -O2 -ftree-vectorize -march=native (previously undefined) | |
| == 2024-05-08 16:52:40,783 environment.py:93 INFO Environment variable EBVAROPTFLAGS set to -O2 -ftree-vectorize -march=native (previously undefined) | |
| == 2024-05-08 16:52:40,783 environment.py:93 INFO Environment variable PRECFLAGS set to -fno-math-errno (previously undefined) | |
| == 2024-05-08 16:52:40,783 environment.py:93 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previously undefined) | |
| == 2024-05-08 16:52:40,783 toolchain.py:941 INFO Putting RPATH wrappers in place... | |
| == 2024-05-08 16:52:40,817 filetools.py:512 INFO Command gcc found at /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin/gcc | |
| == 2024-05-08 16:52:40,817 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper (parents: True, set_gid: False, sticky: False) | |
| == 2024-05-08 16:52:40,817 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper/gcc | |
| == 2024-05-08 16:52:40,817 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
| == 2024-05-08 16:52:40,817 filetools.py:512 INFO Command gcc found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper/gcc | |
| == 2024-05-08 16:52:40,817 toolchain.py:1025 INFO RPATH wrapper script for /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin/gcc: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper/gcc (log: /dev/null) | |
| == 2024-05-08 16:52:40,842 filetools.py:512 INFO Command g++ found at /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin/g++ | |
| == 2024-05-08 16:52:40,842 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper (parents: True, set_gid: False, sticky: False) | |
| == 2024-05-08 16:52:40,842 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper/g++ | |
| == 2024-05-08 16:52:40,842 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
| == 2024-05-08 16:52:40,842 filetools.py:512 INFO Command g++ found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper/g++ | |
| == 2024-05-08 16:52:40,842 toolchain.py:1025 INFO RPATH wrapper script for /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin/g++: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper/g++ (log: /dev/null) | |
| == 2024-05-08 16:52:40,844 filetools.py:512 INFO Command gfortran found at /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin/gfortran | |
| == 2024-05-08 16:52:40,844 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper (parents: True, set_gid: False, sticky: False) | |
| == 2024-05-08 16:52:40,844 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper/gfortran | |
| == 2024-05-08 16:52:40,844 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
| == 2024-05-08 16:52:40,844 filetools.py:512 INFO Command gfortran found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper/gfortran | |
| == 2024-05-08 16:52:40,844 toolchain.py:1025 INFO RPATH wrapper script for /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin/gfortran: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper/gfortran (log: /dev/null) | |
| == 2024-05-08 16:52:40,844 filetools.py:512 INFO Command ld found at /usr/bin/ld | |
| == 2024-05-08 16:52:40,845 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper (parents: True, set_gid: False, sticky: False) | |
| == 2024-05-08 16:52:40,845 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper/ld | |
| == 2024-05-08 16:52:40,845 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
| == 2024-05-08 16:52:40,845 filetools.py:512 INFO Command ld found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper/ld | |
| == 2024-05-08 16:52:40,845 toolchain.py:1025 INFO RPATH wrapper script for /usr/bin/ld: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper/ld (log: /dev/null) | |
| == 2024-05-08 16:52:40,845 filetools.py:512 INFO Command ld.gold found at /usr/bin/ld.gold | |
| == 2024-05-08 16:52:40,845 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.gold_wrapper (parents: True, set_gid: False, sticky: False) | |
| == 2024-05-08 16:52:40,845 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.gold_wrapper/ld.gold | |
| == 2024-05-08 16:52:40,845 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.gold_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
| == 2024-05-08 16:52:40,845 filetools.py:512 INFO Command ld.gold found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.gold_wrapper/ld.gold | |
| == 2024-05-08 16:52:40,845 toolchain.py:1025 INFO RPATH wrapper script for /usr/bin/ld.gold: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.gold_wrapper/ld.gold (log: /dev/null) | |
| == 2024-05-08 16:52:40,846 filetools.py:512 INFO Command ld.bfd found at /usr/bin/ld.bfd | |
| == 2024-05-08 16:52:40,846 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.bfd_wrapper (parents: True, set_gid: False, sticky: False) | |
| == 2024-05-08 16:52:40,846 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.bfd_wrapper/ld.bfd | |
| == 2024-05-08 16:52:40,846 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.bfd_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.gold_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.gold_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.16-GCCcore-12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/12.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
| == 2024-05-08 16:52:40,846 filetools.py:512 INFO Command ld.bfd found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.bfd_wrapper/ld.bfd | |
| == 2024-05-08 16:52:40,846 toolchain.py:1025 INFO RPATH wrapper script for /usr/bin/ld.bfd: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmp9lypblac/rpath_wrappers/ld.bfd_wrapper/ld.bfd (log: /dev/null) | |
| == 2024-05-08 16:52:40,846 easyblock.py:1172 INFO Enabling CUDA PTX cache of size 1024 MiB at /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/eb-cuda-cache | |
| == 2024-05-08 16:52:40,846 environment.py:93 INFO Environment variable CUDA_CACHE_DISABLE set to 0 (previously undefined) | |
| == 2024-05-08 16:52:40,846 environment.py:93 INFO Environment variable CUDA_CACHE_PATH set to /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/eb-cuda-cache (previously undefined) | |
| == 2024-05-08 16:52:40,846 environment.py:93 INFO Environment variable CUDA_CACHE_MAXSIZE set to 1073741824 (previously undefined) | |
| == 2024-05-08 16:52:40,846 easyblock.py:2141 INFO Using /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ as start dir | |
| == 2024-05-08 16:52:40,847 hooks.py:215 INFO Found post_prepare_hook hook | |
| == 2024-05-08 16:52:40,847 hooks.py:249 INFO Running 'post_prepare_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:40,847 build_log.py:267 INFO ... (took 4 secs) | |
| == 2024-05-08 16:52:40,849 easyblock.py:3940 INFO Skipping configure step (skip: None, skipsteps: ['configure']) | |
| == 2024-05-08 16:52:40,849 build_log.py:267 INFO configuring [skipped] | |
| == 2024-05-08 16:52:40,851 build_log.py:267 INFO building... | |
| == 2024-05-08 16:52:40,853 easyblock.py:3979 INFO Starting build step | |
| == 2024-05-08 16:52:40,853 easyconfig.py:1680 INFO Generating template values... | |
| == 2024-05-08 16:52:40,853 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', cudamajver='12', cudaminver='0', cudashortver='12.0', cudaver='12.0.0', github_account='psm2', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-12.2.0', module_name='PSM2/12.0.1-GCCcore-12.2.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='8', start_dir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/', sysroot='', toolchain_name='GCCcore', toolchain_version='12.2.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
| == 2024-05-08 16:52:40,853 hooks.py:215 INFO Found pre_build_hook hook | |
| == 2024-05-08 16:52:40,853 hooks.py:249 INFO Running 'pre_build_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4d571128>], keyword args: {})... | |
| == 2024-05-08 16:52:41,076 easyblock.py:3987 INFO Running method build_step part of step build | |
| == 2024-05-08 16:52:41,076 configuremake.py:355 INFO Building target '' | |
| == 2024-05-08 16:52:41,076 run.py:339 INFO run_shell_cmd: Output of "sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 8 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR=" will be logged to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/run-shell-cmd-output/sed-qw3bv2zy/out.txt | |
| == 2024-05-08 16:52:41,079 run.py:374 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-05-08 16:52:41,079 run.py:396 INFO Running shell command 'sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 8 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR=' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 | |
| == 2024-05-08 16:52:42,347 run.py:499 INFO Output of 'sed ...' shell command (stdout + stderr): | |
| mkdir -p /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/build_release | |
| # Our buildflags.mak exports all variables, all are propogated to submakes. | |
| make[1]: warning: -j2 forced in submake: resetting jobserver mode. | |
| make[1]: Entering directory '/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ptl_self' | |
| gcc -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC -pthread -Wall -mavx2 -D_DEFAULT_SOURCE -D_SVID_SOURCE -D_BSD_SOURCE -O3 -g3 -DNVIDIA_GPU_DIRECT -DPSM_CUDA -fpic -fPIC -D_GNU_SOURCE -funwind-tables -Wno-strict-aliasing -Wformat-security -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/include -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/mpspawn -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/include/linux-x86_64 -I/usr/include/uapi -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/include -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ptl_ips -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/build_release -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ptl_self/.. /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ptl_self/ptl.c -MM -MF /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.d -MQ /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o | |
| gcc -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC -pthread -Wall -mavx2 -D_DEFAULT_SOURCE -D_SVID_SOURCE -D_BSD_SOURCE -O3 -g3 -DNVIDIA_GPU_DIRECT -DPSM_CUDA -fpic -fPIC -D_GNU_SOURCE -funwind-tables -Wno-strict-aliasing -Wformat-security -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/include -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/mpspawn -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/include/linux-x86_64 -I/usr/include/uapi -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/12.0.0/include -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1 -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ptl_ips -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/build_release -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ptl_self/.. -c /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ptl_self/ptl.c -o /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o | |
| as: unrecognized option '--gdwarf-5' | |
| make[1]: *** [Makefile:73: /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o] Error 1 | |
| make[1]: Leaving directory '/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-12.2.0/opa-psm2-PSM2_12.0.1/ptl_self' | |
| make: *** [Makefile:301: all] Error 1 | |
| == 2024-05-08 16:52:42,347 run.py:504 WARNING Shell command FAILED (exit code 2, see output above): sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 8 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR= | |
| == 2024-05-08 16:52:42,351 build_log.py:171 ERROR EasyBuild encountered an error (at easybuild/src/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): shell command 'sed ...' failed in build step for PSM2-12.0.1-GCCcore-12.2.0.eb (at easybuild/src/easybuild-framework/easybuild/framework/easyblock.py:4177 in run_all_steps) | |
| == 2024-05-08 16:52:42,351 build_log.py:267 INFO ... (took 1 secs) | |
| == 2024-05-08 16:52:42,353 filetools.py:1988 INFO Removing lock /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_PSM2_12.0.1-GCCcore-12.2.0.lock... | |
| == 2024-05-08 16:52:42,353 filetools.py:384 INFO Path /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_PSM2_12.0.1-GCCcore-12.2.0.lock successfully removed. | |
| == 2024-05-08 16:52:42,353 filetools.py:1992 INFO Lock removed: /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_PSM2_12.0.1-GCCcore-12.2.0.lock | |
| == 2024-05-08 16:52:42,353 easyblock.py:329 INFO Closing log for application name PSM2 version 12.0.1 |
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