brews

source("firehistory.R")

d <- read.fhx("17P.fhx")

# Make a copy of the data we read-in in case we fuck-up.
d.new <- d

# Reverse the level ordering for the type factor -- the plotting looks better.
d.new$rings$type <- factor(d$rings$type, levels = rev(levels(d$rings$type)))

brews

#! /usr/bin/env python

from mpl_toolkits.basemap import Basemap, shiftgrid, cm
import numpy as np
import matplotlib.pyplot as plt
from netCDF4 import Dataset

# The netCDF file is from ftp://ftp.cdc.noaa.gov/Datasets/noaa.ersst/sst.mnmean.nc
d = Dataset("sst.mon.anom.nc")
sst = d.variables["sst"][:][0, :, :]  # Should take the first time slice.

brews

#! /usr/bin/env python

from mpl_toolkits.basemap import Basemap, shiftgrid, cm
import numpy as np
import matplotlib.pyplot as plt
from netCDF4 import Dataset
import datetime

datetime_origin = datetime.datetime(1, 1, 1, 0, 0, 0, 0)
# In this case, this is 500 mb. Can check below with d.variables["level"][:]

brews

#! /usr/bin/env python

import scipy.io as sio
import matplotlib.pyplot as plt

class BadSeriesError(Exception): pass

class MatRwl(object):
    """ Read MATLAB files from Meko's RWL Velmex script.
    """

brews

#!/usr/bin/env Rscript
# 2011-11-07
# Convert full-ring .mat files from Meko's velmex script to common Tucson
# format.

suppressMessages(require(R.matlab))
suppressMessages(require(dplR))

args <- commandArgs(trailingOnly = TRUE)

brews

#! /usr/bin/env bash
# publishTex.sh
# 2010-06-08
# This is a quick script to help produce a PDF from .tex files for AMS publication.
# Run it from Bash like so:
# ./publishTex.sh sample.tex

if [ ! -e "$1" ]
then
    echo "The file or directory given does not seem to exist."

brews

#! /usr/bin/env python
# Copyright 2014 by S. Brewster Malevich <malevich@email.arizona.edu>

# This script adds `Time` variable to all netCDF files in the current working 
# directory (CWD) and then concatenates them all into a single netCDF file 
# `all.nc` in the CWD. This this uses Bash's `ncks` and `ncecat`.

import os
from shutil import rmtree

brews

#! /usr/bin/env bash
# 2014-05-02
# S. B. Malevich <malevich@email.arizona.edu>

# Dump netCDF files in CWD to a text CDF file. Change `time = 1 ;` dimension 
# to `time = UNLIMITED`, and then convert the CDF back into a netCDF file, 
# overwriting the original.

for f in *.nc; do
    cp $f $f.original # Make copy for safety. Might want to comment this out.

brews

#! /bin/csh -f
# 2014-10-11
# S. B. Malevich <malevich@email.arizona.edu

# Example of vorticity advection plotting script for weather analysis:

# You might want to change the fill plotting colors.

set IN_FILE = 'waf_assignment2_data.gem'
set OUT_FILE = 'totally_super_awesome_vadvec_map.gif'

brews

#! /usr/bin/env python3
# 2015-01-22
# Copyright 2015 S. Brewster Malevich <malevich@email.arizona.edu>

# Parse a directory's ITRDB .xml files. The target directory should be the first
# argument when calling this script. The default is to use the current working 
# directory. This script extract select data from each XML file and writes the 
# metadata to a tab-delimited file, `OUTFILE_NAME`.
#
# When the XML files are in the current working directory with this script, run: