fq_count_timer.sh

#!/bin/bash -
set -o nounset                              # Treat unset variables as an error

TSV="count_timing.tsv"
CORES=4
echo "Time" > $TSV
for i in `seq 1 10000`
do
        seqkit -j $CORES count pcs109_5k.fq 1>/dev/null 2>> $TSV
done
csvtk watch -O count_timing.pdf -f Time $TSV