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chris:~/programming/shogun/build/tests/unit$ valgrind ctest -R LDA | |
==9073== Memcheck, a memory error detector | |
==9073== Copyright (C) 2002-2013, and GNU GPL'd, by Julian Seward et al. | |
==9073== Using Valgrind-3.10.1 and LibVEX; rerun with -h for copyright info | |
==9073== Command: ctest -R LDA | |
==9073== | |
Test project /home/chris/programming/shogun/build/tests/unit | |
Start 99: unit-FLDATest | |
1/4 Test #99: unit-FLDATest .................... Passed 0.10 sec | |
Start 100: unit-FLDATesti |
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[ 92%] Building CXX object tests/unit/CMakeFiles/shogun-unit-test.dir/classifier/LDA_unittest.cc.o | |
Linking CXX executable shogun-unit-test | |
CMakeFiles/shogun-unit-test.dir/features/StreamingSparseFeatures_unittest.cc.o: In function `testing::internal::FloatingPoint<double>::DistanceBetweenSignAndMagnitudeNumbers(unsigned long long const&, unsigned long long const&)': | |
/home/chris/programming/shogun/tests/unit/features/StreamingSparseFeatures_unittest.cc:22: warning: the use of `mktemp' is dangerous, better use `mkstemp' or `mkdtemp' | |
CMakeFiles/shogun-unit-test.dir/DynamicObjectArray_unittest.cc.o: In function `__static_initialization_and_destruction_0': | |
/home/chris/programming/shogun/tests/unit/DynamicObjectArray_unittest.cc:16: undefined reference to `testing::internal::MakeAndRegisterTestInfo(char const*, char const*, char const*, char const*, void const*, void (*)(), void (*)(), testing::internal::TestFactoryBase*)' | |
/home/chris/programming/shogun/tests/unit/DynamicObjectArray_unittest.cc:37: undefined refere |
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chris@Pure-Gold:~/programming/shogun/build$ make | |
[ 0%] Built target Eigen3 | |
[ 1%] Built target class_list | |
[ 2%] Generating version header | |
[ 2%] Built target version | |
[ 66%] Built target libshogun | |
[ 66%] Built target shogun | |
[ 66%] copying SWIG files | |
[ 66%] Built target python_modular_src | |
[ 66%] Building CXX object src/interfaces/python_modular/CMakeFiles/_python_modular.dir/modshogunPYTHON_wrap.cxx.o |
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#include <shogun/features/DenseFeatures.h> | |
#include <shogun/features/DataGenerator.h> | |
#include <shogun/labels/BinaryLabels.h> | |
#include <shogun/classifier/LDA.h> | |
int main(argc, argv**) | |
{ | |
... | |
return 0; |
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/* | |
* This program is free software; you can redistribute it and/or modify | |
* it under the terms of the GNU General Public License as published by | |
* the Free Software Foundation; either version 3 of the License, or | |
* (at your option) any later version. | |
* | |
* Written (W) 1999-2009 Soeren Sonnenburg | |
* Written (W) 2014 Abhijeet Kislay | |
* Copyright (C) 1999-2009 Fraunhofer Institute FIRST and Max-Planck-Society | |
*/ |
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chris@Pure-Gold:~/programming/shogun/build$ make | |
[ 0%] Built target Eigen3 | |
[ 1%] Built target GoogleMock | |
[ 1%] Built target discover_gtest_tests | |
[ 1%] Built target class_list | |
[ 2%] Generating version header | |
[ 2%] Built target version | |
Scanning dependencies of target libshogun | |
[ 2%] Building CXX object src/shogun/CMakeFiles/libshogun.dir/regression/LeastAngleRegression.cpp.o | |
[ 66%] Built target libshogun |
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template <class ST> SGMatrix<ST> CLeastAngleRegression<ST>::cholesky_insert(const SGMatrix<ST>& X, | |
const SGMatrix<ST>& X_active, SGMatrix<ST>& R, int32_t i_max_corr, int32_t num_active) | |
{ | |
Map<Matrix<ST,-1,-1,0,-1,-1>> map_X(X.matrix, X.num_rows, X.num_cols); //Map<VectorXd> | |
Map<Matrix<ST,-1,-1,0,-1,-1>> map_X_active(X_active.matrix, X.num_rows, num_active); //Map<MatrixXd> | |
ST diag_k = map_X.col(i_max_corr).dot(map_X.col(i_max_corr)); | |
// col_k is the k-th column of (X'X) | |
Map<Matrix<ST, -1, 1, 0,-1, 1>> map_i_max(X.get_column_vector(i_max_corr), X.num_rows);//Map<VectorXd> | |
Matrix<ST, -1, 1, 0,-1, 1> R_k = map_X_active.transpose()*map_i_max;//VectorXd |
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chris@Pure-Gold:~/programming/shogun/build$ cmake -DENABLE_TESTING=on -DCMAKE_BUILD_TYPE=Debug .. | |
-- Could not determine Eclipse version, assuming at least 3.6 (Helios). Adjust CMAKE_ECLIPSE_VERSION if this is wrong. | |
-- Using system's malloc | |
-- Could NOT find MOSEK (missing: MOSEK_DIR MOSEK_INCLUDE_DIR MOSEK_LIBRARY) | |
-- A library with BLAS API found. | |
-- A library with LAPACK API found. | |
-- Could NOT find Atlas (missing: Atlas_BLAS_LIBRARY Atlas_LAPACK_LIBRARY) | |
-- Could NOT find CBLAS (missing: CBLAS_LIBRARY) | |
-- Could NOT find GLPK (missing: GLPK_LIBRARY GLPK_INCLUDE_DIR GLPK_PROPER_VERSION_FOUND) | |
-- Could NOT find CPLEX (missing: CPLEX_LIBRARY CPLEX_INCLUDE_DIR) |
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/* | |
* This program is free software; you can redistribute it and/or modify | |
* it under the terms of the GNU General Public License as published by | |
* the Free Software Foundation; either version 3 of the License, or | |
* (at your option) any later version. | |
* | |
* Written (W) 2012 Chiyuan Zhang | |
* Copyright (C) 2012 Chiyuan Zhang | |
*/ |
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chris@Pure-Gold:~/programming/shogun/build$ make | |
[ 0%] Built target Eigen3 | |
[ 1%] Built target GoogleMock | |
[ 1%] Built target discover_gtest_tests | |
[ 1%] Built target class_list | |
[ 2%] Generating version header | |
[ 2%] Built target version | |
[ 64%] Built target libshogun | |
[ 64%] Built target shogun | |
[ 88%] Built target shogun-unit-test |
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