Skip to content

Instantly share code, notes, and snippets.

Show Gist options
  • Save brothermechanic/02b24cb2b86233a6e8d06f1372f4d3fa to your computer and use it in GitHub Desktop.
Save brothermechanic/02b24cb2b86233a6e8d06f1372f4d3fa to your computer and use it in GitHub Desktop.
/var/tmp/portage/sys-cluster/mpich-3.3.2/temp/build.log
* Package: sys-cluster/mpich-3.3.2
* Repository: gentoofix
* USE: abi_x86_64 amd64 cxx elibc_glibc fortran kernel_linux threads userland_GNU
* FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox
* Using following Fortran compiler:
* F77: x86_64-pc-linux-gnu-gfortran
* FC: x86_64-pc-linux-gnu-gfortran
>>> Unpacking source...
>>> Unpacking mpich-3.3.2.tar.gz to /var/tmp/portage/sys-cluster/mpich-3.3.2/work
>>> Source unpacked in /var/tmp/portage/sys-cluster/mpich-3.3.2/work
>>> Preparing source in /var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2 ...
* Applying mpich-3.3-add-external-libdir-parameter.patch ...
[ ok ]
* Applying aclocal_f77.m4.patch ...
[ ok ]
* Running eautoreconf in '/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/src/pm/hydra/mpl' ...
* Running libtoolize --install --copy --force --automake ...
[ ok ]
* Running aclocal -I confdb ...
[ ok ]
* Running autoconf --force ...
[ ok ]
* Running autoheader ...
[ ok ]
* Running automake --add-missing --copy --foreign --force-missing ...
[ ok ]
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/mpl/
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/mpl/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2
* Running eautoreconf in '/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/src/pm/hydra' ...
* Running libtoolize --install --copy --force --automake ...
[ ok ]
* Running aclocal -I confdb -I tools/topo/hwloc/hwloc/config ...
[ ok ]
* Running autoconf --force ...
[ ok ]
* Running autoheader ...
[ ok ]
* Running automake --add-missing --copy --foreign --force-missing ...
[ ok ]
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/mpl/
* We've already been run in this tree; you should
* avoid this if possible (perhaps by filing a bug)
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/mpl/confdb/
* We've already been run in this tree; you should
* avoid this if possible (perhaps by filing a bug)
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/tools/topo/hwloc/hwloc/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/tools/topo/hwloc/hwloc/config/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2
* Running eautoreconf in '/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/test/mpi/dtpools' ...
* Running libtoolize --install --copy --force --automake ...
[ ok ]
* Running aclocal ...
[ ok ]
* Running autoconf --force ...
[ ok ]
* Running autoheader ...
[ ok ]
* Running automake --add-missing --copy --foreign --force-missing ...
[ ok ]
* Running eautoreconf in '/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/test/mpi' ...
* Running aclocal -I confdb ...
[ ok ]
* Running autoconf --force ...
[ ok ]
* Running autoheader ...
[ ok ]
* Running automake --add-missing --copy --foreign --force-missing ...
[ ok ]
* Running eautoreconf in '/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2' ...
* Running libtoolize --install --copy --force --automake ...
[ ok ]
* Running aclocal -I confdb -I src/hwloc/config ...
[ ok ]
* Running autoconf --force ...
[ ok ]
* Running autoheader ...
[ ok ]
* Running automake --add-missing --copy --foreign --force-missing ...
[ ok ]
* Running elibtoolize in: mpich-3.3.2/
* Running elibtoolize in: mpich-3.3.2/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/maint/
* Running elibtoolize in: mpich-3.3.2/src/hwloc/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/hwloc/config/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/izem/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/izem/m4/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpi/romio/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpi/romio/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpi/romio/mpl/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpi/romio/mpl/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpid/ch4/netmod/ofi/libfabric/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpid/ch4/netmod/ofi/libfabric/config/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpid/ch4/netmod/ucx/ucx/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpl/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/mpl/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/openpa/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/openpa/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/
* We've already been run in this tree; you should
* avoid this if possible (perhaps by filing a bug)
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/confdb/
* We've already been run in this tree; you should
* avoid this if possible (perhaps by filing a bug)
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/mpl/
* We've already been run in this tree; you should
* avoid this if possible (perhaps by filing a bug)
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/mpl/confdb/
* We've already been run in this tree; you should
* avoid this if possible (perhaps by filing a bug)
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/tools/topo/hwloc/hwloc/
* We've already been run in this tree; you should
* avoid this if possible (perhaps by filing a bug)
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra/tools/topo/hwloc/hwloc/config/
* We've already been run in this tree; you should
* avoid this if possible (perhaps by filing a bug)
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra2/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra2/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra2/libhydra/topo/hwloc/hwloc/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra2/libhydra/topo/hwloc/hwloc/config/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra2/mpl/
* Applying ppc64le/2.4.4 patch ...
* Running elibtoolize in: mpich-3.3.2/src/pm/hydra2/mpl/confdb/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
* Running elibtoolize in: mpich-3.3.2/src/util/logging/rlog/
* Running elibtoolize in: mpich-3.3.2/test/mpi/
* Running elibtoolize in: mpich-3.3.2/test/mpi/dtpools/
* Applying portage/1.2.0 patch ...
* Applying sed/1.5.6 patch ...
* Applying as-needed/2.4.3 patch ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2 ...
* abi_x86_64.amd64: running multilib-minimal_abi_src_configure
* econf: updating mpich-3.3.2/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/izem/m4/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/izem/m4/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/mpid/ch4/netmod/ucx/ucx/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/mpid/ch4/netmod/ucx/ucx/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/mpid/ch4/netmod/ofi/libfabric/config/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/mpid/ch4/netmod/ofi/libfabric/config/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/mpi/romio/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/mpi/romio/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/mpi/romio/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/mpi/romio/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/openpa/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/openpa/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/pm/hydra2/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/pm/hydra2/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/pm/hydra2/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/pm/hydra2/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/pm/hydra2/libhydra/topo/hwloc/hwloc/config/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/pm/hydra2/libhydra/topo/hwloc/hwloc/config/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/pm/hydra/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/pm/hydra/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/pm/hydra/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/pm/hydra/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/pm/hydra/mpl/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/pm/hydra/mpl/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/pm/hydra/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/pm/hydra/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/pm/hydra/tools/topo/hwloc/hwloc/config/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/pm/hydra/tools/topo/hwloc/hwloc/config/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/src/hwloc/config/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/src/hwloc/config/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/test/mpi/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/test/mpi/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/test/mpi/confdb/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/test/mpi/confdb/config.guess with /usr/share/gnuconfig/config.guess
* econf: updating mpich-3.3.2/test/mpi/dtpools/config.sub with /usr/share/gnuconfig/config.sub
* econf: updating mpich-3.3.2/test/mpi/dtpools/config.guess with /usr/share/gnuconfig/config.guess
/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=/usr/share/doc/mpich-3.3.2 --htmldir=/usr/share/doc/mpich-3.3.2/html --with-sysroot=/ --libdir=/usr/lib64 --enable-shared --with-hwloc-prefix=/usr --with-hwloc-libdir=lib64 --with-common-libdir=lib64 --with-prefix-libdir=lib64 --with-izem-libdir=lib64 --with-fiprovider-libdir=lib64 --with-thread-package=pthreads --enable-threads=single --sysconfdir=/etc/mpich --with-pm=hydra --disable-fast --enable-versioning --disable-romio --enable-cxx --enable-fortran=all
Configuring MPICH version 3.3.2 with '--prefix=/usr' '--build=x86_64-pc-linux-gnu' '--host=x86_64-pc-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--disable-dependency-tracking' '--disable-silent-rules' '--docdir=/usr/share/doc/mpich-3.3.2' '--htmldir=/usr/share/doc/mpich-3.3.2/html' '--with-sysroot=/' '--libdir=/usr/lib64' '--enable-shared' '--with-hwloc-prefix=/usr' '--with-hwloc-libdir=lib64' '--with-common-libdir=lib64' '--with-prefix-libdir=lib64' '--with-izem-libdir=lib64' '--with-fiprovider-libdir=lib64' '--with-thread-package=pthreads' '--enable-threads=single' '--sysconfdir=/etc/mpich' '--with-pm=hydra' '--disable-fast' '--enable-versioning' '--disable-romio' '--enable-cxx' '--enable-fortran=all' 'build_alias=x86_64-pc-linux-gnu' 'host_alias=x86_64-pc-linux-gnu' 'MPICHLIB_CFLAGS=-march=skylake -mabm -mavx256-split-unaligned-load -mavx256-split-unaligned-store -msgx -O2 -pipe -fno-semantic-interposition' 'MPICHLIB_CPPFLAGS=' 'MPICHLIB_CXXFLAGS=-march=skylake -mabm -mavx256-split-unaligned-load -mavx256-split-unaligned-store -msgx -O2 -pipe -fno-semantic-interposition' 'MPICHLIB_FFLAGS=-O2 -pipe' 'MPICHLIB_FCFLAGS=-O2 -pipe' 'FC=x86_64-pc-linux-gnu-gfortran' 'F77=x86_64-pc-linux-gnu-gfortran'
Running on system: Linux localhost 5.10.13-gentoo-x86_64 #1 SMP Thu Feb 4 13:48:21 MSK 2021 x86_64 Intel(R) Core(TM) i7-7700HQ CPU @ 2.80GHz GenuineIntel GNU/Linux
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking target system type... x86_64-pc-linux-gnu
checking for x86_64-pc-linux-gnu-icc... no
checking for x86_64-pc-linux-gnu-pgcc... no
checking for x86_64-pc-linux-gnu-xlc... no
checking for x86_64-pc-linux-gnu-xlC... no
checking for x86_64-pc-linux-gnu-pathcc... no
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking whether x86_64-pc-linux-gnu-gcc understands -c and -o together... yes
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for a BSD-compatible install... /usr/lib/portage/python3.9/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking dependency style of x86_64-pc-linux-gnu-gcc... none
checking whether to enable maintainer-specific portions of Makefiles... yes
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking the archiver (x86_64-pc-linux-gnu-ar) interface... ar
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B
checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-pc-linux-gnu-ar... (cached) x86_64-pc-linux-gnu-ar
checking for archiver @FILE support... @
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking for sysroot... /
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for x86_64-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for x86_64-pc-linux-gnu-icpc... no
checking for x86_64-pc-linux-gnu-pgCC... no
checking for x86_64-pc-linux-gnu-xlC... no
checking for x86_64-pc-linux-gnu-pathCC... no
checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes
checking dependency style of x86_64-pc-linux-gnu-g++... none
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for x86_64-pc-linux-gnu-ifort... x86_64-pc-linux-gnu-gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC
checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes
checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for x86_64-pc-linux-gnu-ifort... x86_64-pc-linux-gnu-gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC
checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes
checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
Parsing Arguments for OFI Netmod
checking hcoll/api/hcoll_api.h usability... no
checking hcoll/api/hcoll_api.h presence... no
checking for hcoll/api/hcoll_api.h... no
checking for hcoll_init in -lhcoll... no
configure: RUNNING PREREQ FOR ch3:nemesis
configure: ===== configuring src/mpl =====
configure: running /bin/sh /var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/src/mpl/configure --disable-option-checking '--prefix=/usr' --disable-versioning --enable-embedded '--build=x86_64-pc-linux-gnu' '--host=x86_64-pc-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--disable-dependency-tracking' '--disable-silent-rules' '--docdir=/usr/share/doc/mpich-3.3.2' '--htmldir=/usr/share/doc/mpich-3.3.2/html' '--with-sysroot=/' '--libdir=/usr/lib64' '--enable-shared' '--with-hwloc-prefix=/usr' '--with-hwloc-libdir=lib64' '--with-common-libdir=lib64' '--with-prefix-libdir=lib64' '--with-izem-libdir=lib64' '--with-fiprovider-libdir=lib64' '--with-thread-package=pthreads' '--enable-threads=single' '--sysconfdir=/etc/mpich' '--with-pm=hydra' '--disable-fast' '--enable-versioning' '--disable-romio' '--enable-cxx' '--enable-fortran=all' 'build_alias=x86_64-pc-linux-gnu' 'host_alias=x86_64-pc-linux-gnu' 'MPICHLIB_CFLAGS=-march=skylake -mabm -mavx256-split-unaligned-load -mavx256-split-unaligned-store -msgx -O2 -pipe -fno-semantic-interposition' 'MPICHLIB_CPPFLAGS=' 'MPICHLIB_CXXFLAGS=-march=skylake -mabm -mavx256-split-unaligned-load -mavx256-split-unaligned-store -msgx -O2 -pipe -fno-semantic-interposition' 'MPICHLIB_FFLAGS=-O2 -pipe' 'MPICHLIB_FCFLAGS=-O2 -pipe' 'FC=x86_64-pc-linux-gnu-gfortran' 'F77=x86_64-pc-linux-gnu-gfortran' --cache-file=/dev/null --srcdir=/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/src/mpl
checking for a BSD-compatible install... /usr/lib/portage/python3.9/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking for x86_64-pc-linux-gnu-icc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking whether x86_64-pc-linux-gnu-gcc understands -c and -o together... yes
checking dependency style of x86_64-pc-linux-gnu-gcc... none
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking the archiver (x86_64-pc-linux-gnu-ar) interface... ar
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B
checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-pc-linux-gnu-ar... (cached) x86_64-pc-linux-gnu-ar
checking for archiver @FILE support... @
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking for sysroot... /
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for x86_64-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for variable argument list macro functionality... yes
checking if C compiler supports __builtin_expect... yes
checking for gcov... gcov
checking whether the compiler supports __typeof(variable)... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking ctype.h usability... yes
checking ctype.h presence... yes
checking for ctype.h... yes
checking for sys/types.h... (cached) yes
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking for unistd.h... (cached) yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking windows.h usability... no
checking windows.h presence... no
checking for windows.h... no
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
checking for sys/mman.h... yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking valgrind.h usability... no
checking valgrind.h presence... no
checking for valgrind.h... no
checking memcheck.h usability... no
checking memcheck.h presence... no
checking for memcheck.h... no
checking valgrind/valgrind.h usability... no
checking valgrind/valgrind.h presence... no
checking for valgrind/valgrind.h... no
checking valgrind/memcheck.h usability... no
checking valgrind/memcheck.h presence... no
checking for valgrind/memcheck.h... no
checking helgrind.h usability... no
checking helgrind.h presence... no
checking for helgrind.h... no
checking valgrind/helgrind.h usability... no
checking valgrind/helgrind.h presence... no
checking for valgrind/helgrind.h... no
checking drd.h usability... no
checking drd.h presence... no
checking for drd.h... no
checking valgrind/drd.h usability... no
checking valgrind/drd.h presence... no
checking for valgrind/drd.h... no
checking whether the valgrind headers are broken or too old... yes
checking for clock_gettime... yes
checking for clock_getres... yes
checking for gethrtime... no
checking for mach_absolute_time... no
checking for gettimeofday... yes
checking for library containing clock_gettime... none required
checking for library containing clock_getres... none required
checking whether struct timespec is defined in time.h... yes
checking for CLOCK_REALTIME defined in time.h... yes
configure: Timer type selected is CLOCK_GETTIME
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for unistd.h... (cached) yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking for sched_yield... yes
checking for yield... no
checking for usleep... yes
checking for sleep... yes
checking for select... yes
checking whether usleep needs a declaration... no
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for pthread_key_create in -lpthread... yes
checking for pthread_yield... yes
checking for pthread_key_create... yes
checking for pthread_cleanup_push... no
checking whether pthread_cleanup_push is available (may be a macro in pthread.h)... no
configure: POSIX will be used for thread package.
checking for thread local storage... _Thread_local
checking for pthread_mutex_init... yes
checking for pthread_mutexattr_setpshared... yes
configure: POSIX will be used for interprocess mutex package.
checking for mkstemp... yes
checking whether mkstemp needs a declaration... no
checking for fdopen... yes
checking whether fdopen needs a declaration... no
checking for getpid... yes
checking for mmap... yes
checking for munmap... yes
configure: Using a memory-mapped file for shared memory
checking for strdup... yes
checking whether strdup needs a declaration... no
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for strncmp... yes
checking whether strncmp needs a declaration... no
checking for putenv... yes
checking whether putenv needs a declaration... no
checking for strerror... yes
checking whether strerror needs a declaration... no
checking for usleep... (cached) yes
checking whether usleep needs a declaration... (cached) no
checking for posix_memalign... yes
checking for aligned_alloc... yes
checking whether aligned_alloc needs a declaration... no
checking for backtrace_symbols... yes
checking whether backtrace_create_state is declared... no
checking whether backtrace_print is declared... no
checking for library containing gethostbyname... none required
checking for library containing socket... none required
checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
checking for ifaddrs.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking for inet_ntop... yes
checking for getifaddrs... yes
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking for __attribute__((aligned))... yes
checking for __attribute__((used))... yes
checking for __attribute__((fallthrough))... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating include/mpl_timer.h
config.status: creating include/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing prefix-config commands
configure: ===== done with src/mpl configure =====
configure: sourcing src/mpl/localdefs
configure: ===== configuring src/openpa =====
configure: running /bin/sh /var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/src/openpa/configure --disable-option-checking '--prefix=/usr' --disable-versioning --enable-embedded --with-atomic-primitives=auto_allow_emulation '--build=x86_64-pc-linux-gnu' '--host=x86_64-pc-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--disable-dependency-tracking' '--disable-silent-rules' '--docdir=/usr/share/doc/mpich-3.3.2' '--htmldir=/usr/share/doc/mpich-3.3.2/html' '--with-sysroot=/' '--libdir=/usr/lib64' '--enable-shared' '--with-hwloc-prefix=/usr' '--with-hwloc-libdir=lib64' '--with-common-libdir=lib64' '--with-prefix-libdir=lib64' '--with-izem-libdir=lib64' '--with-fiprovider-libdir=lib64' '--with-thread-package=pthreads' '--enable-threads=single' '--sysconfdir=/etc/mpich' '--with-pm=hydra' '--disable-fast' '--enable-versioning' '--disable-romio' '--enable-cxx' '--enable-fortran=all' 'build_alias=x86_64-pc-linux-gnu' 'host_alias=x86_64-pc-linux-gnu' 'MPICHLIB_CFLAGS=-march=skylake -mabm -mavx256-split-unaligned-load -mavx256-split-unaligned-store -msgx -O2 -pipe -fno-semantic-interposition' 'MPICHLIB_CPPFLAGS=' 'MPICHLIB_CXXFLAGS=-march=skylake -mabm -mavx256-split-unaligned-load -mavx256-split-unaligned-store -msgx -O2 -pipe -fno-semantic-interposition' 'MPICHLIB_FFLAGS=-O2 -pipe' 'MPICHLIB_FCFLAGS=-O2 -pipe' 'FC=x86_64-pc-linux-gnu-gfortran' 'F77=x86_64-pc-linux-gnu-gfortran' --cache-file=/dev/null --srcdir=/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/src/openpa
checking for a BSD-compatible install... /usr/lib/portage/python3.9/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking whether x86_64-pc-linux-gnu-gcc understands -c and -o together... yes
checking dependency style of x86_64-pc-linux-gnu-gcc... none
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking the archiver (x86_64-pc-linux-gnu-ar) interface... ar
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B
checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-pc-linux-gnu-ar... (cached) x86_64-pc-linux-gnu-ar
checking for archiver @FILE support... @
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking for sysroot... /
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for x86_64-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for x86_64-pc-linux-gnu-gcc... (cached) x86_64-pc-linux-gnu-gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... (cached) yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... (cached) none needed
checking whether x86_64-pc-linux-gnu-gcc understands -c and -o together... (cached) yes
checking dependency style of x86_64-pc-linux-gnu-gcc... (cached) none
checking whether to enable assertions... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking atomic.h usability... no
checking atomic.h presence... no
checking for atomic.h... no
checking intrin.h usability... no
checking intrin.h presence... no
checking for intrin.h... no
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for an ANSI C-conforming const... yes
checking for pthread_create in -lpthread... yes
checking for pthread_yield... yes
checking if 100 threads can be run at once... yes
checking size of void *... 8
checking size of int... 4
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking if compiler rejects bogus asm statements... yes
checking for support for gcc x86/x86_64 primitives... yes
checking for support for gcc x86 primitives for pre-Pentium 4... yes
checking for support for gcc ia64 primitives... no
checking for support for gcc PowerPC atomics... no
checking for support for gcc ARM atomics... no
checking for support for gcc SiCortex atomics... no
checking for support for gcc atomic intrinsics... yes
checking for support for Windows NT atomic intrinsics... no
checking for support for Sun atomic operations library... no
checking whether to enable strict fairness checks... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating test/Makefile
config.status: creating openpa.pc
config.status: creating src/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing prefix-config commands
configure: ===== done with src/openpa configure =====
checking for type of weak symbol alias support... pragma weak
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute__ ((weak_import)) allowed... yes
checking whether __attribute__((weak,alias(...))) allowed... yes
checking for multiple weak symbol support... yes
checking if x86_64-pc-linux-gnu-gcc supports -fvisibility=hidden... yes
checking whether to enable symbol visibility... yes (via -fvisibility=hidden)
checking hwloc.h usability... yes
checking hwloc.h presence... yes
checking for hwloc.h... yes
checking for hwloc_topology_set_pid in -lhwloc... yes
checking if non-embedded hwloc works... yes
sourcing /var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2/src/pm/hydra/mpichprereq
checking whether the compiler defines __func__... yes
checking whether the compiler defines __FUNC__... no
checking whether the compiler sets __FUNCTION__... yes
checking whether C compiler accepts option -O0... yes
checking whether C compiler option -O0 works with an invalid prototype program... yes
checking whether routines compiled with -O0 can be linked with ones compiled without -O0... yes
checking for shared library (esp. rpath) characteristics of CC... done (results in src/env/cc_shlib.conf)
checking whether Fortran 77 compiler accepts option -O0... yes
checking whether routines compiled with -O0 can be linked with ones compiled without -O0... yes
checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v
checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../.. -lhwloc -lgfortran -lm -lquadmath
checking whether x86_64-pc-linux-gnu-gfortran accepts the FLIBS found by autoconf... yes
checking whether x86_64-pc-linux-gnu-gcc links with FLIBS found by autoconf... yes
checking whether Fortran 77 and C objects are compatible... yes
checking for linker for Fortran main program... Use Fortran to link programs
checking for Fortran 77 name mangling... lower uscore
checking for libraries to link Fortran main with C stdio routines... none
checking whether Fortran init will work with C... yes
checking for extension for Fortran 90 programs... f90
checking whether the Fortran 90 compiler (x86_64-pc-linux-gnu-gfortran -O2 -pipe ) works... yes
checking whether the Fortran 90 compiler (x86_64-pc-linux-gnu-gfortran -O2 -pipe ) is a cross-compiler... no
checking whether Fortran 90 compiler works with Fortran 77 compiler... yes
checking for shared library (esp. rpath) characteristics of F77... done (results in src/env/f77_shlib.conf)
checking whether Fortran 77 accepts ! for comments... yes
checking for include directory flag for Fortran... -I
checking for Fortran 77 flag for library directories... -L
checking whether Fortran 77 compiler processes .F files with C preprocessor... yes
checking whether x86_64-pc-linux-gnu-gfortran allows mismatched arguments... no
configure: error: The Fortran compiler x86_64-pc-linux-gnu-gfortran will not compile files that call
the same routine with arguments of different types.
!!! Please attach the following file when seeking support:
!!! /var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2-abi_x86_64.amd64/config.log
* ERROR: sys-cluster/mpich-3.3.2::gentoofix failed (configure phase):
* econf failed
*
* Call stack:
* ebuild.sh, line 125: Called src_configure
* environment, line 2223: Called multilib-minimal_src_configure
* environment, line 1628: Called multilib_foreach_abi 'multilib-minimal_abi_src_configure'
* environment, line 1881: Called multibuild_foreach_variant '_multilib_multibuild_wrapper' 'multilib-minimal_abi_src_configure'
* environment, line 1558: Called _multibuild_run '_multilib_multibuild_wrapper' 'multilib-minimal_abi_src_configure'
* environment, line 1556: Called _multilib_multibuild_wrapper 'multilib-minimal_abi_src_configure'
* environment, line 650: Called multilib-minimal_abi_src_configure
* environment, line 1622: Called multilib_src_configure
* environment, line 2113: Called econf '--enable-shared' '--with-hwloc-prefix=/usr' '--with-hwloc-libdir=lib64' '--with-common-libdir=lib64' '--with-prefix-libdir=lib64' '--with-izem-libdir=lib64' '--with-fiprovider-libdir=lib64' '--with-thread-package=pthreads' '--enable-threads=single' '--sysconfdir=/etc/mpich' '--with-pm=hydra' '--disable-fast' '--enable-versioning' '--disable-romio' '--enable-cxx' '--enable-fortran=all'
* phase-helpers.sh, line 680: Called __helpers_die 'econf failed'
* isolated-functions.sh, line 112: Called die
* The specific snippet of code:
* die "$@"
*
* If you need support, post the output of `emerge --info '=sys-cluster/mpich-3.3.2::gentoofix'`,
* the complete build log and the output of `emerge -pqv '=sys-cluster/mpich-3.3.2::gentoofix'`.
* The complete build log is located at '/var/tmp/portage/sys-cluster/mpich-3.3.2/temp/build.log'.
* The ebuild environment file is located at '/var/tmp/portage/sys-cluster/mpich-3.3.2/temp/environment'.
* Working directory: '/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2-abi_x86_64.amd64'
* S: '/var/tmp/portage/sys-cluster/mpich-3.3.2/work/mpich-3.3.2'
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment