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HOMEBREW_VERSION: 0.9.4
ORIGIN: https://github.com/mxcl/homebrew.git
HEAD: d68524bfd774b6b2fd91f49d914bf18e3ae7c22f
HOMEBREW_PREFIX: /usr/local
HOMEBREW_CELLAR: /usr/local/Cellar
CPU: quad-core 64-bit sandybridge
OS X: 10.8.3-x86_64
Xcode: 4.6.2
CLT: 4.6.0.0.1.1362189000
GCC-4.2: build 5666
LLVM-GCC: build 2336
Clang: 4.2 build 425
X11: 2.7.4 => /opt/X11
System Ruby: 1.8.7-358
Perl: /usr/bin/perl
Python: /usr/local/bin/python => /usr/local/Cellar/python/2.7.5/Frameworks/Python.framework/Versions/2.7/bin/python2.7
Ruby: /usr/local/bin/ruby => /usr/local/Cellar/ruby/2.0.0-p195/bin/ruby
Your system is ready to brew.
==> Downloading http://cran.r-project.org/src/base/R-3/R-3.0.1.tar.gz
Already downloaded: /Library/Caches/Homebrew/r-3.0.1.tar.gz
tar xf /Library/Caches/Homebrew/r-3.0.1.tar.gz
==> Using Homebrew-provided fortran compiler.
This may be changed by setting the FC environment variable.
==> ./configure --prefix=/usr/local/Cellar/r/3.0.1 --with-aqua --enable-R-framework --with-lapack
./configure --prefix=/usr/local/Cellar/r/3.0.1 --with-aqua --enable-R-framework --with-lapack
checking build system type... x86_64-apple-darwin12.3.0
checking host system type... x86_64-apple-darwin12.3.0
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... found
checking for working autoconf... found
checking for working automake... found
checking for working autoheader... found
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/local/bin/ginstall -c
checking for sed... /usr/bin/sed
checking for which... /usr/bin/which
checking for less... /usr/bin/less
checking for gtar... no
checking for gnutar... /usr/bin/gnutar
checking for tex... /usr/texbin/tex
checking for pdftex... /usr/texbin/pdftex
checking for pdflatex... /usr/texbin/pdflatex
checking for makeindex... /usr/texbin/makeindex
checking for makeinfo... /usr/bin/makeinfo
checking whether makeinfo version is at least 4.7... yes
checking for ginstall-info... no
checking for install-info... /usr/bin/install-info
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... /usr/texbin/kpsewhich
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /usr/bin/gzip
checking for bzip2... /usr/bin/bzip2
checking for firefox... no
checking for mozilla... no
checking for galeon... no
checking for opera... no
checking for xdg-open... no
checking for kfmclient... no
checking for gnome-moz-remote... no
checking for open... /usr/bin/open
using default browser ... /usr/bin/open
checking for acroread... no
checking for acroread4... no
checking for xdg-open... no
checking for evince... no
checking for xpdf... no
checking for gv... no
checking for gnome-gv... no
checking for ggv... no
checking for okular... no
checking for kpdf... no
checking for open... /usr/bin/open
checking for notangle... false
checking for pkg-config... /usr/local/bin/pkg-config
checking for gcc... /usr/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking how to run the C preprocessor... /usr/bin/clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking whether /usr/bin/clang needs -traditional... no
checking how to run the C preprocessor... /usr/bin/clang -E
defining F77 to be /usr/local/bin/gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether /usr/local/bin/gfortran accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/bin/clang++ accepts -g... yes
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking whether __attribute__((visibility())) is supported... no
checking whether /usr/bin/clang accepts -fvisibility... yes
checking whether /usr/local/bin/gfortran accepts -fvisibility... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking whether we are using the GNU Objective C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for Objective C++ compiler... trying some possibilities
checking whether /usr/bin/clang++ can compile ObjC++... yes
/usr/bin/clang++
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by /usr/bin/clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from /usr/bin/clang object... ok
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether /usr/bin/clang++ accepts -g... (cached) yes
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking whether we are using the GNU Fortran 77 compiler... (cached) yes
checking whether /usr/local/bin/gfortran accepts -g... (cached) yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for ld used by /usr/bin/clang++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... no
checking whether the /usr/bin/clang++ linker (/usr/bin/ld) supports shared libraries... yes
checking for /usr/bin/clang++ option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang++ static flag -static works... no
checking if /usr/bin/clang++ supports -c -o file.o... yes
checking if /usr/bin/clang++ supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/local/bin/gfortran option to produce PIC... -fno-common
checking if /usr/local/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/local/bin/gfortran static flag -static works... no
checking if /usr/local/bin/gfortran supports -c -o file.o... yes
checking if /usr/local/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/local/bin/gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking for sin in -lm... yes
checking for library containing dlopen... none required
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... no
checking elf.h presence... no
checking for elf.h... no
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... no
checking fpu_control.h presence... no
checking for fpu_control.h... no
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... no
checking return type of signal handlers... void
checking for uint64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for /usr/bin/clang option to accept ISO C99... none needed
checking for /usr/bin/clang option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of size_t... 8
checking size of long double... 16
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether /usr/bin/clang supports -c -o FILE.lo... yes
checking for /usr/bin/clang option to support OpenMP... unsupported
checking how to get verbose linking output from /usr/local/bin/gfortran... -v
checking for Fortran 77 libraries of /usr/local/bin/gfortran... -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0/../../.. -lgfortran -lquadmath -lm
checking how to get verbose linking output from /usr/bin/clang... -v
checking for C libraries of /usr/bin/clang... -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking whether /usr/local/bin/gfortran appends underscores to external names... yes
checking whether /usr/local/bin/gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether /usr/local/bin/gfortran and /usr/bin/clang agree on int and double... yes
checking whether /usr/local/bin/gfortran and /usr/bin/clang agree on double complex... yes
checking for /usr/local/bin/gfortran option to support OpenMP... -fopenmp
checking whether /usr/bin/clang++ accepts -M for generating dependencies... yes
checking for /usr/bin/clang++ option to support OpenMP... unsupported
checking whether we can compute ObjC Make dependencies... yes, using /usr/bin/clang -MM
checking for ObjC runtime library... -lobjc
checking for ObjC runtime style... next
checking whether /usr/bin/clang accepts -fobjc-exceptions... yes
checking for cached Foundation settings... no
checking whether default Foundation framework works... no
checking whether -framework Foundation works... yes
checking for working Foundation implementation... yes
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... no
checking whether linker supports dynamic lookup... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log1pl exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether nearbyint exists and is declared... yes
checking whether nearbyintl exists and is declared... yes
checking whether powl exists and is declared... yes
checking whether rint exists and is declared... yes
checking whether rintl exists and is declared... yes
checking whether va_copy exists and is declared... yes
checking for isblank... yes
checking for fseeko... yes
checking for ftello... yes
checking for matherr... yes
checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
checking whether sigaction exists and is declared... yes
checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... no
checking whether sched_getaffinity exists and is declared... no
checking whether utime exists and is declared... yes
checking for clock_gettime in -lrt... no
checking whether clock_gettime exists and is declared... no
checking whether timespec_get exists and is declared... no
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
checking for mempcpy... no
checking for realpath... yes
checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
checking for isnan... yes
checking whether isfinite is declared... yes
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... no
checking whether putenv("FOO=") can unset an environment variable... no
checking for nl_langinfo and CODESET... yes
checking for mkdtemp... yes
checking for strdup... yes
checking for strncasecmp... yes
checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... yes
checking for working sigaction... yes
checking whether mktime sets errno... no
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether C99 double complex is supported... yes
checking whether cabs exists and is declared... yes
checking whether carg exists and is declared... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking for cblas_cdotu_sub in vecLib framework... -framework vecLib
checking iconv.h usability... yes
checking iconv.h presence... yes
checking for iconv.h... yes
checking for iconv... in libiconv
checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
checking for iconvlist... yes
checking for iconv... yes
checking for iconv declaration...
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking wctype.h usability... yes
checking wctype.h presence... yes
checking for wctype.h... yes
checking whether mbrtowc exists and is declared... yes
checking whether wcrtomb exists and is declared... yes
checking whether wcscoll exists and is declared... yes
checking whether wcsftime exists and is declared... yes
checking whether wcstod exists and is declared... yes
checking whether mbstowcs exists and is declared... yes
checking whether wcstombs exists and is declared... yes
checking whether wctrans exists and is declared... yes
checking whether iswblank exists and is declared... yes
checking whether wctype exists and is declared... yes
checking whether iswctype exists and is declared... yes
checking for wctrans_t... yes
checking for mbstate_t... yes
checking for ICU... no
checking for ucol_open in -licucore... yes
checking for X... libraries , headers
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking X11/Intrinsic.h usability... yes
checking X11/Intrinsic.h presence... yes
checking for X11/Intrinsic.h... yes
checking for XtToolkitInitialize in -lXt... yes
using X11 ... yes
checking for KeySym... yes
checking X11/Xmu/Atoms.h usability... yes
checking X11/Xmu/Atoms.h presence... yes
checking for X11/Xmu/Atoms.h... yes
checking for XmuInternAtom in -lXmu... yes
checking whether pkg-config knows about cairo and pango... yes
checking whether cairo including pango is >= 1.2 and works... yes
checking for CFStringGetSystemEncoding in CoreFoundation framework... -framework CoreFoundation
checking for tclConfig.sh... no
checking for tclConfig.sh in library (sub)directories... /usr/local/lib/tclConfig.sh
checking for tkConfig.sh... no
checking for tkConfig.sh in library (sub)directories... /usr/local/lib/tkConfig.sh
checking tcl.h usability... yes
checking tcl.h presence... yes
checking for tcl.h... yes
checking tk.h usability... yes
checking tk.h presence... yes
checking for tk.h... yes
checking whether compiling/linking Tcl/Tk code works... no
checking for BSD networking... yes
checking if jpeglib version >= 6b... yes
checking for jpeg_destroy_compress in -ljpeg... yes
checking for main in -lz... yes
checking if libpng version >= 1.2.7... yes
checking for png_create_write_struct in -lpng... yes
checking tiffio.h usability... yes
checking tiffio.h presence... yes
checking for tiffio.h... yes
checking for TIFFOpen in -ltiff... yes
checking rpc/types.h usability... yes
checking rpc/types.h presence... yes
checking for rpc/types.h... yes
checking for rpc/xdr.h... yes
checking for XDR support... yes
checking whether zlib support needs to be compiled... yes
checking mmap support for zlib... yes
checking whether bzip2 support needs to be compiled... yes
checking for lzma_version_number in -llzma... yes
checking lzma.h usability... yes
checking lzma.h presence... yes
checking for lzma.h... yes
checking if lzma version >= 4.999... yes
checking whether PCRE support needs to be compiled... yes
checking whether leap seconds are treated according to POSIX... yes
checking for inline... inline
checking for sys/time.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for struct stat.st_atim.tv_nsec... no
checking for struct stat.st_atimespec.tv_nsec... yes
checking for setitimer... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking whether KERN_USRSTACK sysctl is supported... yes
checking for lpr... lpr
checking for paperconf... false
checking whether we are using the GNU Fortran compiler... yes
checking whether /usr/local/bin/gfortran accepts -g... yes
checking whether we are using the GNU Fortran compiler... (cached) yes
checking whether /usr/local/bin/gfortran accepts -g... (cached) yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/local/bin/gfortran option to produce PIC... -fno-common
checking if /usr/local/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/local/bin/gfortran static flag -static works... no
checking if /usr/local/bin/gfortran supports -c -o file.o... yes
checking if /usr/local/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/local/bin/gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for /usr/local/bin/gfortran option to support OpenMP... -fopenmp
checking for recommended packages... yes
checking whether NLS is requested... yes
Configuring src/extra/intl directory
checking for a thread-safe mkdir -p... /usr/local/bin/gmkdir -p
checking whether we are using the GNU C Library 2 or newer... no
checking for ranlib... (cached) ranlib
checking for simple visibility declarations... yes
checking for stdint.h... yes
checking for getpagesize... yes
checking for working mmap... yes
checking whether integer division by zero raises SIGFPE... yes
checking for inttypes.h... yes
checking for unsigned long long int... yes
checking for inttypes.h... (cached) yes
checking whether the inttypes.h PRIxNN macros are broken... no
checking whether imported symbols can be declared weak... no
checking for multithread API to use... none
checking argz.h usability... no
checking argz.h presence... no
checking for argz.h... no
checking for inttypes.h... (cached) yes
checking for limits.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for getcwd... yes
checking for getegid... yes
checking for geteuid... yes
checking for getgid... yes
checking for getuid... yes
checking for mempcpy... (cached) no
checking for munmap... yes
checking for stpcpy... yes
checking for strcasecmp... yes
checking for strdup... (cached) yes
checking for strtoul... yes
checking for tsearch... yes
checking for argz_count... no
checking for argz_stringify... no
checking for argz_next... no
checking for __fsetlocking... no
checking whether feof_unlocked is declared... yes
checking whether fgets_unlocked is declared... no
checking for iconv... (cached) yes
checking for iconv declaration... (cached)
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... no
checking for bison... bison
checking version of bison... 2.3, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... no
checking for stdint.h... (cached) yes
checking for SIZE_MAX... yes
checking for stdint.h... (cached) yes
checking for CFPreferencesCopyAppValue... yes
checking for CFLocaleCopyCurrent... yes
checking for ptrdiff_t... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
checking for fwprintf... yes
checking for putenv... (cached) yes
checking for setenv... yes
checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
checking whether _snprintf is declared... no
checking whether _snwprintf is declared... no
checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for shared library run path origin... done
checking for CFPreferencesCopyAppValue... (cached) yes
checking for CFLocaleCopyCurrent... (cached) yes
checking whether included gettext is requested... no
checking for GNU gettext in libc... no
checking for GNU gettext in libintl... no
checking whether to use NLS... yes
checking where the gettext function comes from... included intl directory
Finished configuring src/extra/intl directory
using as R_SHELL for scripts ... /bin/sh
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
config.status: creating etc/Makeconf
config.status: creating etc/Renviron
config.status: creating etc/javaconf
config.status: creating etc/ldpaths
config.status: creating m4/Makefile
config.status: creating po/Makefile
config.status: creating share/Makefile
config.status: creating src/Makefile
config.status: creating src/appl/Makefile
config.status: creating src/extra/Makefile
config.status: creating src/extra/blas/Makefile
config.status: creating src/extra/bzip2/Makefile
config.status: creating src/extra/intl/Makefile
config.status: creating src/extra/pcre/Makefile
config.status: creating src/extra/tre/Makefile
config.status: creating src/extra/xdr/Makefile
config.status: creating src/extra/xz/Makefile
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config.status: creating src/include/Makefile
config.status: creating src/include/Rmath.h0
config.status: creating src/include/R_ext/Makefile
config.status: creating src/library/Recommended/Makefile
config.status: creating src/library/Makefile
config.status: creating src/library/base/DESCRIPTION
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config.status: creating src/library/compiler/DESCRIPTION
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config.status: creating src/library/datasets/DESCRIPTION
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config.status: creating src/nmath/Makefile
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config.status: creating src/scripts/Makefile
config.status: creating src/scripts/R.sh
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config.status: creating tests/Examples/Makefile
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config.status: creating src/include/config.h
config.status: executing libtool commands
config.status: executing stamp-h commands
R is now configured for x86_64-apple-darwin12.3.0
Source directory: .
Installation directory: /usr/local/Cellar/r/3.0.1
C compiler: /usr/bin/clang -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8
Fortran 77 compiler: /usr/local/bin/gfortran -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4
C++ compiler: /usr/bin/clang++ -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8
Fortran 90/95 compiler: /usr/local/bin/gfortran -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4
Obj-C compiler: /usr/bin/clang -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -fobjc-exceptions
Interfaces supported: X11, aqua
External libraries: readline, ICU, lzma
Additional capabilities: PNG, JPEG, TIFF, NLS, cairo
Options enabled: framework, shared BLAS, R profiling
Recommended packages: yes
==> make
make
make[1]: Nothing to be done for `R'.
make[1]: Nothing to be done for `R'.
make[2]: Nothing to be done for `R'.
creating src/scripts/R.fe
mkdir ../../bin
mkdir ../../include
mkdir ../../../include/R_ext
making adler32.d from adler32.c
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c blas.f -o blas.o
making blocksort.d from blocksort.c
making pcre_chartables.d from pcre_chartables.c
making bzlib.d from bzlib.c
making compress.d from compress.c
making pcre_compile.d from pcre_compile.c
making bzcompress.d from bzcompress.c
making crctable.d from crctable.c
making crc32.d from crc32.c
making pcre_config.d from pcre_config.c
making deflate.d from deflate.c
making decompress.d from decompress.c
making pcre_exec.d from pcre_exec.c
making huffman.d from huffman.c
making infback.d from infback.c
making randtable.d from randtable.c
making pcre_fullinfo.d from pcre_fullinfo.c
making inffast.d from inffast.c
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c blocksort.c -o blocksort.o
making pcre_get.d from pcre_get.c
making inflate.d from inflate.c
making pcre_globals.d from pcre_globals.c
making inftrees.d from inftrees.c
making pcre_jit_compile.d from pcre_jit_compile.c
making trees.d from trees.c
making uncompr.d from uncompr.c
making zutil.d from zutil.c
making pcre_maketables.d from pcre_maketables.c
making pcre_newline.d from pcre_newline.c
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c adler32.c -o adler32.o
making pcre_ord2utf8.d from pcre_ord2utf8.c
making pcre_refcount.d from pcre_refcount.c
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c compress.c -o compress.o
making pcre_study.d from pcre_study.c
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c crc32.c -o crc32.o
making pcre_tables.d from pcre_tables.c
making pcre_ucd.d from pcre_ucd.c
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bzlib.c -o bzlib.o
making pcre_valid_utf8.d from pcre_valid_utf8.c
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c deflate.c -o deflate.o
making pcre_version.d from pcre_version.c
making pcre_xclass.d from pcre_xclass.c
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_chartables.c -o pcre_chartables.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_compile.c -o pcre_compile.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bzcompress.c -o bzcompress.o
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c infback.c -o infback.o
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c inffast.c -o inffast.o
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c inflate.c -o inflate.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c crctable.c -o crctable.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c decompress.c -o decompress.o
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c inftrees.c -o inftrees.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_config.c -o pcre_config.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_exec.c -o pcre_exec.o
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c trees.c -o trees.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c huffman.c -o huffman.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c cmplxblas.f -o cmplxblas.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c randtable.c -o randtable.o
rm -f libbz2.a
ar cr libbz2.a blocksort.o bzlib.o bzcompress.o crctable.o decompress.o huffman.o randtable.o
ranlib libbz2.a
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c uncompr.c -o uncompr.o
/usr/bin/clang -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c zutil.c -o zutil.o
rm -f libz.a
ar cr libz.a adler32.o compress.o crc32.o deflate.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o
ranlib libz.a
making regcomp.d from regcomp.c
making bindtextdom.d from bindtextdom.c
making regerror.d from regerror.c
making dcgettext.d from dcgettext.c
making regexec.d from regexec.c
making dgettext.d from dgettext.c
making tre-ast.d from tre-ast.c
making gettext.d from gettext.c
making tre-compile.d from tre-compile.c
making finddomain.d from finddomain.c
making loadmsgcat.d from loadmsgcat.c
making textdomain.d from textdomain.c
making tre-match-approx.d from tre-match-approx.c
making l10nflist.d from l10nflist.c
making explodename.d from explodename.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making dcigettext.d from dcigettext.c
making tre-mem.d from tre-mem.c
making dcngettext.d from dcngettext.c
making tre-parse.d from tre-parse.c
making dngettext.d from dngettext.c
making tre-stack.d from tre-stack.c
making ngettext.d from ngettext.c
making xmalloc.d from xmalloc.c
making plural.d from plural.c
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c regcomp.c -o regcomp.o
making plural-exp.d from plural-exp.c
making langprefs.d from langprefs.c
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c regerror.c -o regerror.o
making localcharset.d from localcharset.c
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c regexec.c -o regexec.o
making localename.d from localename.c
making printf.d from printf.c
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tre-ast.c -o tre-ast.o
making osdep.d from osdep.c
making intl-compat.d from intl-compat.c
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tre-compile.c -o tre-compile.o
making hash-string.d from hash-string.c
making lock.d from lock.c
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bindtextdom.c -o bindtextdom.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dcgettext.c -o dcgettext.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dgettext.c -o dgettext.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gettext.c -o gettext.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c finddomain.c -o finddomain.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c loadmsgcat.c -o loadmsgcat.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tre-match-approx.c -o tre-match-approx.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c textdomain.c -o textdomain.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c l10nflist.c -o l10nflist.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c explodename.c -o explodename.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dcigettext.c -o dcigettext.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tre-match-backtrack.c -o tre-match-backtrack.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dcngettext.c -o dcngettext.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dngettext.c -o dngettext.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ngettext.c -o ngettext.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plural.c -o plural.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tre-match-parallel.c -o tre-match-parallel.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plural-exp.c -o plural-exp.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c langprefs.c -o langprefs.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c localcharset.c -o localcharset.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c localename.c -o localename.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c printf.c -o printf.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c osdep.c -o osdep.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c intl-compat.c -o intl-compat.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tre-mem.c -o tre-mem.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c hash-string.c -o hash-string.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lock.c -o lock.o
rm -f libintl.a
ar cr libintl.a bindtextdom.o dcgettext.o dgettext.o gettext.o finddomain.o loadmsgcat.o textdomain.o l10nflist.o explodename.o dcigettext.o dcngettext.o dngettext.o ngettext.o plural.o plural-exp.o langprefs.o localcharset.o localename.o printf.o osdep.o intl-compat.o hash-string.o lock.o
/usr/bin/ranlib: file: libintl.a(printf.o) has no symbols
/usr/bin/ranlib: file: libintl.a(osdep.o) has no symbols
/usr/bin/ranlib: file: libintl.a(lock.o) has no symbols
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tre-parse.c -o tre-parse.o
ranlib libintl.a
ranlib: file: libintl.a(printf.o) has no symbols
ranlib: file: libintl.a(osdep.o) has no symbols
ranlib: file: libintl.a(lock.o) has no symbols
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_fullinfo.c -o pcre_fullinfo.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tre-stack.c -o tre-stack.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c xmalloc.c -o xmalloc.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_get.c -o pcre_get.o
rm -f libtre.a
ar cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_globals.c -o pcre_globals.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_jit_compile.c -o pcre_jit_compile.o
ranlib libtre.a
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_maketables.c -o pcre_maketables.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_newline.c -o pcre_newline.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_ord2utf8.c -o pcre_ord2utf8.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_refcount.c -o pcre_refcount.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_study.c -o pcre_study.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_tables.c -o pcre_tables.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_ucd.c -o pcre_ucd.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_valid_utf8.c -o pcre_valid_utf8.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_version.c -o pcre_version.o
/usr/bin/clang -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcre_xclass.c -o pcre_xclass.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o libRblas.dylib blas.o cmplxblas.o -install_name libRblas.dylib -headerpad_max_install_names -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm # xerbla.o
mkdir /private/tmp/r-KTon/R-3.0.1/lib
rm -f libpcre.a
ar cr libpcre.a pcre_chartables.o pcre_compile.o pcre_config.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o
ranlib libpcre.a
making interv.d from interv.c
making integrate.d from integrate.c
making maxcol.d from maxcol.c
making optim.d from optim.c
making pretty.d from pretty.c
making uncmin.d from uncmin.c
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c integrate.c -o integrate.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c interv.c -o interv.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c maxcol.c -o maxcol.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c optim.c -o optim.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pretty.c -o pretty.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c uncmin.c -o uncmin.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dchdc.f -o dchdc.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dpbfa.f -o dpbfa.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dpbsl.f -o dpbsl.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dpoco.f -o dpoco.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dpodi.f -o dpodi.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dpofa.f -o dpofa.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dposl.f -o dposl.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dqrdc.f -o dqrdc.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dqrdc2.f -o dqrdc2.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dqrls.f -o dqrls.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dqrsl.f -o dqrsl.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dqrutl.f -o dqrutl.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dsvdc.f -o dsvdc.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dtrco.f -o dtrco.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dtrsl.f -o dtrsl.o
rm -f libappl.a
ar cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o
ranlib libappl.a
making d1mach.d from d1mach.c
making mlutils.d from mlutils.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making fprec.d from fprec.c
making fsign.d from fsign.c
making sign.d from sign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making bd0.d from bd0.c
making stirlerr.d from stirlerr.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making pnorm.d from pnorm.c
making dnorm.d from dnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dt.d from dt.c
making dnf.d from dnf.c
making pt.d from pt.c
making dnt.d from dnt.c
making qt.d from qt.c
making rt.d from rt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making dweibull.d from dweibull.c
making rpois.d from rpois.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnt.d from qnt.c
making qnf.d from qnf.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c mlutils.c -o mlutils.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c d1mach.c -o d1mach.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c i1mach.c -o i1mach.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fmax2.c -o fmax2.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fmin2.c -o fmin2.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fprec.c -o fprec.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fround.c -o fround.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ftrunc.c -o ftrunc.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sign.c -o sign.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fsign.c -o fsign.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c imax2.c -o imax2.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c imin2.c -o imin2.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c chebyshev.c -o chebyshev.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c log1p.c -o log1p.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c expm1.c -o expm1.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lgammacor.c -o lgammacor.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gammalims.c -o gammalims.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c stirlerr.c -o stirlerr.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bd0.c -o bd0.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gamma.c -o gamma.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lgamma.c -o lgamma.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gamma_cody.c -o gamma_cody.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c beta.c -o beta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lbeta.c -o lbeta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c polygamma.c -o polygamma.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bessel_i.c -o bessel_i.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bessel_j.c -o bessel_j.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bessel_k.c -o bessel_k.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bessel_y.c -o bessel_y.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c choose.c -o choose.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c snorm.c -o snorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sexp.c -o sexp.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dgamma.c -o dgamma.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pgamma.c -o pgamma.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qgamma.c -o qgamma.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rgamma.c -o rgamma.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dbeta.c -o dbeta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pbeta.c -o pbeta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qbeta.c -o qbeta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rbeta.c -o rbeta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dunif.c -o dunif.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c punif.c -o punif.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qunif.c -o qunif.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c runif.c -o runif.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dnorm.c -o dnorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pnorm.c -o pnorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qnorm.c -o qnorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rnorm.c -o rnorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dlnorm.c -o dlnorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plnorm.c -o plnorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qlnorm.c -o qlnorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rlnorm.c -o rlnorm.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c df.c -o df.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pf.c -o pf.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qf.c -o qf.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rf.c -o rf.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dnf.c -o dnf.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dt.c -o dt.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pt.c -o pt.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qt.c -o qt.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rt.c -o rt.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dnt.c -o dnt.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dchisq.c -o dchisq.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pchisq.c -o pchisq.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qchisq.c -o qchisq.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rchisq.c -o rchisq.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rnchisq.c -o rnchisq.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dbinom.c -o dbinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pbinom.c -o pbinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qbinom.c -o qbinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rbinom.c -o rbinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rmultinom.c -o rmultinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dcauchy.c -o dcauchy.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pcauchy.c -o pcauchy.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qcauchy.c -o qcauchy.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rcauchy.c -o rcauchy.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dexp.c -o dexp.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pexp.c -o pexp.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qexp.c -o qexp.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rexp.c -o rexp.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dgeom.c -o dgeom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pgeom.c -o pgeom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qgeom.c -o qgeom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rgeom.c -o rgeom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dhyper.c -o dhyper.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c phyper.c -o phyper.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qhyper.c -o qhyper.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rhyper.c -o rhyper.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dnbinom.c -o dnbinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pnbinom.c -o pnbinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qnbinom.c -o qnbinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rnbinom.c -o rnbinom.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dpois.c -o dpois.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ppois.c -o ppois.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qpois.c -o qpois.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rpois.c -o rpois.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dweibull.c -o dweibull.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pweibull.c -o pweibull.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qweibull.c -o qweibull.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rweibull.c -o rweibull.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dlogis.c -o dlogis.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plogis.c -o plogis.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qlogis.c -o qlogis.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rlogis.c -o rlogis.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dnchisq.c -o dnchisq.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pnchisq.c -o pnchisq.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qnchisq.c -o qnchisq.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dnbeta.c -o dnbeta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pnbeta.c -o pnbeta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qnbeta.c -o qnbeta.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pnf.c -o pnf.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pnt.c -o pnt.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qnf.c -o qnf.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qnt.c -o qnt.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ptukey.c -o ptukey.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qtukey.c -o qtukey.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c toms708.c -o toms708.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c wilcox.c -o wilcox.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c signrank.c -o signrank.o
rm -rf libnmath.a
ar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
/usr/bin/ranlib: file: libnmath.a(mlutils.o) has no symbols
/usr/bin/ranlib: file: libnmath.a(log1p.o) has no symbols
/usr/bin/ranlib: file: libnmath.a(expm1.o) has no symbols
ranlib libnmath.a
ranlib: file: libnmath.a(mlutils.o) has no symbols
ranlib: file: libnmath.a(log1p.o) has no symbols
ranlib: file: libnmath.a(expm1.o) has no symbols
config.status: creating src/unix/Makefile
making Rembedded.d from Rembedded.c
making system.d from system.c
making sys-unix.d from sys-unix.c
making dynload.d from dynload.c
making sys-std.d from sys-std.c
making X11.d from X11.c
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Rembedded.c -o Rembedded.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dynload.c -o dynload.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c system.c -o system.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sys-unix.c -o sys-unix.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sys-std.c -o sys-std.o
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c X11.c -o X11.o
rm -rf libunix.a
ar cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o
ranlib libunix.a
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DR_HOME='"/private/tmp/r-KTon/R-3.0.1"' -o Rscript \
./Rscript.c
config.status: creating src/main/Makefile
making CommandLineArgs.d from CommandLineArgs.c
making Renviron.d from Renviron.c
making Rdynload.d from Rdynload.c
making RNG.d from RNG.c
making agrep.d from agrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making deparse.d from deparse.c
making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
making dstruct.d from dstruct.c
making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
making inlined.d from inlined.c
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
making mapply.d from mapply.c
making main.d from main.c
making match.d from match.c
making memory.d from memory.c
making names.d from names.c
making objects.d from objects.c
making options.d from options.c
making platform.d from platform.c
making paste.d from paste.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making qsort.d from qsort.c
making printutils.d from printutils.c
making random.d from random.c
making raw.d from raw.c
making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making sysutils.d from sysutils.c
making summary.d from summary.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making vfonts.d from vfonts.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c CommandLineArgs.c -o CommandLineArgs.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Rdynload.c -o Rdynload.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Renviron.c -o Renviron.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c RNG.c -o RNG.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agrep.c -o agrep.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c apply.c -o apply.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c arithmetic.c -o arithmetic.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c array.c -o array.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c attrib.c -o attrib.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bind.c -o bind.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c builtin.c -o builtin.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c character.c -o character.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coerce.c -o coerce.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c colors.c -o colors.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c complex.c -o complex.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c connections.c -o connections.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c context.c -o context.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c cum.c -o cum.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dcf.c -o dcf.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c datetime.c -o datetime.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c debug.c -o debug.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c deparse.c -o deparse.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c devices.c -o devices.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dotcode.c -o dotcode.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dounzip.c -o dounzip.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dstruct.c -o dstruct.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c duplicate.c -o duplicate.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c edit.c -o edit.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c engine.c -o engine.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c envir.c -o envir.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c errors.c -o errors.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c eval.c -o eval.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c format.c -o format.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gevents.c -o gevents.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gram.c -o gram.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gram-ex.c -o gram-ex.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c graphics.c -o graphics.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c grep.c -o grep.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c identical.c -o identical.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c inlined.c -o inlined.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c inspect.c -o inspect.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c internet.c -o internet.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c iosupport.c -o iosupport.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lapack.c -o lapack.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c list.c -o list.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c localecharset.c -o localecharset.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c logic.c -o logic.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c main.c -o main.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c mapply.c -o mapply.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c match.c -o match.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c memory.c -o memory.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c names.c -o names.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c objects.c -o objects.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c options.c -o options.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c paste.c -o paste.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c platform.c -o platform.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plot.c -o plot.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plot3d.c -o plot3d.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plotmath.c -o plotmath.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c print.c -o print.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c printarray.c -o printarray.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c printvector.c -o printvector.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c printutils.c -o printutils.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qsort.c -o qsort.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c random.c -o random.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c raw.c -o raw.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c registration.c -o registration.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c relop.c -o relop.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rlocale.c -o rlocale.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c saveload.c -o saveload.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c scan.c -o scan.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c seq.c -o seq.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c serialize.c -o serialize.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sort.c -o sort.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c source.c -o source.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c split.c -o split.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sprintf.c -o sprintf.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c startup.c -o startup.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c subassign.c -o subassign.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c subscript.c -o subscript.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c subset.c -o subset.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c summary.c -o summary.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sysutils.c -o sysutils.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c unique.c -o unique.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c util.c -o util.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c version.c -o version.o
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c vfonts.c -o vfonts.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c xxxpr.f -o xxxpr.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -install_name libR.dylib -compatibility_version 3.0.0 -current_version 3.0.1 -headerpad_max_install_names -o libR.dylib CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/tre/libtre.a ../extra/intl/libintl.a -L../../lib -lRblas -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -Wl,-framework -Wl,CoreFoundation -lreadline -llzma -licucore -lm -liconv
mkdir /private/tmp/r-KTon/R-3.0.1/bin/exec
/usr/bin/clang -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Rmain.c -o Rmain.o
/usr/bin/clang -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o R.bin Rmain.o -L../../lib -lR -lRblas
making devX11.d from devX11.c
making Lapack.d from Lapack.c
making Rhttpd.d from Rhttpd.c
making g_alab_her.d from g_alab_her.c
making Rsock.d from Rsock.c
making g_cntrlify.d from g_cntrlify.c
making internet.d from internet.c
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -ffloat-store -c dlamch.f -o dlamch.o
making g_fontdb.d from g_fontdb.c
making g_her_glyph.d from g_her_glyph.c
making nanoftp.d from nanoftp.c
making nanohttp.d from nanohttp.c
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dlapack.f -o dlapack.o
making rotated.d from rotated.c
making sock.d from sock.c
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c g_alab_her.c -o g_alab_her.o
making sockconn.d from sockconn.c
making rbitmap.d from rbitmap.c
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Rhttpd.c -o Rhttpd.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c g_cntrlify.c -o g_cntrlify.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -D_REENTRANT -I/usr/local/Cellar/pango/1.34.1/include/pango-1.0 -I/usr/local/Cellar/cairo/1.12.14/include/cairo -I/usr/local/Cellar/glib/2.36.2/include/glib-2.0 -I/usr/local/Cellar/glib/2.36.2/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/pixman/0.30.0/include/pixman-1 -I/usr/local/Cellar/fontconfig/2.10.92/include -I/usr/local/Cellar/freetype/2.4.11/include/freetype2 -I/usr/local/Cellar/freetype/2.4.11/include -I/usr/local/Cellar/libpng/1.5.14/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c devX11.c -o devX11.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c g_fontdb.c -o g_fontdb.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c g_her_glyph.c -o g_her_glyph.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Rsock.c -o Rsock.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o vfonts.so g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c internet.c -o internet.o
mkdir /private/tmp/r-KTon/R-3.0.1/modules
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -D_REENTRANT -I/usr/local/Cellar/pango/1.34.1/include/pango-1.0 -I/usr/local/Cellar/cairo/1.12.14/include/cairo -I/usr/local/Cellar/glib/2.36.2/include/glib-2.0 -I/usr/local/Cellar/glib/2.36.2/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/pixman/0.30.0/include/pixman-1 -I/usr/local/Cellar/fontconfig/2.10.92/include -I/usr/local/Cellar/freetype/2.4.11/include/freetype2 -I/usr/local/Cellar/freetype/2.4.11/include -I/usr/local/Cellar/libpng/1.5.14/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rotated.c -o rotated.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nanoftp.c -o nanoftp.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nanohttp.c -o nanohttp.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sock.c -o sock.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -D_REENTRANT -I/usr/local/Cellar/pango/1.34.1/include/pango-1.0 -I/usr/local/Cellar/cairo/1.12.14/include/cairo -I/usr/local/Cellar/glib/2.36.2/include/glib-2.0 -I/usr/local/Cellar/glib/2.36.2/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/pixman/0.30.0/include/pixman-1 -I/usr/local/Cellar/fontconfig/2.10.92/include -I/usr/local/Cellar/freetype/2.4.11/include/freetype2 -I/usr/local/Cellar/freetype/2.4.11/include -I/usr/local/Cellar/libpng/1.5.14/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rbitmap.c -o rbitmap.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -D_REENTRANT -I/usr/local/Cellar/pango/1.34.1/include/pango-1.0 -I/usr/local/Cellar/cairo/1.12.14/include/cairo -I/usr/local/Cellar/glib/2.36.2/include/glib-2.0 -I/usr/local/Cellar/glib/2.36.2/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/pixman/0.30.0/include/pixman-1 -I/usr/local/Cellar/fontconfig/2.10.92/include -I/usr/local/Cellar/freetype/2.4.11/include/freetype2 -I/usr/local/Cellar/freetype/2.4.11/include -I/usr/local/Cellar/libpng/1.5.14/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dataentry.c -o dataentry.o
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sockconn.c -o sockconn.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o R_X11.so devX11.o rotated.o rbitmap.o -lSM -lICE -L/usr/local/Cellar/pango/1.34.1/lib -L/usr/local/Cellar/glib/2.36.2/lib -L/usr/local/opt/gettext/lib -L/usr/local/Cellar/libpng/1.5.14/lib -L/usr/local/Cellar/cairo/1.12.14/lib -L/opt/X11/lib -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lintl -lpng15 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -ltiff -ljpeg -lpng -lz -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c cmplx.f -o cmplx.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o internet.so Rhttpd.o Rsock.o internet.o nanoftp.o nanohttp.o sock.o sockconn.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o R_de.so dataentry.o -lSM -lICE -L/usr/local/Cellar/pango/1.34.1/lib -L/usr/local/Cellar/glib/2.36.2/lib -L/usr/local/opt/gettext/lib -L/usr/local/Cellar/libpng/1.5.14/lib -L/usr/local/Cellar/cairo/1.12.14/lib -L/opt/X11/lib -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lintl -lpng15 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o libRlapack.dylib dlamch.o dlapack.o cmplx.o -install_name libRlapack.dylib -compatibility_version 3.0.0 -current_version 3.0.1 -headerpad_max_install_names -L../../../lib -lRblas -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib
/usr/bin/clang -I. -I../../../src/include -I../../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Lapack.c -o Lapack.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o lapack.so Lapack.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation -L../../../lib -lRlapack -L../../../lib -lRblas -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm
/private/tmp/r-KTon/R-3.0.1/lib/libRlapack.dylib is unchanged
mkdir ../../library
building system startup profile
mkdir ../../../library/base
mkdir ../../../library/base/R
building package 'translations'
mkdir ../../../library/translations
building package 'base'
mkdir ../../../library/base/demo
building package 'tools'
mkdir ../../../library/tools
mkdir ../../../library/tools/R
making text.d from text.c
making init.d from init.c
making Rmd5.d from Rmd5.c
making md5.d from md5.c
making signals.d from signals.c
making install.d from install.c
making getfmts.d from getfmts.c
making http.d from http.c
making gramLatex.d from gramLatex.c
making gramRd.d from gramRd.c
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c text.c -o text.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Rmd5.c -o Rmd5.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c md5.c -o md5.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c signals.c -o signals.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c install.c -o install.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c getfmts.c -o getfmts.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c http.c -o http.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gramLatex.c -o gramLatex.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gramRd.c -o gramRd.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/tools/libs
building package 'compiler'
mkdir ../../../library/compiler
mkdir ../../../library/compiler/R
byte-compiling package 'compiler'
byte-compiling package 'base'
byte-compiling package 'tools'
building package 'utils'
mkdir ../../../library/utils
mkdir ../../../library/utils/doc
mkdir ../../../library/utils/R
mkdir ../../../library/utils/Sweave
mkdir ../../../library/utils/misc
making init.d from init.c
making io.d from io.c
making size.d from size.c
making sock.d from sock.c
making stubs.d from stubs.c
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
making utils.d from utils.c
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c io.c -o io.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c size.c -o size.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sock.c -o sock.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c stubs.c -o stubs.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c utils.c -o utils.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o utils.so init.o io.o size.o sock.o stubs.o utils.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/utils/libs
byte-compiling package 'utils'
building package 'grDevices'
mkdir ../../../library/grDevices
mkdir ../../../library/grDevices/R
mkdir ../../../library/grDevices/afm
mkdir ../../../library/grDevices/enc
mkdir ../../../library/grDevices/icc
making axis_scales.d from axis_scales.c
making init.d from init.c
making chull.d from chull.c
making devices.d from devices.c
making stubs.d from stubs.c
making colors.d from colors.c
making devCairo.d from devCairo.c
making devPicTeX.d from devPicTeX.c
making devPS.d from devPS.c
making devQuartz.d from devQuartz.c
making qdPDF.d from qdPDF.c
making qdBitmap.d from qdBitmap.c
making qdCocoa.d from qdCocoa.m
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c axis_scales.c -o axis_scales.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c chull.c -o chull.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c devices.c -o devices.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c stubs.c -o stubs.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c colors.c -o colors.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c devCairo.c -o devCairo.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c devPicTeX.c -o devPicTeX.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c devPS.c -o devPS.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c devQuartz.c -o devQuartz.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qdBitmap.c -o qdBitmap.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qdPDF.c -o qdPDF.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -fobjc-exceptions -c qdCocoa.m -o qdCocoa.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o qdBitmap.o qdPDF.o qdCocoa.o -framework AppKit ../../../../src/extra/zlib/libz.a -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/grDevices/libs
making cairoBM.d from cairoBM.c
make[8]: `Makedeps' is up to date.
/usr/bin/clang -I. -I../../../../../src/include -I../../../../../src/include -D_REENTRANT -I/usr/local/Cellar/pango/1.34.1/include/pango-1.0 -I/usr/local/Cellar/cairo/1.12.14/include/cairo -I/usr/local/Cellar/glib/2.36.2/include/glib-2.0 -I/usr/local/Cellar/glib/2.36.2/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/pixman/0.30.0/include/pixman-1 -I/usr/local/Cellar/fontconfig/2.10.92/include -I/usr/local/Cellar/freetype/2.4.11/include/freetype2 -I/usr/local/Cellar/freetype/2.4.11/include -I/usr/local/Cellar/libpng/1.5.14/include/libpng15 -I/opt/X11/include -I../../../../../src/modules/X11 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c cairoBM.c -o cairoBM.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -L/usr/local/Cellar/pango/1.34.1/lib -L/usr/local/Cellar/glib/2.36.2/lib -L/usr/local/opt/gettext/lib -L/usr/local/Cellar/libpng/1.5.14/lib -L/usr/local/Cellar/cairo/1.12.14/lib -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lintl -lpng15 -lz -lcairo -ltiff -ljpeg -lpng -lz -L../../../../../lib -lR -dylib_file libRblas.dylib:../../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
byte-compiling package 'grDevices'
building package 'graphics'
mkdir ../../../library/graphics
mkdir ../../../library/graphics/R
making init.d from init.c
making graphics.d from graphics.c
making base.d from base.c
making par.d from par.c
making plot.d from plot.c
making plot3d.d from plot3d.c
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
making stem.d from stem.c
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c base.c -o base.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c graphics.c -o graphics.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c par.c -o par.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plot.c -o plot.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c plot3d.c -o plot3d.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c stem.c -o stem.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/graphics/libs
byte-compiling package 'graphics'
building package 'stats'
mkdir ../../../library/stats
mkdir ../../../library/stats/R
making kmeans.d from kmeans.c
making ansari.d from ansari.c
making init.d from init.c
making bandwidths.d from bandwidths.c
making chisqsim.d from chisqsim.c
making d2x2xk.d from d2x2xk.c
making fexact.d from fexact.c
making kendall.d from kendall.c
making ks.d from ks.c
making line.d from line.c
making prho.d from prho.c
making smooth.d from smooth.c
making swilk.d from swilk.c
making ksmooth.d from ksmooth.c
making loessc.d from loessc.c
making monoSpl.d from monoSpl.c
making isoreg.d from isoreg.c
making dblcen.d from dblcen.c
making Srunmed.d from Srunmed.c
making distance.d from distance.c
making nls.d from nls.c
making hclust-utils.d from hclust-utils.c
making rWishart.d from rWishart.c
making HoltWinters.d from HoltWinters.c
making PPsum.d from PPsum.c
making arima.d from arima.c
making burg.d from burg.c
making filter.d from filter.c
making mAR.d from mAR.c
making pacf.d from pacf.c
making starma.d from starma.c
making port.d from port.c
making family.d from family.c
making sbart.d from sbart.c
making approx.d from approx.c
making loglin.d from loglin.c
making lowess.d from lowess.c
making massdist.d from massdist.c
making splines.d from splines.c
making lm.d from lm.c
making complete_cases.d from complete_cases.c
making cov.d from cov.c
making deriv.d from deriv.c
making fft.d from fft.c
making fourier.d from fourier.c
making model.d from model.c
making optim.d from optim.c
making optimize.d from optimize.c
making integrate.d from integrate.c
making random.d from random.c
making distn.d from distn.c
making rcont.d from rcont.c
making zeroin.d from zeroin.c
making influence.d from influence.c
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c kmeans.c -o kmeans.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ansari.c -o ansari.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bandwidths.c -o bandwidths.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c chisqsim.c -o chisqsim.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c d2x2xk.c -o d2x2xk.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fexact.c -o fexact.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c kendall.c -o kendall.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ks.c -o ks.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c line.c -o line.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c smooth.c -o smooth.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c prho.c -o prho.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c swilk.c -o swilk.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ksmooth.c -o ksmooth.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c loessc.c -o loessc.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c monoSpl.c -o monoSpl.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c isoreg.c -o isoreg.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Srunmed.c -o Srunmed.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dblcen.c -o dblcen.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c distance.c -o distance.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c hclust-utils.c -o hclust-utils.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nls.c -o nls.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rWishart.c -o rWishart.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c HoltWinters.c -o HoltWinters.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c PPsum.c -o PPsum.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c arima.c -o arima.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c burg.c -o burg.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c filter.c -o filter.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c mAR.c -o mAR.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pacf.c -o pacf.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c starma.c -o starma.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c port.c -o port.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c family.c -o family.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sbart.c -o sbart.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c approx.c -o approx.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c loglin.c -o loglin.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lowess.c -o lowess.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c massdist.c -o massdist.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c splines.c -o splines.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lm.c -o lm.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c complete_cases.c -o complete_cases.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c cov.c -o cov.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c deriv.c -o deriv.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fft.c -o fft.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fourier.c -o fourier.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c model.c -o model.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c optim.c -o optim.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c optimize.c -o optimize.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c integrate.c -o integrate.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c random.c -o random.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c distn.c -o distn.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c zeroin.c -o zeroin.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rcont.c -o rcont.o
/usr/bin/clang -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c influence.c -o influence.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c bsplvd.f -o bsplvd.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c bvalue.f -o bvalue.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c bvalus.f -o bvalus.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c loessf.f -o loessf.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c ppr.f -o ppr.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c qsbart.f -o qsbart.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c sgram.f -o sgram.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c sinerp.f -o sinerp.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c sslvrg.f -o sslvrg.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c stxwx.f -o stxwx.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c hclust.f -o hclust.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c kmns.f -o kmns.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c eureka.f -o eureka.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c stl.f -o stl.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -ffloat-store -c portsrc.f -o portsrc.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c lminfl.f -o lminfl.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -L../../../../lib -lRlapack -L../../../../lib -lRblas -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/stats/libs
byte-compiling package 'stats'
building package 'datasets'
mkdir ../../../library/datasets
mkdir ../../../library/datasets/data
building package 'methods'
mkdir ../../../library/methods
mkdir ../../../library/methods/R
making methods_list_dispatch.d from methods_list_dispatch.c
making do_substitute_direct.d from do_substitute_direct.c
making slot.d from slot.c
making init.d from init.c
making class_support.d from class_support.c
making utils.d from utils.c
making tests.d from tests.c
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c do_substitute_direct.c -o do_substitute_direct.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c methods_list_dispatch.c -o methods_list_dispatch.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c slot.c -o slot.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c class_support.c -o class_support.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tests.c -o tests.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c utils.c -o utils.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/methods/libs
byte-compiling 'methods'
initializing class and method definitions ... done
building package 'grid'
mkdir ../../../library/grid
mkdir ../../../library/grid/doc
mkdir ../../../library/grid/R
making gpar.d from gpar.c
making grid.d from grid.c
making layout.d from layout.c
making just.d from just.c
making matrix.d from matrix.c
making register.d from register.c
making state.d from state.c
making unit.d from unit.c
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gpar.c -o gpar.o
making util.d from util.c
making viewport.d from viewport.c
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c grid.c -o grid.o
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c just.c -o just.o
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c layout.c -o layout.o
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c matrix.c -o matrix.o
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c register.c -o register.o
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c state.c -o state.o
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c unit.c -o unit.o
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c util.c -o util.o
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c viewport.c -o viewport.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/grid/libs
byte-compiling package 'grid'
building package 'splines'
mkdir ../../../library/splines
mkdir ../../../library/splines/R
/usr/bin/clang -I../../../../include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c splines.c -o splines.o
making splines.d from splines.c
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o splines.so splines.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/splines/libs
byte-compiling package 'splines'
building package 'stats4'
mkdir ../../../library/stats4
mkdir ../../../library/stats4/R
byte-compiling package 'stats4'
building package 'tcltk'
mkdir ../../../library/tcltk
mkdir ../../../library/tcltk/R
mkdir ../../../library/tcltk/exec
building package 'parallel'
mkdir ../../../library/parallel
mkdir ../../../library/parallel/doc
mkdir ../../../library/parallel/R
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
making rngstream.d from rngstream.c
making fork.d from fork.c
making init.d from init.c
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rngstream.c -o rngstream.o
/usr/bin/clang -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fork.c -o fork.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/parallel/libs
byte-compiling package 'parallel'
installing parsed NAMESPACE files
make[1]: Nothing to be done for `R'.
you should 'make docs' now ...
configuring Java ...
Java interpreter : /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/bin/java
Java version : 1.6.0_45
Java home path : /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home
creating NEWS
creating NEWS.pdf
Java compiler : /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/bin/javac
Java headers gen.: /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/bin/javah
Java archive tool: /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/bin/jar
System Java on OS X
trying to compile and link a JNI progam
detected JNI cpp flags : -I/System/Library/Frameworks/JavaVM.framework/Headers
detected JNI linker flags : -framework JavaVM
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/System/Library/Frameworks/JavaVM.framework/Headers -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c conftest.c -o conftest.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o conftest.so conftest.o -framework JavaVM -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
Java library path:
JNI cpp flags : -I/System/Library/Frameworks/JavaVM.framework/Headers
JNI linker flags : -framework JavaVM
Updating Java configuration in /private/tmp/r-KTon/R-3.0.1
Done.
creating doc/manual/version.texi
creating doc/manual/R-FAQ.html
creating doc/manual/R-data.html
creating doc/manual/R-admin.html
creating doc/manual/R-exts.html
creating doc/manual/R-intro.html
creating doc/manual/R-ints.html
creating doc/manual/R-lang.html
installing parsed Rd
methods
utils
graphics
grDevices
datasets
grid
tools
tcltk
splines
stats4
compiler
parallel
stats
base
building/updating package metadata ...
writing package indices
begin installing recommended package MASS
begin installing recommended package lattice
begin installing recommended package survival
begin installing recommended package codetools
* installing *source* package 'codetools' ...
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (codetools)
begin installing recommended package foreign
* installing *source* package 'foreign' ...
** package 'foreign' successfully unpacked and MD5 sums checked
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c R_systat.c -o R_systat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Rdbfread.c -o Rdbfread.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Rdbfwrite.c -o Rdbfwrite.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c SASxport.c -o SASxport.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c avl.c -o avl.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dbfopen.c -o dbfopen.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c file-handle.c -o file-handle.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c format.c -o format.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c minitab.c -o minitab.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pfm-read.c -o pfm-read.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sfm-read.c -o sfm-read.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c spss.c -o spss.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c stataread.c -o stataread.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/foreign/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (foreign)
begin installing recommended package KernSmooth
* installing *source* package 'KernSmooth' ...
** package 'KernSmooth' successfully unpacked and MD5 sums checked
** libs
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c blkest.f -o blkest.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c cp.f -o cp.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dgedi.f -o dgedi.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dgefa.f -o dgefa.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dgesl.f -o dgesl.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c linbin.f -o linbin.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c linbin2D.f -o linbin2D.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c locpoly.f -o locpoly.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c rlbin.f -o rlbin.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c sdiag.f -o sdiag.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c sstdiag.f -o sstdiag.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -L/private/tmp/r-KTon/R-3.0.1/lib -lRblas -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/KernSmooth/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (KernSmooth)
begin installing recommended package rpart
* installing *source* package 'MASS' ...
** package 'MASS' successfully unpacked and MD5 sums checked
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c MASS.c -o MASS.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lqs.c -o lqs.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o MASS.so MASS.o lqs.o -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/MASS/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (MASS)
begin installing recommended package nnet
* installing *source* package 'rpart' ...
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c anova.c -o anova.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c anovapred.c -o anovapred.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c branch.c -o branch.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c bsplit.c -o bsplit.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c choose_surg.c -o choose_surg.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fix_cp.c -o fix_cp.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c free_tree.c -o free_tree.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gini.c -o gini.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c graycode.c -o graycode.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c insert_split.c -o insert_split.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c make_cp_list.c -o make_cp_list.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c make_cp_table.c -o make_cp_table.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c mysort.c -o mysort.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nodesplit.c -o nodesplit.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c partition.c -o partition.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c poisson.c -o poisson.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pred_rpart.c -o pred_rpart.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c print_tree.c -o print_tree.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rpart.c -o rpart.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rpart_callback.c -o rpart_callback.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rpartexp.c -o rpartexp.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rpartexp2.c -o rpartexp2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rpcountup.c -o rpcountup.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rpmatrix.c -o rpmatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rundown.c -o rundown.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c rundown2.c -o rundown2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c surrogate.c -o surrogate.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c usersplit.c -o usersplit.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c xpred.c -o xpred.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c xval.c -o xval.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/rpart/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'longintro.Rnw'
'usercode.Rnw'
** testing if installed package can be loaded
* DONE (rpart)
begin installing recommended package spatial
* installing *source* package 'nnet' ...
** package 'nnet' successfully unpacked and MD5 sums checked
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nnet.c -o nnet.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o nnet.so nnet.o -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/nnet/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (nnet)
begin installing recommended package cluster
* installing *source* package 'lattice' ...
** package 'lattice' successfully unpacked and MD5 sums checked
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c threeDplot.c -o threeDplot.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o lattice.so init.o threeDplot.o -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/lattice/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (lattice)
begin installing recommended package class
* installing *source* package 'spatial' ...
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c krc.c -o krc.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pps.c -o pps.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o spatial.so init.o krc.o pps.o -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/spatial/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (spatial)
begin installing recommended package Matrix
* installing *source* package 'class' ...
** package 'class' successfully unpacked and MD5 sums checked
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c class.c -o class.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o class.so class.o -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/class/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (class)
begin installing recommended package nlme
* installing *source* package 'cluster' ...
** package 'cluster' successfully unpacked and MD5 sums checked
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c clara.c -o clara.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c daisy.f -o daisy.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c dysta.f -o dysta.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c fanny.c -o fanny.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c mona.f -o mona.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pam.c -o pam.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sildist.c -o sildist.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c spannel.c -o spannel.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c twins.c -o twins.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/cluster/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (cluster)
* installing *source* package 'survival' ...
** package 'survival' successfully unpacked and MD5 sums checked
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agexact.c -o agexact.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agfit3.c -o agfit3.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agfit5.c -o agfit5.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agmart.c -o agmart.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agmart2.c -o agmart2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agscore.c -o agscore.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agsurv3.c -o agsurv3.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agsurv4.c -o agsurv4.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c agsurv5.c -o agsurv5.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c chinv2.c -o chinv2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c chinv3.c -o chinv3.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c cholesky2.c -o cholesky2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c cholesky3.c -o cholesky3.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c chsolve2.c -o chsolve2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c chsolve3.c -o chsolve3.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c concordance1.c -o concordance1.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c cox_Rcallback.c -o cox_Rcallback.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxcount1.c -o coxcount1.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxdetail.c -o coxdetail.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxexact.c -o coxexact.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxfit2.c -o coxfit2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxfit5.c -o coxfit5.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxfit6.c -o coxfit6.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxmart.c -o coxmart.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxmart2.c -o coxmart2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxph_wtest.c -o coxph_wtest.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxsafe.c -o coxsafe.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxscho.c -o coxscho.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c coxscore.c -o coxscore.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dmatrix.c -o dmatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c doloop.c -o doloop.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c msurv.c -o msurv.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pyears1.c -o pyears1.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pyears2.c -o pyears2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pyears3b.c -o pyears3b.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pystep.c -o pystep.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survConcordance.c -o survConcordance.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survdiff2.c -o survdiff2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survfit4.c -o survfit4.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survfitci.c -o survfitci.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survpenal.c -o survpenal.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survreg6.c -o survreg6.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survreg7.c -o survreg7.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survregc1.c -o survregc1.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c survregc2.c -o survregc2.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o survival.so agexact.o agfit3.o agfit5.o agmart.o agmart2.o agscore.o agsurv3.o agsurv4.o agsurv5.o chinv2.o chinv3.o cholesky2.o cholesky3.o chsolve2.o chsolve3.o concordance1.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit2.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore.o dmatrix.o doloop.o init.o msurv.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/survival/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'timedep.Rnw'
** testing if installed package can be loaded
* DONE (survival)
begin installing recommended package boot
* installing *source* package 'boot' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (boot)
* installing *source* package 'nlme' ...
** libs
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c chol.f -o chol.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c corStruct.c -o corStruct.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gnls.c -o gnls.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c matrix.c -o matrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nlOptimizer.c -o nlOptimizer.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nlme.c -o nlme.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nlmefit.c -o nlmefit.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c nls.c -o nls.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c pdMat.c -o pdMat.o
/usr/local/bin/gfortran -fPIC -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -c rs.f -o rs.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o nls.o pdMat.o rs.o -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/nlme/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (nlme)
* installing *source* package 'Matrix' ...
** package 'Matrix' successfully unpacked and MD5 sums checked
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c CHMfactor.c -o CHMfactor.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Csparse.c -o Csparse.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c TMatrix_as.c -o TMatrix_as.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Tsparse.c -o Tsparse.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c Mutils.c -o Mutils.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c chm_common.c -o chm_common.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c cs.c -o cs.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c cs_utils.c -o cs_utils.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dense.c -o dense.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dgCMatrix.c -o dgCMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dgTMatrix.c -o dgTMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dgeMatrix.c -o dgeMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dpoMatrix.c -o dpoMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dppMatrix.c -o dppMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dsCMatrix.c -o dsCMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dsyMatrix.c -o dsyMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dspMatrix.c -o dspMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dtCMatrix.c -o dtCMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dtTMatrix.c -o dtTMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dtrMatrix.c -o dtrMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c dtpMatrix.c -o dtpMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c factorizations.c -o factorizations.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ldense.c -o ldense.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c lgCMatrix.c -o lgCMatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sparseQR.c -o sparseQR.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c abIndex.c -o abIndex.o
( cd Lib ; make clean )
( cd Source ; make clean )
( cd Source ; make clean )
( cd Lib ; make )
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_aat.c -o cholmod_aat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_add.c -o cholmod_add.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_band.c -o cholmod_band.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_common.c -o cholmod_common.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_complex.c -o cholmod_complex.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_copy.c -o cholmod_copy.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_dense.c -o cholmod_dense.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_error.c -o cholmod_error.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_factor.c -o cholmod_factor.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_memory.c -o cholmod_memory.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_sparse.c -o cholmod_sparse.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_transpose.c -o cholmod_transpose.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Core/cholmod_triplet.c -o cholmod_triplet.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Check/cholmod_check.c -o cholmod_check.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Check/cholmod_read.c -o cholmod_read.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Check/cholmod_write.c -o cholmod_write.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Modify/cholmod_updown.c -o cholmod_updown.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_aat.c -o cholmod_l_aat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_add.c -o cholmod_l_add.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_band.c -o cholmod_l_band.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_common.c -o cholmod_l_common.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_complex.c -o cholmod_l_complex.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_copy.c -o cholmod_l_copy.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_dense.c -o cholmod_l_dense.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_error.c -o cholmod_l_error.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_factor.c -o cholmod_l_factor.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_memory.c -o cholmod_l_memory.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_sparse.c -o cholmod_l_sparse.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_transpose.c -o cholmod_l_transpose.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Core/cholmod_triplet.c -o cholmod_l_triplet.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Check/cholmod_check.c -o cholmod_l_check.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Check/cholmod_read.c -o cholmod_l_read.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Check/cholmod_write.c -o cholmod_l_write.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Modify/cholmod_updown.c -o cholmod_l_updown.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DDLONG -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o
ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o
( cd Source ; make lib )
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c colamd_global.c -o colamd_global.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c colamd.c -o colamd.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c colamd.c -o colamd_l.o
ar -rucs ../../COLAMD.a colamd_global.o colamd.o colamd_l.o
( cd Source ; make lib )
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_1.c -o amd_i_1.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_1.c -o amd_l_1.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_2.c -o amd_i_2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_2.c -o amd_l_2.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_order.c -o amd_i_order.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_order.c -o amd_l_order.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_control.c -o amd_i_control.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_control.c -o amd_l_control.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_info.c -o amd_i_info.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_info.c -o amd_l_info.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDINT -c amd_global.c -o amd_i_global.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I../Include -DDLONG -c amd_global.c -o amd_l_global.o
ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o amd_i_global.o amd_l_global.o
/usr/bin/ranlib: file: ../../AMD.a(amd_i_dump.o) has no symbols
/usr/bin/ranlib: file: ../../AMD.a(amd_l_dump.o) has no symbols
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -DNTIMER -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c SuiteSparse_config.c -o SuiteSparse_config.o
ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -L/private/tmp/r-KTon/R-3.0.1/lib -lRlapack -L/private/tmp/r-KTon/R-3.0.1/lib -lRblas -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/Matrix/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'image' from package 'graphics' in package 'Matrix'
Creating a generic function for 'solve' from package 'base' in package 'Matrix'
Creating a generic function for 'chol2inv' from 'base' in package 'Matrix'
(from the saved implicit definition)
Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix'
Creating a generic function for 'determinant' from package 'base' in package 'Matrix'
Creating a generic function for 'update' from package 'stats' in package 'Matrix'
Creating a generic function for 't' from package 'base' in package 'Matrix'
Creating a generic function for 'diag' from package 'base' in package 'Matrix'
Creating a generic function for 'as.matrix' from package 'base' in package 'Matrix'
Creating a generic function for 'as.array' from package 'base' in package 'Matrix'
Creating a generic function for 'head' from package 'utils' in package 'Matrix'
Creating a generic function for 'tail' from package 'utils' in package 'Matrix'
Creating a generic function for 'drop' from package 'base' in package 'Matrix'
Creating a generic function for 'as.vector' from package 'base' in package 'Matrix'
Creating a generic function for 'mean' from package 'base' in package 'Matrix'
Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix'
Creating a generic function for 'isSymmetric' from package 'base' in package 'Matrix'
Creating a generic function for 'unname' from package 'base' in package 'Matrix'
Creating a generic function for 'chol' from package 'base' in package 'Matrix'
Creating a generic function for 'norm' from package 'base' in package 'Matrix'
Creating a generic function for 'rcond' from 'base' in package 'Matrix'
(from the saved implicit definition)
Creating a generic function for 'rcond' from package 'base' in package 'Matrix'
Creating a generic function for 'all.equal' from package 'base' in package 'Matrix'
Creating a generic function for 'diff' from package 'base' in package 'Matrix'
in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"dsparseMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"CsparseMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"CsparseMatrix","matrix.coo"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"CsparseMatrix","matrix.csc"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc"
Creating a generic function for 'colSums' from package 'base' in package 'Matrix'
Creating a generic function for 'colMeans' from package 'base' in package 'Matrix'
Creating a generic function for 'rowSums' from package 'base' in package 'Matrix'
Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix'
in method for 'colSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'rowSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'colMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'rowMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix'
Creating a generic function for 'qr' from package 'base' in package 'Matrix'
Creating a generic function for 'diag<-' from package 'base' in package 'Matrix'
Creating a generic function for 'crossprod' from package 'base' in package 'Matrix'
Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix'
Creating a generic function for 'print' from package 'base' in package 'Matrix'
Creating a generic function for 'summary' from package 'base' in package 'Matrix'
Creating a generic function for 'which' from package 'base' in package 'Matrix'
in method for 'coerce' with signature '"graphAM","sparseMatrix"': no definition for class "graphAM"
in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph"
in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph"
in method for 'coerce' with signature '"graphNEL","CsparseMatrix"': no definition for class "graphNEL"
in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL"
in method for 'coerce' with signature '"sparseMatrix","graph"': no definition for class "graph"
in method for 'coerce' with signature '"sparseMatrix","graphNEL"': no definition for class "graphNEL"
in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL"
Creating a generic function for 'format' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.R' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix'
** help
*** installing help indices
** building package indices
Loading required package: Matrix
** installing vignettes
'Comparisons.Rnw'
'Design-issues.Rnw'
'Intro2Matrix.Rnw'
'Introduction.Rnw'
'sparseModels.Rnw'
** testing if installed package can be loaded
* DONE (Matrix)
begin installing recommended package mgcv
* installing *source* package 'mgcv' ...
** libs
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c gdi.c -o gdi.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c init.c -o init.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c magic.c -o magic.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c mat.c -o mat.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c matrix.c -o matrix.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c mgcv.c -o mgcv.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c misc.c -o misc.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c qp.c -o qp.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c soap.c -o soap.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c sparse-smooth.c -o sparse-smooth.o
/usr/bin/clang -I/private/tmp/r-KTon/R-3.0.1/include -DNDEBUG -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c tprs.c -o tprs.o
/usr/bin/clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o mgcv.so gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o qp.o soap.o sparse-smooth.o tprs.o -L/private/tmp/r-KTon/R-3.0.1/lib -lRlapack -L/private/tmp/r-KTon/R-3.0.1/lib -lRblas -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib/gcc/x86_64-apple-darwin12.3.0/4.8.0 -L/usr/local/Cellar/gfortran/4.8.0/gfortran/lib -lgfortran -lquadmath -lm -L/private/tmp/r-KTon/R-3.0.1/lib -lR -dylib_file libRblas.dylib:/private/tmp/r-KTon/R-3.0.1/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/r-KTon/R-3.0.1/library/mgcv/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (mgcv)
building/updating vignettes for package 'grid' ...
building/updating vignettes for package 'parallel' ...
building/updating vignettes for package 'utils' ...
==> make install
make install
mkdir /usr/local/Cellar/r/3.0.1/R.framework
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources
make[1]: Nothing to be done for `install'.
make[1]: Nothing to be done for `install'.
installing doc ...
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/doc
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/man1
installing doc/html ...
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/doc/html
installing doc/manual ...
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/doc/manual
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/etc
installing etc ...
installing share ...
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/R
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/dictionaries
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/encodings
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/java
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/licenses
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/make
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/sh
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/texmf
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/texmf/bibtex
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/texmf/bibtex/bib
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/texmf/bibtex/bst
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/texmf/tex
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/share/texmf/tex/latex
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/bin
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/include
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/include/R_ext
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/lib
make[3]: Nothing to be done for `install'.
make[3]: Nothing to be done for `install'.
make[3]: Nothing to be done for `install'.
make[3]: Nothing to be done for `install'.
make[3]: Nothing to be done for `install'.
make[3]: Nothing to be done for `install'.
make[3]: Nothing to be done for `install'.
make[2]: Nothing to be done for `install'.
make[2]: Nothing to be done for `install'.
/usr/bin/clang -I. -I../../src/include -I../../src/include -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -DHAVE_CONFIG_H -fPIC -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -DR_HOME='"/usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources"' -o Rscript \
./Rscript.c
mkdir /usr/local/Cellar/r/3.0.1/lib
mkdir /usr/local/Cellar/r/3.0.1/lib/pkgconfig
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/bin/exec
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/modules
mkdir /usr/local/Cellar/r/3.0.1/R.framework/Versions/3.0/Resources/library
installing packages ...
building HTML index ...
make[1]: Nothing to be done for `install'.
make -f ./Makefile.fw top_srcdir=. install
Creating R framework ...
libRlapack
libRblas
libR
==> Downloading http://rcompletion.googlecode.com/svn-history/r28/trunk/bash_completion/R
Already downloaded: /Library/Caches/Homebrew/R
==> Cleaning
==> Caveats
R.framework was installed to:
/usr/local/opt/r/R.framework
To use this Framework with IDEs such as RStudio, it must be linked
to the standard OS X location:
sudo ln -s "/usr/local/opt/r/R.framework" /Library/Frameworks
To enable rJava support, run the following command:
R CMD javareconf JAVA_CPPFLAGS=-I/System/Library/Frameworks/JavaVM.framework/Headers
Bash completion has been installed to:
/usr/local/etc/bash_completion.d
==> Finishing up
ln -s ../../Cellar/r/3.0.1/etc/bash_completion.d/R R
ln -s ../Cellar/r/3.0.1/bin/Rscript Rscript
ln -s ../Cellar/r/3.0.1/bin/R R
ln -s ../../../Cellar/r/3.0.1/share/man/man1/Rscript.1 Rscript.1
ln -s ../../../Cellar/r/3.0.1/share/man/man1/R.1 R.1
ln -s ../../Cellar/r/3.0.1/lib/pkgconfig/libR.pc libR.pc
ln -s ../../Cellar/r/3.0.1 r
ln -s ../Cellar/r/3.0.1 r
==> Summary
🍺 /usr/local/Cellar/r/3.0.1: 1565 files, 54M, built in 9.2 minutes
==> Downloading http://cran.r-project.org/src/base/R-3/R-3.0.1.tar.gz
Already downloaded: /Library/Caches/Homebrew/r-3.0.1.tar.gz
tar xf /Library/Caches/Homebrew/r-3.0.1.tar.gz
==> Using Homebrew-provided fortran compiler.
This may be changed by setting the FC environment variable.
==> ./configure --prefix=/usr/local/Cellar/r/3.0.1 --with-aqua --enable-R-framework --with-lapack
./configure --prefix=/usr/local/Cellar/r/3.0.1 --with-aqua --enable-R-framework --with-lapack
checking build system type... x86_64-apple-darwin12.3.0
checking host system type... x86_64-apple-darwin12.3.0
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
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checking for gcc... cc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking how to run the C preprocessor... cc -E
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defining F77 to be /usr/bin/gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether /usr/bin/gfortran accepts -g... yes
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c++
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checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
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checking whether the c++ linker (/usr/bin/ld) supports shared libraries... yes
checking for c++ option to produce PIC... -fno-common -DPIC
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checking whether the c++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
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checking whether to build shared libraries... yes
checking whether to build static libraries... no
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checking if /usr/bin/gfortran supports -c -o file.o... yes
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checking whether the /usr/bin/gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking for sin in -lm... yes
checking for library containing dlopen... none required
checking readline/history.h usability... yes
checking readline/history.h presence... yes
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checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_completion_matches exists and is declared... yes
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checking for library containing opendir... none required
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checking glob.h presence... yes
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checking netdb.h usability... yes
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checking netinet/in.h usability... yes
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checking sys/time.h presence... yes
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checking sys/times.h usability... yes
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checking sys/utsname.h presence... yes
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checking errno.h usability... yes
checking errno.h presence... yes
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checking stdarg.h presence... yes
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checking for string.h... (cached) yes
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checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... no
checking return type of signal handlers... void
checking for uint64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for cc option to accept ISO C99... none needed
checking for cc option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of size_t... 8
checking size of long double... 16
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether cc supports -c -o FILE.lo... yes
checking for cc option to support OpenMP... unsupported
checking how to get verbose linking output from /usr/bin/gfortran... -v
checking for Fortran 77 libraries of /usr/bin/gfortran... -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. -lgfortranbegin -lgfortran
checking how to get verbose linking output from cc... -v
checking for C libraries of cc... -L/usr/local/lib -L/usr/local/opt/readline/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking whether /usr/bin/gfortran appends underscores to external names... yes
checking whether /usr/bin/gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether /usr/bin/gfortran and cc agree on int and double... yes
checking whether /usr/bin/gfortran and cc agree on double complex... yes
checking for /usr/bin/gfortran option to support OpenMP... -fopenmp
checking whether c++ accepts -M for generating dependencies... yes
checking for c++ option to support OpenMP... unsupported
checking whether we can compute ObjC Make dependencies... yes, using cc -MM
checking for ObjC runtime library... -lobjc
checking for ObjC runtime style... next
checking whether cc accepts -fobjc-exceptions... yes
checking for cached Foundation settings... no
checking whether default Foundation framework works... no
checking whether -framework Foundation works... yes
checking for working Foundation implementation... yes
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... no
checking whether linker supports dynamic lookup... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
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checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
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checking whether va_copy exists and is declared... yes
checking for isblank... yes
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checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
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checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... no
checking whether sched_getaffinity exists and is declared... no
checking whether utime exists and is declared... yes
checking for clock_gettime in -lrt... no
checking whether clock_gettime exists and is declared... no
checking whether timespec_get exists and is declared... no
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
checking for mempcpy... no
checking for realpath... yes
checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
checking for isnan... yes
checking whether isfinite is declared... yes
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... no
checking whether putenv("FOO=") can unset an environment variable... no
checking for nl_langinfo and CODESET... yes
checking for mkdtemp... yes
checking for strdup... yes
checking for strncasecmp... yes
checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... yes
checking for working sigaction... yes
checking whether mktime sets errno... no
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether C99 double complex is supported... yes
checking whether cabs exists and is declared... yes
checking whether carg exists and is declared... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking for cblas_cdotu_sub in vecLib framework... -framework vecLib
checking iconv.h usability... yes
checking iconv.h presence... yes
checking for iconv.h... yes
checking for iconv... in libiconv
checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
checking for iconvlist... yes
checking for iconv... yes
checking for iconv declaration...
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking wctype.h usability... yes
checking wctype.h presence... yes
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checking whether mbrtowc exists and is declared... yes
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checking whether iswblank exists and is declared... yes
checking whether wctype exists and is declared... yes
checking whether iswctype exists and is declared... yes
checking for wctrans_t... yes
checking for mbstate_t... yes
checking for ICU... no
checking for ucol_open in -licucore... yes
checking for X... libraries , headers
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking X11/Intrinsic.h usability... yes
checking X11/Intrinsic.h presence... yes
checking for X11/Intrinsic.h... yes
checking for XtToolkitInitialize in -lXt... yes
using X11 ... yes
checking for KeySym... yes
checking X11/Xmu/Atoms.h usability... yes
checking X11/Xmu/Atoms.h presence... yes
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checking for XmuInternAtom in -lXmu... yes
checking whether pkg-config knows about cairo and pango... no
checking whether pkg-config knows about cairo... yes
checking whether cairo is >= 1.2 and works... yes
checking for CFStringGetSystemEncoding in CoreFoundation framework... -framework CoreFoundation
checking for tclConfig.sh... no
checking for tclConfig.sh in library (sub)directories... /usr/local/lib/tclConfig.sh
checking for tkConfig.sh... no
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checking tcl.h usability... yes
checking tcl.h presence... yes
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checking tk.h usability... yes
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checking for tk.h... yes
checking whether compiling/linking Tcl/Tk code works... no
checking for BSD networking... yes
checking if jpeglib version >= 6b... yes
checking for jpeg_destroy_compress in -ljpeg... yes
checking for main in -lz... yes
checking if libpng version >= 1.2.7... yes
checking for png_create_write_struct in -lpng... yes
checking tiffio.h usability... yes
checking tiffio.h presence... yes
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checking for TIFFOpen in -ltiff... yes
checking rpc/types.h usability... yes
checking rpc/types.h presence... yes
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checking for rpc/xdr.h... yes
checking for XDR support... yes
checking whether zlib support needs to be compiled... yes
checking mmap support for zlib... yes
checking whether bzip2 support needs to be compiled... yes
checking for lzma_version_number in -llzma... yes
checking lzma.h usability... yes
checking lzma.h presence... yes
checking for lzma.h... yes
checking if lzma version >= 4.999... yes
checking whether PCRE support needs to be compiled... yes
checking whether leap seconds are treated according to POSIX... yes
checking for inline... inline
checking for sys/time.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for struct stat.st_atim.tv_nsec... no
checking for struct stat.st_atimespec.tv_nsec... yes
checking for setitimer... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking whether KERN_USRSTACK sysctl is supported... yes
checking for lpr... lpr
checking for paperconf... false
checking whether we are using the GNU Fortran compiler... yes
checking whether /usr/bin/gfortran accepts -g... yes
checking whether we are using the GNU Fortran compiler... (cached) yes
checking whether /usr/bin/gfortran accepts -g... (cached) yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/bin/gfortran option to produce PIC... -fno-common
checking if /usr/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/bin/gfortran static flag -static works... no
checking if /usr/bin/gfortran supports -c -o file.o... yes
checking if /usr/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/bin/gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for /usr/bin/gfortran option to support OpenMP... -fopenmp
checking for recommended packages... yes
checking whether NLS is requested... yes
Configuring src/extra/intl directory
checking for a thread-safe mkdir -p... /usr/local/bin/gmkdir -p
checking whether we are using the GNU C Library 2 or newer... no
checking for ranlib... (cached) ranlib
checking for simple visibility declarations... yes
checking for stdint.h... yes
checking for getpagesize... yes
checking for working mmap... yes
checking whether integer division by zero raises SIGFPE... yes
checking for inttypes.h... yes
checking for unsigned long long int... yes
checking for inttypes.h... (cached) yes
checking whether the inttypes.h PRIxNN macros are broken... no
checking whether imported symbols can be declared weak... no
checking for multithread API to use... none
checking argz.h usability... no
checking argz.h presence... no
checking for argz.h... no
checking for inttypes.h... (cached) yes
checking for limits.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for getcwd... yes
checking for getegid... yes
checking for geteuid... yes
checking for getgid... yes
checking for getuid... yes
checking for mempcpy... (cached) no
checking for munmap... yes
checking for stpcpy... yes
checking for strcasecmp... yes
checking for strdup... (cached) yes
checking for strtoul... yes
checking for tsearch... yes
checking for argz_count... no
checking for argz_stringify... no
checking for argz_next... no
checking for __fsetlocking... no
checking whether feof_unlocked is declared... yes
checking whether fgets_unlocked is declared... no
checking for iconv... (cached) yes
checking for iconv declaration... (cached)
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... no
checking for bison... bison
checking version of bison... 2.3, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... no
checking for stdint.h... (cached) yes
checking for SIZE_MAX... yes
checking for stdint.h... (cached) yes
checking for CFPreferencesCopyAppValue... yes
checking for CFLocaleCopyCurrent... yes
checking for ptrdiff_t... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
checking for fwprintf... yes
checking for putenv... (cached) yes
checking for setenv... yes
checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
checking whether _snprintf is declared... no
checking whether _snwprintf is declared... no
checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for shared library run path origin... done
checking for CFPreferencesCopyAppValue... (cached) yes
checking for CFLocaleCopyCurrent... (cached) yes
checking whether included gettext is requested... no
checking for GNU gettext in libc... no
checking for GNU gettext in libintl... no
checking whether to use NLS... yes
checking where the gettext function comes from... included intl directory
Finished configuring src/extra/intl directory
using as R_SHELL for scripts ... /bin/sh
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/manual/Makefile
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config.status: creating etc/Renviron
config.status: creating etc/javaconf
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config.status: creating src/include/config.h
config.status: executing libtool commands
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R is now configured for x86_64-apple-darwin12.3.0
Source directory: .
Installation directory: /usr/local/Cellar/r/3.0.1
C compiler: cc -g -O2
Fortran 77 compiler: /usr/bin/gfortran
C++ compiler: c++ -g -O2
Fortran 90/95 compiler: /usr/bin/gfortran
Obj-C compiler: cc -g -O2 -fobjc-exceptions
Interfaces supported: X11, aqua
External libraries: readline, ICU, lzma
Additional capabilities: PNG, JPEG, TIFF, NLS, cairo
Options enabled: framework, shared BLAS, R profiling
Recommended packages: yes
configure: WARNING: you cannot build PDF versions of the R manuals
configure: WARNING: you cannot build PDF versions of vignettes and help pages
==> make
make
make[1]: Nothing to be done for `R'.
make[1]: Nothing to be done for `R'.
make[2]: Nothing to be done for `R'.
creating src/scripts/R.fe
mkdir ../../bin
mkdir ../../include
mkdir ../../../include/R_ext
making blocksort.d from blocksort.c
/usr/bin/gfortran -fPIC -c blas.f -o blas.o
making adler32.d from adler32.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pcre_chartables.d from pcre_chartables.c
brew: superenv removed: -I/usr/local/include
making compress.d from compress.c
making bzlib.d from bzlib.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pcre_compile.d from pcre_compile.c
making crc32.d from crc32.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making bzcompress.d from bzcompress.c
brew: superenv removed: -I/usr/local/include
making deflate.d from deflate.c
making crctable.d from crctable.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pcre_config.d from pcre_config.c
making infback.d from infback.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pcre_exec.d from pcre_exec.c
brew: superenv removed: -I/usr/local/include
making decompress.d from decompress.c
brew: superenv removed: -I/usr/local/include
making inffast.d from inffast.c
making huffman.d from huffman.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pcre_fullinfo.d from pcre_fullinfo.c
making inflate.d from inflate.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making randtable.d from randtable.c
brew: superenv removed: -I/usr/local/include
making inftrees.d from inftrees.c
making pcre_get.d from pcre_get.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pcre_globals.d from pcre_globals.c
brew: superenv removed: -I/usr/local/include
making trees.d from trees.c
brew: superenv removed: -I/usr/local/include
making pcre_jit_compile.d from pcre_jit_compile.c
brew: superenv removed: -I/usr/local/include
making uncompr.d from uncompr.c
brew: superenv removed: -I/usr/local/include
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c blocksort.c -o blocksort.o
brew: superenv removed: -I/usr/local/include -g -O2
making zutil.d from zutil.c
brew: superenv removed: -I/usr/local/include
making pcre_maketables.d from pcre_maketables.c
brew: superenv removed: -I/usr/local/include
making pcre_newline.d from pcre_newline.c
brew: superenv removed: -I/usr/local/include
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c adler32.c -o adler32.o
brew: superenv removed: -I/usr/local/include -g -O2
making pcre_ord2utf8.d from pcre_ord2utf8.c
brew: superenv removed: -I/usr/local/include
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c compress.c -o compress.o
brew: superenv removed: -I/usr/local/include -g -O2
making pcre_refcount.d from pcre_refcount.c
brew: superenv removed: -I/usr/local/include
making pcre_study.d from pcre_study.c
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c crc32.c -o crc32.o
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include -g -O2
making pcre_tables.d from pcre_tables.c
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bzlib.c -o bzlib.o
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c deflate.c -o deflate.o
brew: superenv removed: -I/usr/local/include -g -O2
making pcre_ucd.d from pcre_ucd.c
brew: superenv removed: -I/usr/local/include
making pcre_valid_utf8.d from pcre_valid_utf8.c
brew: superenv removed: -I/usr/local/include
making pcre_version.d from pcre_version.c
brew: superenv removed: -I/usr/local/include
making pcre_xclass.d from pcre_xclass.c
brew: superenv removed: -I/usr/local/include
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bzcompress.c -o bzcompress.o
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_chartables.c -o pcre_chartables.o
brew: superenv removed: -I/usr/local/include -g -O2brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c infback.c -o infback.o
/usr/bin/gfortran -fPIC -c cmplxblas.f -o cmplxblas.o
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_compile.c -o pcre_compile.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inffast.c -o inffast.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inflate.c -o inflate.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c crctable.c -o crctable.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inftrees.c -o inftrees.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c decompress.c -o decompress.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c trees.c -o trees.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c uncompr.c -o uncompr.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c zutil.c -o zutil.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c huffman.c -o huffman.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libz.a
ar cr libz.a adler32.o compress.o crc32.o deflate.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c randtable.c -o randtable.o
ranlib libz.a
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_config.c -o pcre_config.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libbz2.a
ar cr libbz2.a blocksort.o bzlib.o bzcompress.o crctable.o decompress.o huffman.o randtable.o
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_exec.c -o pcre_exec.o
brew: superenv removed: -I/usr/local/include -g -O2
ranlib libbz2.a
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_fullinfo.c -o pcre_fullinfo.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_get.c -o pcre_get.o
brew: superenv removed: -I/usr/local/include -g -O2
making bindtextdom.d from bindtextdom.c
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o libRblas.dylib blas.o cmplxblas.o -install_name libRblas.dylib -headerpad_max_install_names -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran # xerbla.o
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -L/usr/local/lib
making regcomp.d from regcomp.c
brew: superenv removed: -I/usr/local/include
making regerror.d from regerror.c
brew: superenv removed: -I/usr/local/include
making dcgettext.d from dcgettext.c
making regexec.d from regexec.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making tre-ast.d from tre-ast.c
brew: superenv removed: -I/usr/local/include
making dgettext.d from dgettext.c
brew: superenv removed: -I/usr/local/include
making tre-compile.d from tre-compile.c
making gettext.d from gettext.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making finddomain.d from finddomain.c
making tre-match-approx.d from tre-match-approx.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making loadmsgcat.d from loadmsgcat.c
brew: superenv removed: -I/usr/local/include
making tre-match-backtrack.d from tre-match-backtrack.c
brew: superenv removed: -I/usr/local/include
making textdomain.d from textdomain.c
making tre-match-parallel.d from tre-match-parallel.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making l10nflist.d from l10nflist.c
making tre-mem.d from tre-mem.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making explodename.d from explodename.c
making tre-parse.d from tre-parse.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making tre-stack.d from tre-stack.c
making dcigettext.d from dcigettext.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making xmalloc.d from xmalloc.c
brew: superenv removed: -I/usr/local/include
making dcngettext.d from dcngettext.c
brew: superenv removed: -I/usr/local/include
making dngettext.d from dngettext.c
brew: superenv removed: -I/usr/local/include
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c regcomp.c -o regcomp.o
making ngettext.d from ngettext.c
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include
mkdir /private/tmp/r-0r9Q/R-3.0.1/lib
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c regerror.c -o regerror.o
making plural.d from plural.c
making plural-exp.d from plural-exp.c
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making localcharset.d from localcharset.c
making langprefs.d from langprefs.c
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c regexec.c -o regexec.o
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-ast.c -o tre-ast.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-compile.c -o tre-compile.o
making localename.d from localename.c
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include
making printf.d from printf.c
making osdep.d from osdep.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making intl-compat.d from intl-compat.c
making hash-string.d from hash-string.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making lock.d from lock.c
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-match-approx.c -o tre-match-approx.o
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-match-backtrack.c -o tre-match-backtrack.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c bindtextdom.c -o bindtextdom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dcgettext.c -o dcgettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dgettext.c -o dgettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_globals.c -o pcre_globals.o
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c gettext.c -o gettext.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-match-parallel.c -o tre-match-parallel.o
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_jit_compile.c -o pcre_jit_compile.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c finddomain.c -o finddomain.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c loadmsgcat.c -o loadmsgcat.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-mem.c -o tre-mem.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c textdomain.c -o textdomain.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-parse.c -o tre-parse.o
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c l10nflist.c -o l10nflist.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c explodename.c -o explodename.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dcigettext.c -o dcigettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dcngettext.c -o dcngettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dngettext.c -o dngettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-stack.c -o tre-stack.o
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c ngettext.c -o ngettext.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c plural.c -o plural.o
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c xmalloc.c -o xmalloc.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libtre.a
ar cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c plural-exp.c -o plural-exp.o
ranlib libtre.a
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c langprefs.c -o langprefs.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c localcharset.c -o localcharset.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c localename.c -o localename.o
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_maketables.c -o pcre_maketables.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c printf.c -o printf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_newline.c -o pcre_newline.o
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c osdep.c -o osdep.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c intl-compat.c -o intl-compat.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_ord2utf8.c -o pcre_ord2utf8.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c hash-string.c -o hash-string.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_refcount.c -o pcre_refcount.o
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c lock.c -o lock.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libintl.a
ar cr libintl.a bindtextdom.o dcgettext.o dgettext.o gettext.o finddomain.o loadmsgcat.o textdomain.o l10nflist.o explodename.o dcigettext.o dcngettext.o dngettext.o ngettext.o plural.o plural-exp.o langprefs.o localcharset.o localename.o printf.o osdep.o intl-compat.o hash-string.o lock.o
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_study.c -o pcre_study.o
/usr/bin/ranlib: file: libintl.a(printf.o) has no symbols
/usr/bin/ranlib: file: libintl.a(osdep.o) has no symbols
/usr/bin/ranlib: file: libintl.a(lock.o) has no symbols
ranlib libintl.a
ranlib: file: libintl.a(printf.o) has no symbols
ranlib: file: libintl.a(osdep.o) has no symbols
ranlib: file: libintl.a(lock.o) has no symbols
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_tables.c -o pcre_tables.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_ucd.c -o pcre_ucd.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_valid_utf8.c -o pcre_valid_utf8.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_version.c -o pcre_version.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_xclass.c -o pcre_xclass.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libpcre.a
ar cr libpcre.a pcre_chartables.o pcre_compile.o pcre_config.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o
ranlib libpcre.a
making integrate.d from integrate.c
making maxcol.d from maxcol.c
making interv.d from interv.c
making optim.d from optim.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making uncmin.d from uncmin.c
making pretty.d from pretty.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c integrate.c -o integrate.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c interv.c -o interv.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c maxcol.c -o maxcol.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c optim.c -o optim.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pretty.c -o pretty.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c uncmin.c -o uncmin.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
/usr/bin/gfortran -fPIC -c dchdc.f -o dchdc.o
/usr/bin/gfortran -fPIC -c dpbfa.f -o dpbfa.o
/usr/bin/gfortran -fPIC -c dpbsl.f -o dpbsl.o
/usr/bin/gfortran -fPIC -c dpoco.f -o dpoco.o
/usr/bin/gfortran -fPIC -c dpodi.f -o dpodi.o
/usr/bin/gfortran -fPIC -c dpofa.f -o dpofa.o
/usr/bin/gfortran -fPIC -c dposl.f -o dposl.o
/usr/bin/gfortran -fPIC -c dqrdc.f -o dqrdc.o
/usr/bin/gfortran -fPIC -c dqrdc2.f -o dqrdc2.o
/usr/bin/gfortran -fPIC -c dqrls.f -o dqrls.o
/usr/bin/gfortran -fPIC -c dqrsl.f -o dqrsl.o
/usr/bin/gfortran -fPIC -c dqrutl.f -o dqrutl.o
/usr/bin/gfortran -fPIC -c dsvdc.f -o dsvdc.o
/usr/bin/gfortran -fPIC -c dtrco.f -o dtrco.o
/usr/bin/gfortran -fPIC -c dtrsl.f -o dtrsl.o
rm -f libappl.a
ar cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o
ranlib libappl.a
making d1mach.d from d1mach.c
making mlutils.d from mlutils.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making fprec.d from fprec.c
making fmin2.d from fmin2.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making sign.d from sign.c
making imax2.d from imax2.c
making fsign.d from fsign.c
making imin2.d from imin2.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making log1p.d from log1p.c
making chebyshev.d from chebyshev.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making stirlerr.d from stirlerr.c
making gammalims.d from gammalims.c
making bd0.d from bd0.c
making gamma.d from gamma.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making gamma_cody.d from gamma_cody.c
making lgamma.d from lgamma.c
making beta.d from beta.c
making lbeta.d from lbeta.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making polygamma.d from polygamma.c
making bessel_i.d from bessel_i.c
brew: superenv removed: -I/usr/local/include
making bessel_j.d from bessel_j.c
brew: superenv removed: -I/usr/local/include
making bessel_k.d from bessel_k.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making bessel_y.d from bessel_y.c
making snorm.d from snorm.c
making choose.d from choose.c
making sexp.d from sexp.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
brew: superenv removed: -I/usr/local/include
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
brew: superenv removed: -I/usr/local/include
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dunif.d from dunif.c
brew: superenv removed: -I/usr/local/include
making punif.d from punif.c
brew: superenv removed: -I/usr/local/include
making qunif.d from qunif.c
making runif.d from runif.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dnorm.d from dnorm.c
brew: superenv removed: -I/usr/local/include
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making rnorm.d from rnorm.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
brew: superenv removed: -I/usr/local/include
making rlnorm.d from rlnorm.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dnf.d from dnf.c
making dt.d from dt.c
making qt.d from qt.c
making pt.d from pt.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/includebrew: superenv removed: -I/usr/local/include
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
brew: superenv removed: -I/usr/local/include
making rnchisq.d from rnchisq.c
brew: superenv removed: -I/usr/local/include
making dbinom.d from dbinom.c
brew: superenv removed: -I/usr/local/include
making pbinom.d from pbinom.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pexp.d from pexp.c
making qexp.d from qexp.c
brew: superenv removed: -I/usr/local/include
making rexp.d from rexp.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making rgeom.d from rgeom.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making rhyper.d from rhyper.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making rnbinom.d from rnbinom.c
brew: superenv removed: -I/usr/local/include
making dpois.d from dpois.c
making ppois.d from ppois.c
brew: superenv removed: -I/usr/local/include
making qpois.d from qpois.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making rpois.d from rpois.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making qlogis.d from qlogis.c
making plogis.d from plogis.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
brew: superenv removed: -I/usr/local/include
making ptukey.d from ptukey.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c mlutils.c -o mlutils.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c d1mach.c -o d1mach.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c i1mach.c -o i1mach.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fmax2.c -o fmax2.o
brew: superenv removed: -I/usr/local/include -g -O2brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fmin2.c -o fmin2.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fprec.c -o fprec.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fround.c -o fround.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ftrunc.c -o ftrunc.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sign.c -o sign.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fsign.c -o fsign.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c imax2.c -o imax2.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c imin2.c -o imin2.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c chebyshev.c -o chebyshev.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c log1p.c -o log1p.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c expm1.c -o expm1.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lgammacor.c -o lgammacor.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gammalims.c -o gammalims.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c stirlerr.c -o stirlerr.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bd0.c -o bd0.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gamma.c -o gamma.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lgamma.c -o lgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gamma_cody.c -o gamma_cody.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c beta.c -o beta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lbeta.c -o lbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c polygamma.c -o polygamma.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bessel_i.c -o bessel_i.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bessel_j.c -o bessel_j.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bessel_k.c -o bessel_k.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bessel_y.c -o bessel_y.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c choose.c -o choose.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c snorm.c -o snorm.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sexp.c -o sexp.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dgamma.c -o dgamma.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pgamma.c -o pgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qgamma.c -o qgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rgamma.c -o rgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dbeta.c -o dbeta.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pbeta.c -o pbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qbeta.c -o qbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rbeta.c -o rbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dunif.c -o dunif.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c punif.c -o punif.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qunif.c -o qunif.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c runif.c -o runif.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnorm.c -o dnorm.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnorm.c -o pnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnorm.c -o qnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rnorm.c -o rnorm.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dlnorm.c -o dlnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plnorm.c -o plnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qlnorm.c -o qlnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rlnorm.c -o rlnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c df.c -o df.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pf.c -o pf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qf.c -o qf.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rf.c -o rf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnf.c -o dnf.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dt.c -o dt.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pt.c -o pt.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qt.c -o qt.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rt.c -o rt.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnt.c -o dnt.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dchisq.c -o dchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pchisq.c -o pchisq.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qchisq.c -o qchisq.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rchisq.c -o rchisq.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rnchisq.c -o rnchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dbinom.c -o dbinom.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pbinom.c -o pbinom.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qbinom.c -o qbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rbinom.c -o rbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rmultinom.c -o rmultinom.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dcauchy.c -o dcauchy.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcauchy.c -o pcauchy.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qcauchy.c -o qcauchy.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rcauchy.c -o rcauchy.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dexp.c -o dexp.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pexp.c -o pexp.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qexp.c -o qexp.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rexp.c -o rexp.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dgeom.c -o dgeom.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pgeom.c -o pgeom.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qgeom.c -o qgeom.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rgeom.c -o rgeom.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dhyper.c -o dhyper.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c phyper.c -o phyper.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qhyper.c -o qhyper.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rhyper.c -o rhyper.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnbinom.c -o dnbinom.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnbinom.c -o pnbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnbinom.c -o qnbinom.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rnbinom.c -o rnbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dpois.c -o dpois.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ppois.c -o ppois.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qpois.c -o qpois.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rpois.c -o rpois.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dweibull.c -o dweibull.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pweibull.c -o pweibull.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qweibull.c -o qweibull.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rweibull.c -o rweibull.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dlogis.c -o dlogis.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plogis.c -o plogis.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qlogis.c -o qlogis.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rlogis.c -o rlogis.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnchisq.c -o dnchisq.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnchisq.c -o pnchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnchisq.c -o qnchisq.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnbeta.c -o dnbeta.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnbeta.c -o pnbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnbeta.c -o qnbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnf.c -o pnf.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnt.c -o pnt.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnf.c -o qnf.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnt.c -o qnt.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ptukey.c -o ptukey.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qtukey.c -o qtukey.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c toms708.c -o toms708.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c wilcox.c -o wilcox.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c signrank.c -o signrank.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -rf libnmath.a
ar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
/usr/bin/ranlib: file: libnmath.a(mlutils.o) has no symbols
/usr/bin/ranlib: file: libnmath.a(log1p.o) has no symbols
/usr/bin/ranlib: file: libnmath.a(expm1.o) has no symbols
ranlib libnmath.a
ranlib: file: libnmath.a(mlutils.o) has no symbols
ranlib: file: libnmath.a(log1p.o) has no symbols
ranlib: file: libnmath.a(expm1.o) has no symbols
config.status: creating src/unix/Makefile
making Rembedded.d from Rembedded.c
making system.d from system.c
making sys-unix.d from sys-unix.c
making dynload.d from dynload.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
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making sys-std.d from sys-std.c
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making X11.d from X11.c
brew: superenv removed: -I/usr/local/include
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rembedded.c -o Rembedded.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dynload.c -o dynload.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c system.c -o system.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sys-unix.c -o sys-unix.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sys-std.c -o sys-std.o
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c X11.c -o X11.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
rm -rf libunix.a
ar cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o
ranlib libunix.a
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -DR_HOME='"/private/tmp/r-0r9Q/R-3.0.1"' -o Rscript \
./Rscript.c
brew: superenv removed: -I/usr/local/include -g -O2
config.status: creating src/main/Makefile
making CommandLineArgs.d from CommandLineArgs.c
making Rdynload.d from Rdynload.c
making RNG.d from RNG.c
making Renviron.d from Renviron.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
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making agrep.d from agrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
brew: superenv removed: -I/usr/local/include
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making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
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making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
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making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
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making datetime.d from datetime.c
making deparse.d from deparse.c
making debug.d from debug.c
brew: superenv removed: -I/usr/local/include
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making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
brew: superenv removed: -I/usr/local/include
making dstruct.d from dstruct.c
brew: superenv removed: -I/usr/local/include
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making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
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making errors.d from errors.c
making eval.d from eval.c
brew: superenv removed: -I/usr/local/include
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making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
brew: superenv removed: -I/usr/local/include
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making gram-ex.d from gram-ex.c
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making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
brew: superenv removed: -I/usr/local/include
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making inlined.d from inlined.c
brew: superenv removed: -I/usr/local/include
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
brew: superenv removed: -I/usr/local/include
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making lapack.d from lapack.c
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making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
brew: superenv removed: -I/usr/local/include
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making main.d from main.c
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making mapply.d from mapply.c
making match.d from match.c
making memory.d from memory.c
brew: superenv removed: -I/usr/local/include
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making names.d from names.c
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making objects.d from objects.c
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making options.d from options.c
brew: superenv removed: -I/usr/local/include
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making paste.d from paste.c
making platform.d from platform.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
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making print.d from print.c
brew: superenv removed: -I/usr/local/include
making printarray.d from printarray.c
making printvector.d from printvector.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making printutils.d from printutils.c
making qsort.d from qsort.c
making random.d from random.c
making raw.d from raw.c
brew: superenv removed: -I/usr/local/include
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making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
brew: superenv removed: -I/usr/local/include
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making saveload.d from saveload.c
brew: superenv removed: -I/usr/local/include
making scan.d from scan.c
making seq.d from seq.c
brew: superenv removed: -I/usr/local/include
making serialize.d from serialize.c
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making sort.d from sort.c
making source.d from source.c
making split.d from split.c
brew: superenv removed: -I/usr/local/include
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making sprintf.d from sprintf.c
making startup.d from startup.c
brew: superenv removed: -I/usr/local/include
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making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
brew: superenv removed: -I/usr/local/include
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making sysutils.d from sysutils.c
making unique.d from unique.c
making util.d from util.c
brew: superenv removed: -I/usr/local/include
making version.d from version.c
brew: superenv removed: -I/usr/local/include
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making vfonts.d from vfonts.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
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making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c CommandLineArgs.c -o CommandLineArgs.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rdynload.c -o Rdynload.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Renviron.c -o Renviron.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c RNG.c -o RNG.o
brew: superenv removed: -I/usr/local/include -g -O2brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c agrep.c -o agrep.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c apply.c -o apply.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c arithmetic.c -o arithmetic.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c array.c -o array.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c attrib.c -o attrib.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bind.c -o bind.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c builtin.c -o builtin.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c character.c -o character.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c coerce.c -o coerce.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c colors.c -o colors.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c complex.c -o complex.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c connections.c -o connections.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c context.c -o context.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c cum.c -o cum.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dcf.c -o dcf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c datetime.c -o datetime.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c debug.c -o debug.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c deparse.c -o deparse.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c devices.c -o devices.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dotcode.c -o dotcode.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dounzip.c -o dounzip.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dstruct.c -o dstruct.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c duplicate.c -o duplicate.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c edit.c -o edit.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c engine.c -o engine.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c envir.c -o envir.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c errors.c -o errors.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c eval.c -o eval.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c format.c -o format.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gevents.c -o gevents.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gram.c -o gram.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gram-ex.c -o gram-ex.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c graphics.c -o graphics.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c grep.c -o grep.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c identical.c -o identical.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inlined.c -o inlined.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inspect.c -o inspect.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c internet.c -o internet.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c iosupport.c -o iosupport.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lapack.c -o lapack.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c list.c -o list.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c localecharset.c -o localecharset.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c logic.c -o logic.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c main.c -o main.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c mapply.c -o mapply.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c match.c -o match.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c memory.c -o memory.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c names.c -o names.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c objects.c -o objects.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c options.c -o options.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c paste.c -o paste.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c platform.c -o platform.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plot.c -o plot.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plot3d.c -o plot3d.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plotmath.c -o plotmath.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c print.c -o print.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c printarray.c -o printarray.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c printvector.c -o printvector.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c printutils.c -o printutils.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qsort.c -o qsort.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c random.c -o random.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c raw.c -o raw.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c registration.c -o registration.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c relop.c -o relop.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rlocale.c -o rlocale.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c saveload.c -o saveload.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c scan.c -o scan.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c seq.c -o seq.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c serialize.c -o serialize.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sort.c -o sort.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c source.c -o source.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c split.c -o split.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sprintf.c -o sprintf.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c startup.c -o startup.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c subassign.c -o subassign.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c subscript.c -o subscript.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c subset.c -o subset.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c summary.c -o summary.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sysutils.c -o sysutils.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c unique.c -o unique.o
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c util.c -o util.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c version.c -o version.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c vfonts.c -o vfonts.o
brew: superenv removed: -I/usr/local/include -g -O2
/usr/bin/gfortran -fPIC -c xxxpr.f -o xxxpr.o
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -install_name libR.dylib -compatibility_version 3.0.0 -current_version 3.0.1 -headerpad_max_install_names -o libR.dylib CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/tre/libtre.a ../extra/intl/libintl.a -L../../lib -lRblas -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran -Wl,-framework -Wl,CoreFoundation -lreadline -llzma -licucore -lm -liconv
brew: superenv removed: -L/usr/local/lib
mkdir /private/tmp/r-0r9Q/R-3.0.1/bin/exec
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rmain.c -o Rmain.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -L/usr/local/lib -o R.bin Rmain.o -L../../lib -lR -lRblas
brew: superenv removed: -L/usr/local/lib
making devX11.d from devX11.c
making g_alab_her.d from g_alab_her.c
making Lapack.d from Lapack.c
making Rhttpd.d from Rhttpd.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making Rsock.d from Rsock.c
brew: superenv removed: -I/usr/local/include
making g_cntrlify.d from g_cntrlify.c
brew: superenv removed: -I/usr/local/include
making g_fontdb.d from g_fontdb.c
making internet.d from internet.c
brew: superenv removed: -I/usr/local/includebrew: superenv removed: -I/usr/local/include
/usr/bin/gfortran -fPIC -ffloat-store -c dlamch.f -o dlamch.o
making nanoftp.d from nanoftp.c
making g_her_glyph.d from g_her_glyph.c
brew: superenv removed: -I/usr/local/include
brew: superenv removed: -I/usr/local/include
making nanohttp.d from nanohttp.c
brew: superenv removed: -I/usr/local/include
/usr/bin/gfortran -fPIC -c dlapack.f -o dlapack.o
making sock.d from sock.c
brew: superenv removed: -I/usr/local/include
making sockconn.d from sockconn.c
brew: superenv removed: -I/usr/local/include
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c g_alab_her.c -o g_alab_her.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rhttpd.c -o Rhttpd.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c g_cntrlify.c -o g_cntrlify.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c g_fontdb.c -o g_fontdb.o
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rsock.c -o Rsock.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c g_her_glyph.c -o g_her_glyph.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c internet.c -o internet.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c nanoftp.c -o nanoftp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o vfonts.so g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib
making rotated.d from rotated.c
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c nanohttp.c -o nanohttp.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include
making rbitmap.d from rbitmap.c
mkdir /private/tmp/r-0r9Q/R-3.0.1/modules
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include
/usr/bin/gfortran -fPIC -c cmplx.f -o cmplx.o
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sock.c -o sock.o
cc -I. -I../../../src/include -I../../../src/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c devX11.c -o devX11.o
brew: superenv removed: -I/usr/local/include -g -O2
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sockconn.c -o sockconn.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o internet.so Rhttpd.o Rsock.o internet.o nanoftp.o nanohttp.o sock.o sockconn.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib
cc -I. -I../../../src/include -I../../../src/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rotated.c -o rotated.o
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rbitmap.c -o rbitmap.o
cc -I. -I../../../src/include -I../../../src/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dataentry.c -o dataentry.o
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include -g -O2
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o R_X11.so devX11.o rotated.o rbitmap.o -lSM -lICE -L/opt/X11/lib -lz -lcairo -lz -lpixman-1 -lfontconfig -lexpat -lfreetype -lz -lbz2 -lpng15 -lz -lxcb-shm -lX11-xcb -lxcb-render -lXrender -lX11 -lxcb -lXau -lXdmcp -lX11 -lXt -lXmu -ltiff -ljpeg -lpng -lz -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib -L/opt/X11/lib
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o R_de.so dataentry.o -lSM -lICE -L/opt/X11/lib -lz -lcairo -lz -lpixman-1 -lfontconfig -lexpat -lfreetype -lz -lbz2 -lpng15 -lz -lxcb-shm -lX11-xcb -lxcb-render -lXrender -lX11 -lxcb -lXau -lXdmcp -lX11 -lXt -lXmu -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib -L/opt/X11/lib
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o libRlapack.dylib dlamch.o dlapack.o cmplx.o -install_name libRlapack.dylib -compatibility_version 3.0.0 -current_version 3.0.1 -headerpad_max_install_names -L../../../lib -lRblas -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib
brew: superenv removed: -L/usr/local/lib
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Lapack.c -o Lapack.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o lapack.so Lapack.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation -L../../../lib -lRlapack -L../../../lib -lRblas -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran
brew: superenv removed: -L/usr/local/lib
/private/tmp/r-0r9Q/R-3.0.1/lib/libRlapack.dylib is unchanged
mkdir ../../library
building system startup profile
mkdir ../../../library/base
mkdir ../../../library/base/R
building package 'translations'
mkdir ../../../library/translations
building package 'base'
mkdir ../../../library/base/demo
building package 'tools'
mkdir ../../../library/tools
mkdir ../../../library/tools/R
making text.d from text.c
making init.d from init.c
making Rmd5.d from Rmd5.c
making md5.d from md5.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
brew: superenv removed: -I../../../../src/include -I/usr/local/includebrew: superenv removed: -I../../../../src/include -I/usr/local/include
brew: superenv removed: -I../../../../src/include -I/usr/local/include
making signals.d from signals.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
making install.d from install.c
making getfmts.d from getfmts.c
making http.d from http.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
brew: superenv removed: -I../../../../src/include -I/usr/local/include
brew: superenv removed: -I../../../../src/include -I/usr/local/include
making gramLatex.d from gramLatex.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
making gramRd.d from gramRd.c
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c text.c -o text.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c Rmd5.c -o Rmd5.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c md5.c -o md5.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c signals.c -o signals.o
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c install.c -o install.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c getfmts.c -o getfmts.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c http.c -o http.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c gramLatex.c -o gramLatex.o
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fPIC -g -O2 -c gramRd.c -o gramRd.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/tools/libs
dyld: Symbol not found: _rl_sort_completion_matches
Referenced from: /private/tmp/r-0r9Q/R-3.0.1/lib/libR.dylib
Expected in: flat namespace
in /private/tmp/r-0r9Q/R-3.0.1/lib/libR.dylib
/bin/sh: line 1: 55080 Done echo "tools:::.install_package_description('.', '"../../../library/tools"')"
55081 Trace/BPT trap: 5 | R_DEFAULT_PACKAGES=NULL ../../../bin/R --vanilla --slave > /dev/null
make[3]: *** [all] Error 133
make[2]: *** [R] Error 1
make[1]: *** [R] Error 1
make: *** [R] Error 1
==> Configuration
HOMEBREW_VERSION: 0.9.4
HEAD: d68524bfd774b6b2fd91f49d914bf18e3ae7c22f
CPU: quad-core 64-bit sandybridge
OS X: 10.8.3-x86_64
Xcode: 4.6.2
CLT: 4.6.0.0.1.1362189000
X11: 2.7.4 => /opt/X11
==> ENV
HOMEBREW_CC: clang
MAKEFLAGS: -j4
CMAKE_PREFIX_PATH: /usr/local/opt/readline:/usr/local
CMAKE_INCLUDE_PATH: /opt/X11/include/freetype2:/usr/include/libxml2:/opt/X11/include
CMAKE_LIBRARY_PATH: /opt/X11/lib
PKG_CONFIG_PATH: /usr/local/opt/libtiff/lib/pkgconfig
PKG_CONFIG_LIBDIR: /usr/lib/pkgconfig:/usr/local/Library/ENV/pkgconfig/10.8:/opt/X11/lib/pkgconfig:/opt/X11/share/pkgconfig
ACLOCAL_PATH: /usr/local/share/aclocal:/opt/X11/share/aclocal
OBJC: cc
PATH: /usr/local/Library/ENV/4.3:/usr/local/opt/libtiff/bin:/usr/local/opt/jpeg/bin:/usr/local/opt/python/bin:/opt/X11/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/local/bin
Error: r did not build
Logs: /Users/Andres/Library/Logs/Homebrew/r/config.log
This file has been truncated, but you can view the full file.
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by R configure 3.0.1, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --prefix=/usr/local/Cellar/r/3.0.1 --with-aqua --enable-R-framework --with-lapack
## --------- ##
## Platform. ##
## --------- ##
hostname = Montjuic.local
uname -m = x86_64
uname -r = 12.3.0
uname -s = Darwin
uname -v = Darwin Kernel Version 12.3.0: Sun Jan 6 22:37:10 PST 2013; root:xnu-2050.22.13~1/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 12.3.0: Sun Jan 6 22:37:10 PST 2013; root:xnu-2050.22.13~1/RELEASE_X86_64
Kernel configured for up to 4 processors.
2 processors are physically available.
4 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1 2 3
Primary memory available: 4.00 gigabytes
Default processor set: 170 tasks, 1105 threads, 4 processors
Load average: 1.03, Mach factor: 2.96
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /usr/local/Library/ENV/4.3
PATH: /usr/local/opt/libtiff/bin
PATH: /usr/local/opt/jpeg/bin
PATH: /usr/local/opt/python/bin
PATH: /opt/X11/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /usr/local/bin
PATH: /usr/local/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:3635: checking build system type
configure:3649: result: x86_64-apple-darwin12.3.0
configure:3669: checking host system type
configure:3682: result: x86_64-apple-darwin12.3.0
configure:4377: checking for pwd
configure:4395: found /bin/pwd
configure:4408: result: /bin/pwd
configure:4416: checking whether builddir is srcdir
configure:4424: result: yes
configure:4429: checking for working aclocal
configure:4433: result: found
configure:4442: checking for working autoconf
configure:4446: result: found
configure:4455: checking for working automake
configure:4459: result: found
configure:4468: checking for working autoheader
configure:4472: result: found
configure:4485: checking for gawk
configure:4515: result: no
configure:4485: checking for mawk
configure:4515: result: no
configure:4485: checking for nawk
configure:4515: result: no
configure:4485: checking for awk
configure:4501: found /usr/bin/awk
configure:4512: result: awk
configure:4523: checking whether ln -s works
configure:4527: result: yes
configure:4538: checking for bison
configure:4554: found /usr/bin/bison
configure:4565: result: bison -y
configure:4581: checking for ar
configure:4597: found /usr/bin/ar
configure:4608: result: ar
configure:4636: checking for a BSD-compatible install
configure:4704: result: /usr/bin/install -c
configure:4739: checking for sed
configure:4758: found /usr/local/Library/ENV/4.3/sed
configure:4770: result: /usr/local/Library/ENV/4.3/sed
configure:4788: checking for which
configure:4806: found /usr/bin/which
configure:4818: result: /usr/bin/which
configure:4838: checking for less
configure:4856: found /usr/bin/less
configure:4868: result: /usr/bin/less
configure:4891: checking for gtar
configure:4924: result: no
configure:4891: checking for gnutar
configure:4909: found /usr/bin/gnutar
configure:4921: result: /usr/bin/gnutar
configure:4943: checking for tex
configure:4976: result: no
configure:4988: checking for pdftex
configure:5021: result: no
configure:5031: WARNING: you cannot build PDF versions of the R manuals
configure:5038: checking for pdflatex
configure:5071: result: no
configure:5081: WARNING: you cannot build PDF versions of vignettes and help pages
configure:5088: checking for makeindex
configure:5121: result: no
configure:5133: checking for makeinfo
configure:5151: found /usr/bin/makeinfo
configure:5163: result: /usr/bin/makeinfo
configure:5175: checking whether makeinfo version is at least 4.7
configure:5197: result: yes
configure:5204: checking for ginstall-info
configure:5237: result: no
configure:5204: checking for install-info
configure:5222: found /usr/bin/install-info
configure:5234: result: /usr/bin/install-info
configure:5266: checking for texi2dvi
configure:5284: found /usr/bin/texi2dvi
configure:5296: result: /usr/bin/texi2dvi
configure:5316: checking for kpsewhich
configure:5349: result: no
configure:5377: checking for unzip
configure:5395: found /usr/bin/unzip
configure:5407: result: /usr/bin/unzip
configure:5423: checking for zip
configure:5441: found /usr/bin/zip
configure:5453: result: /usr/bin/zip
configure:5469: checking for gzip
configure:5487: found /usr/bin/gzip
configure:5499: result: /usr/bin/gzip
configure:5515: checking for bzip2
configure:5533: found /usr/bin/bzip2
configure:5545: result: /usr/bin/bzip2
configure:5563: checking for firefox
configure:5596: result: no
configure:5563: checking for mozilla
configure:5596: result: no
configure:5563: checking for galeon
configure:5596: result: no
configure:5563: checking for opera
configure:5596: result: no
configure:5563: checking for xdg-open
configure:5596: result: no
configure:5563: checking for kfmclient
configure:5596: result: no
configure:5563: checking for gnome-moz-remote
configure:5596: result: no
configure:5563: checking for open
configure:5581: found /usr/bin/open
configure:5593: result: /usr/bin/open
configure:5610: result: using default browser ... /usr/bin/open
configure:5620: checking for acroread
configure:5653: result: no
configure:5620: checking for acroread4
configure:5653: result: no
configure:5620: checking for xdg-open
configure:5653: result: no
configure:5620: checking for evince
configure:5653: result: no
configure:5620: checking for xpdf
configure:5653: result: no
configure:5620: checking for gv
configure:5653: result: no
configure:5620: checking for gnome-gv
configure:5653: result: no
configure:5620: checking for ggv
configure:5653: result: no
configure:5620: checking for okular
configure:5653: result: no
configure:5620: checking for kpdf
configure:5653: result: no
configure:5620: checking for open
configure:5638: found /usr/bin/open
configure:5650: result: /usr/bin/open
configure:5671: checking for notangle
configure:5702: result: false
configure:5714: checking for pkg-config
configure:5733: found /usr/local/bin/pkg-config
configure:5745: result: /usr/local/bin/pkg-config
configure:5802: checking for gcc
configure:5829: result: cc
configure:6058: checking for C compiler version
configure:6067: cc --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:6078: $? = 0
configure:6067: cc -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
clang: warning: argument unused during compilation: '-isystem /usr/local/include'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include/freetype2'
clang: warning: argument unused during compilation: '-isystem /usr/include/libxml2'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include'
clang: warning: argument unused during compilation: '-I /usr/local/opt/readline/include'
clang: warning: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: warning: argument unused during compilation: '-L/usr/local/lib'
... rest of stderr output deleted ...
configure:6078: $? = 0
configure:6067: cc -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
clang: error: no input files
configure:6078: $? = 1
configure:6067: cc -qversion >&5
clang: error: no input files
configure:6078: $? = 1
configure:6098: checking whether the C compiler works
configure:6120: cc -I/usr/local/include -L/usr/local/lib conftest.c >&5
configure:6124: $? = 0
configure:6172: result: yes
configure:6175: checking for C compiler default output file name
configure:6177: result: a.out
configure:6183: checking for suffix of executables
configure:6190: cc -o conftest -I/usr/local/include -L/usr/local/lib conftest.c >&5
configure:6194: $? = 0
configure:6216: result:
configure:6238: checking whether we are cross compiling
configure:6246: cc -o conftest -I/usr/local/include -L/usr/local/lib conftest.c >&5
configure:6250: $? = 0
configure:6257: ./conftest
configure:6261: $? = 0
configure:6276: result: no
configure:6281: checking for suffix of object files
configure:6303: cc -c -I/usr/local/include conftest.c >&5
configure:6307: $? = 0
configure:6328: result: o
configure:6332: checking whether we are using the GNU C compiler
configure:6351: cc -c -I/usr/local/include conftest.c >&5
configure:6351: $? = 0
configure:6360: result: yes
configure:6369: checking whether cc accepts -g
configure:6389: cc -c -g -I/usr/local/include conftest.c >&5
configure:6389: $? = 0
configure:6430: result: yes
configure:6447: checking for cc option to accept ISO C89
configure:6510: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:6510: $? = 0
configure:6523: result: none needed
configure:6550: checking how to run the C preprocessor
configure:6581: cc -E -I/usr/local/include conftest.c
configure:6581: $? = 0
configure:6595: cc -E -I/usr/local/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6595: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6620: result: cc -E
configure:6640: cc -E -I/usr/local/include conftest.c
configure:6640: $? = 0
configure:6654: cc -E -I/usr/local/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6654: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6683: checking for grep that handles long lines and -e
configure:6741: result: /usr/bin/grep
configure:6746: checking for egrep
configure:6808: result: /usr/bin/grep -E
configure:6814: checking whether cc needs -traditional
conftest.c:17:10: fatal error: 'termio.h' file not found
#include <termio.h>
^
1 error generated.
configure:6848: result: no
configure:6860: checking how to run the C preprocessor
configure:6930: result: cc -E
configure:6950: cc -E -I/usr/local/include conftest.c
configure:6950: $? = 0
configure:6964: cc -E -I/usr/local/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6964: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7036: result: defining F77 to be /usr/bin/gfortran
configure:7208: checking for Fortran 77 compiler version
configure:7217: /usr/bin/gfortran --version >&5
GNU Fortran (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:7228: $? = 0
configure:7217: /usr/bin/gfortran -v >&5
Using built-in specs.
Target: i686-apple-darwin11
Configured with: /Volumes/Media/Builds/gcc-5666.3/build/obj/src/configure --disable-checking --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++,fortran --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:7228: $? = 0
configure:7217: /usr/bin/gfortran -V >&5
gfortran-4.2: argument to `-V' is missing
configure:7228: $? = 1
configure:7217: /usr/bin/gfortran -qversion >&5
i686-apple-darwin11-gfortran-4.2.1: no input files
configure:7228: $? = 1
configure:7237: checking whether we are using the GNU Fortran 77 compiler
configure:7250: /usr/bin/gfortran -c conftest.F >&5
configure:7250: $? = 0
configure:7259: result: yes
configure:7265: checking whether /usr/bin/gfortran accepts -g
configure:7276: /usr/bin/gfortran -c -g conftest.f >&5
configure:7276: $? = 0
configure:7284: result: yes
configure:7429: checking for C++ compiler version
configure:7438: c++ --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:7449: $? = 0
configure:7438: c++ -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
clang: warning: argument unused during compilation: '-isystem /usr/local/include'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include/freetype2'
clang: warning: argument unused during compilation: '-isystem /usr/include/libxml2'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include'
clang: warning: argument unused during compilation: '-I /usr/local/opt/readline/include'
clang: warning: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: warning: argument unused during compilation: '-L/usr/local/lib'
... rest of stderr output deleted ...
configure:7449: $? = 0
configure:7438: c++ -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
clang: error: no input files
configure:7449: $? = 1
configure:7438: c++ -qversion >&5
clang: error: no input files
configure:7449: $? = 1
configure:7453: checking whether we are using the GNU C++ compiler
configure:7472: c++ -c -I/usr/local/include conftest.cpp >&5
configure:7472: $? = 0
configure:7481: result: yes
configure:7490: checking whether c++ accepts -g
configure:7510: c++ -c -g -I/usr/local/include conftest.cpp >&5
configure:7510: $? = 0
configure:7551: result: yes
configure:7579: checking how to run the C++ preprocessor
configure:7606: c++ -E -I/usr/local/include conftest.cpp
configure:7606: $? = 0
configure:7620: c++ -E -I/usr/local/include conftest.cpp
conftest.cpp:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7620: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7645: result: c++ -E
configure:7665: c++ -E -I/usr/local/include conftest.cpp
configure:7665: $? = 0
configure:7679: c++ -E -I/usr/local/include conftest.cpp
conftest.cpp:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7679: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7713: checking whether __attribute__((visibility())) is supported
configure:7724: cc -Werror -S conftest.c -o conftest.s 1>&5
clang: error: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: error: argument unused during compilation: '-L/usr/local/lib'
clang: error: argument unused during compilation: '-L/opt/X11/lib'
configure:7727: $? = 1
configure:7736: result: no
configure:7747: checking whether cc accepts -fvisibility
configure:7763: cc -c -g -O2 -fvisibility=hidden -I/usr/local/include conftest.c >&5
configure:7763: $? = 0
configure:7770: result: yes
configure:7795: checking whether /usr/bin/gfortran accepts -fvisibility
configure:7805: /usr/bin/gfortran -c -fvisibility=hidden conftest.f >&5
configure:7805: $? = 0
configure:7812: result: yes
configure:7835: checking for ANSI C header files
configure:7855: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7855: $? = 0
configure:7928: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c >&5
configure:7928: $? = 0
configure:7928: ./conftest
configure:7928: $? = 0
configure:7939: result: yes
configure:7952: checking for sys/types.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for sys/stat.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for stdlib.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for string.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for memory.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for strings.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for inttypes.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for stdint.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for unistd.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7965: checking minix/config.h usability
configure:7965: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:60:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:7965: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <minix/config.h>
configure:7965: result: no
configure:7965: checking minix/config.h presence
configure:7965: cc -E -I/usr/local/include conftest.c
conftest.c:27:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:7965: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <minix/config.h>
configure:7965: result: no
configure:7965: checking for minix/config.h
configure:7965: result: no
configure:7986: checking whether it is safe to define __EXTENSIONS__
configure:8004: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:8004: $? = 0
configure:8011: result: yes
configure:8133: checking for Objective C compiler version
configure:8142: cc --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:8153: $? = 0
configure:8142: cc -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
clang: warning: argument unused during compilation: '-isystem /usr/local/include'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include/freetype2'
clang: warning: argument unused during compilation: '-isystem /usr/include/libxml2'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include'
clang: warning: argument unused during compilation: '-I /usr/local/opt/readline/include'
clang: warning: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: warning: argument unused during compilation: '-L/usr/local/lib'
... rest of stderr output deleted ...
configure:8153: $? = 0
configure:8142: cc -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
clang: error: no input files
configure:8153: $? = 1
configure:8142: cc -qversion >&5
clang: error: no input files
configure:8153: $? = 1
configure:8157: checking whether we are using the GNU Objective C compiler
configure:8176: cc -c -I/usr/local/include conftest.m >&5
configure:8176: $? = 0
configure:8185: result: yes
configure:8194: checking whether cc accepts -g
configure:8214: cc -c -g -I/usr/local/include conftest.m >&5
configure:8214: $? = 0
configure:8255: result: yes
configure:8314: checking for Objective C++ compiler
configure:8320: result: trying some possibilities
configure:8323: checking whether c++ can compile ObjC++
running: c++ -c conftest.mm -I/usr/local/include
configure:8351: result: yes
configure:8455: result: c++
configure:8524: checking for a sed that does not truncate output
configure:8588: result: /usr/local/Library/ENV/4.3/sed
configure:8606: checking for fgrep
configure:8668: result: /usr/bin/grep -F
configure:8696: checking for ld used by cc
configure:8763: result: /usr/bin/ld
configure:8770: checking if the linker (/usr/bin/ld) is GNU ld
configure:8785: result: no
configure:8797: checking for BSD- or MS-compatible name lister (nm)
configure:8846: result: /usr/bin/nm
configure:8964: checking the name lister (/usr/bin/nm) interface
configure:8971: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:8974: /usr/bin/nm "conftest.o"
configure:8977: output
0000000000000204 S _some_variable
configure:8984: result: BSD nm
configure:8988: checking the maximum length of command line arguments
configure:9108: result: 196608
configure:9125: checking whether the shell understands some XSI constructs
configure:9135: result: yes
configure:9139: checking whether the shell understands "+="
configure:9145: result: yes
configure:9180: checking for /usr/bin/ld option to reload object files
configure:9187: result: -r
configure:9256: checking for objdump
configure:9286: result: no
configure:9315: checking how to recognize dependent libraries
configure:9511: result: pass_all
configure:9676: checking for strip
configure:9692: found /usr/bin/strip
configure:9703: result: strip
configure:9775: checking for ranlib
configure:9791: found /usr/bin/ranlib
configure:9802: result: ranlib
configure:9892: checking command to parse /usr/bin/nm output from cc object
configure:10010: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:10013: $? = 0
configure:10017: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:10020: $? = 0
cannot find nm_test_var in conftest.nm
configure:10010: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:10013: $? = 0
configure:10017: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' \> conftest.nm
configure:10020: $? = 0
configure:10074: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c conftstm.o >&5
configure:10077: $? = 0
configure:10115: result: ok
configure:10186: checking for dsymutil
configure:10202: found /usr/bin/dsymutil
configure:10213: result: dsymutil
configure:10278: checking for nmedit
configure:10294: found /usr/bin/nmedit
configure:10305: result: nmedit
configure:10370: checking for lipo
configure:10386: found /usr/bin/lipo
configure:10397: result: lipo
configure:10462: checking for otool
configure:10478: found /usr/bin/otool
configure:10489: result: otool
configure:10554: checking for otool64
configure:10584: result: no
configure:10629: checking for -single_module linker flag
cc -g -O2 -L/usr/local/lib -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:10656: result: yes
configure:10658: checking for -exported_symbols_list linker flag
configure:10678: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
configure:10678: $? = 0
configure:10688: result: yes
configure:10727: checking for dlfcn.h
configure:10727: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:10727: $? = 0
configure:10727: result: yes
configure:10852: checking for C++ compiler version
configure:10861: c++ --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:10872: $? = 0
configure:10861: c++ -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
clang: warning: argument unused during compilation: '-isystem /usr/local/include'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include/freetype2'
clang: warning: argument unused during compilation: '-isystem /usr/include/libxml2'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include'
clang: warning: argument unused during compilation: '-I /usr/local/opt/readline/include'
clang: warning: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: warning: argument unused during compilation: '-L/usr/local/lib'
... rest of stderr output deleted ...
configure:10872: $? = 0
configure:10861: c++ -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
clang: error: no input files
configure:10872: $? = 1
configure:10861: c++ -qversion >&5
clang: error: no input files
configure:10872: $? = 1
configure:10876: checking whether we are using the GNU C++ compiler
configure:10904: result: yes
configure:10913: checking whether c++ accepts -g
configure:10974: result: yes
configure:11005: checking how to run the C++ preprocessor
configure:11071: result: c++ -E
configure:11091: c++ -E -I/usr/local/include conftest.cpp
configure:11091: $? = 0
configure:11105: c++ -E -I/usr/local/include conftest.cpp
conftest.cpp:33:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:11105: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:11246: checking for Fortran 77 compiler version
configure:11255: /usr/bin/gfortran --version >&5
GNU Fortran (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:11266: $? = 0
configure:11255: /usr/bin/gfortran -v >&5
Using built-in specs.
Target: i686-apple-darwin11
Configured with: /Volumes/Media/Builds/gcc-5666.3/build/obj/src/configure --disable-checking --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++,fortran --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:11266: $? = 0
configure:11255: /usr/bin/gfortran -V >&5
gfortran-4.2: argument to `-V' is missing
configure:11266: $? = 1
configure:11255: /usr/bin/gfortran -qversion >&5
i686-apple-darwin11-gfortran-4.2.1: no input files
configure:11266: $? = 1
configure:11275: checking whether we are using the GNU Fortran 77 compiler
configure:11297: result: yes
configure:11303: checking whether /usr/bin/gfortran accepts -g
configure:11322: result: yes
configure:11500: checking for objdir
configure:11515: result: .libs
configure:11811: checking if cc supports -fno-rtti -fno-exceptions
configure:11829: cc -c -g -O2 -I/usr/local/include -fno-rtti -fno-exceptions conftest.c >&5
configure:11833: $? = 0
configure:11846: result: yes
configure:11866: checking for cc option to produce PIC
configure:12138: result: -fno-common -DPIC
configure:12150: checking if cc PIC flag -fno-common -DPIC works
configure:12168: cc -c -g -O2 -I/usr/local/include -fno-common -DPIC -DPIC conftest.c >&5
configure:12172: $? = 0
configure:12185: result: yes
configure:12209: checking if cc static flag -static works
configure:12237: result: no
configure:12252: checking if cc supports -c -o file.o
configure:12273: cc -c -g -O2 -I/usr/local/include -o out/conftest2.o conftest.c >&5
configure:12277: $? = 0
configure:12299: result: yes
configure:12307: checking if cc supports -c -o file.o
configure:12354: result: yes
configure:12387: checking whether the cc linker (/usr/bin/ld) supports shared libraries
configure:13373: result: yes
configure:13612: checking dynamic linker characteristics
configure:14263: result: darwin12.3.0 dyld
configure:14365: checking how to hardcode library paths into programs
configure:14390: result: immediate
configure:14910: checking whether stripping libraries is possible
configure:14924: result: yes
configure:14950: checking if libtool supports shared libraries
configure:14952: result: yes
configure:14955: checking whether to build shared libraries
configure:14976: result: yes
configure:14979: checking whether to build static libraries
configure:14983: result: no
configure:15126: checking for ld used by c++
configure:15193: result: /usr/bin/ld
configure:15200: checking if the linker (/usr/bin/ld) is GNU ld
configure:15215: result: no
configure:15270: checking whether the c++ linker (/usr/bin/ld) supports shared libraries
configure:16183: result: yes
configure:16211: c++ -c -g -O2 -I/usr/local/include conftest.cpp >&5
configure:16214: $? = 0
configure:16396: checking for c++ option to produce PIC
configure:16713: result: -fno-common -DPIC
configure:16722: checking if c++ PIC flag -fno-common -DPIC works
configure:16740: c++ -c -g -O2 -I/usr/local/include -fno-common -DPIC -DPIC conftest.cpp >&5
configure:16744: $? = 0
configure:16757: result: yes
configure:16778: checking if c++ static flag -static works
configure:16806: result: no
configure:16818: checking if c++ supports -c -o file.o
configure:16839: c++ -c -g -O2 -I/usr/local/include -o out/conftest2.o conftest.cpp >&5
configure:16843: $? = 0
configure:16865: result: yes
configure:16870: checking if c++ supports -c -o file.o
configure:16917: result: yes
configure:16947: checking whether the c++ linker (/usr/bin/ld) supports shared libraries
configure:16973: result: yes
configure:17110: checking dynamic linker characteristics
configure:17709: result: darwin12.3.0 dyld
configure:17760: checking how to hardcode library paths into programs
configure:17785: result: immediate
configure:17926: checking if libtool supports shared libraries
configure:17928: result: yes
configure:17931: checking whether to build shared libraries
configure:17951: result: yes
configure:17954: checking whether to build static libraries
configure:17958: result: no
configure:17972: checking for /usr/bin/gfortran option to produce PIC
configure:18244: result: -fno-common
configure:18253: checking if /usr/bin/gfortran PIC flag -fno-common works
configure:18271: /usr/bin/gfortran -c -fno-common conftest.f >&5
configure:18275: $? = 0
configure:18288: result: yes
configure:18309: checking if /usr/bin/gfortran static flag -static works
configure:18337: result: no
configure:18349: checking if /usr/bin/gfortran supports -c -o file.o
configure:18370: /usr/bin/gfortran -c -o out/conftest2.o conftest.f >&5
configure:18374: $? = 0
configure:18396: result: yes
configure:18401: checking if /usr/bin/gfortran supports -c -o file.o
configure:18448: result: yes
configure:18478: checking whether the /usr/bin/gfortran linker (/usr/bin/ld) supports shared libraries
configure:19451: result: yes
configure:19588: checking dynamic linker characteristics
configure:20181: result: darwin12.3.0 dyld
configure:20232: checking how to hardcode library paths into programs
configure:20257: result: immediate
configure:20561: checking for sin in -lm
configure:20586: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:41:6: warning: incompatible redeclaration of library function 'sin'
char sin ();
^
conftest.c:41:6: note: 'sin' is a builtin with type 'double (double)'
1 warning generated.
configure:20586: $? = 0
configure:20595: result: yes
configure:20609: checking for library containing dlopen
configure:20640: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:20640: $? = 0
configure:20657: result: none required
configure:20770: checking readline/history.h usability
configure:20770: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:20770: $? = 0
configure:20770: result: yes
configure:20770: checking readline/history.h presence
configure:20770: cc -E -I/usr/local/include conftest.c
configure:20770: $? = 0
configure:20770: result: yes
configure:20770: checking for readline/history.h
configure:20770: result: yes
configure:20770: checking readline/readline.h usability
configure:20770: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:20770: $? = 0
configure:20770: result: yes
configure:20770: checking readline/readline.h presence
configure:20770: cc -E -I/usr/local/include conftest.c
configure:20770: $? = 0
configure:20770: result: yes
configure:20770: checking for readline/readline.h
configure:20770: result: yes
configure:20784: checking for rl_callback_read_char in -lreadline
configure:20809: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lreadline >&5
configure:20809: $? = 0
configure:20818: result: yes
configure:21002: checking for history_truncate_file
configure:21002: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lreadline >&5
configure:21002: $? = 0
configure:21002: result: yes
configure:21017: checking whether rl_completion_matches exists and is declared
configure:21039: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lreadline >&5
configure:21039: $? = 0
configure:21048: result: yes
configure:21066: checking for ANSI C header files
configure:21170: result: yes
configure:21181: checking for dirent.h that defines DIR
configure:21200: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21200: $? = 0
configure:21208: result: yes
configure:21221: checking for library containing opendir
configure:21252: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:21252: $? = 0
configure:21269: result: none required
configure:21340: checking for sys/wait.h that is POSIX.1 compatible
configure:21366: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21366: $? = 0
configure:21373: result: yes
configure:21400: checking arpa/inet.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking arpa/inet.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for arpa/inet.h
configure:21400: result: yes
configure:21400: checking dl.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:77:10: fatal error: 'dl.h' file not found
#include <dl.h>
^
1 error generated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <dl.h>
configure:21400: result: no
configure:21400: checking dl.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
conftest.c:44:10: fatal error: 'dl.h' file not found
#include <dl.h>
^
1 error generated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <dl.h>
configure:21400: result: no
configure:21400: checking for dl.h
configure:21400: result: no
configure:21400: checking for dlfcn.h
configure:21400: result: yes
configure:21400: checking elf.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:78:10: fatal error: 'elf.h' file not found
#include <elf.h>
^
1 error generated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <elf.h>
configure:21400: result: no
configure:21400: checking elf.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
conftest.c:45:10: fatal error: 'elf.h' file not found
#include <elf.h>
^
1 error generated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <elf.h>
configure:21400: result: no
configure:21400: checking for elf.h
configure:21400: result: no
configure:21400: checking fcntl.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking fcntl.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for fcntl.h
configure:21400: result: yes
configure:21400: checking floatingpoint.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:79:10: fatal error: 'floatingpoint.h' file not found
#include <floatingpoint.h>
^
1 error generated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <floatingpoint.h>
configure:21400: result: no
configure:21400: checking floatingpoint.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
conftest.c:46:10: fatal error: 'floatingpoint.h' file not found
#include <floatingpoint.h>
^
1 error generated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <floatingpoint.h>
configure:21400: result: no
configure:21400: checking for floatingpoint.h
configure:21400: result: no
configure:21400: checking fpu_control.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:79:10: fatal error: 'fpu_control.h' file not found
#include <fpu_control.h>
^
1 error generated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <fpu_control.h>
configure:21400: result: no
configure:21400: checking fpu_control.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
conftest.c:46:10: fatal error: 'fpu_control.h' file not found
#include <fpu_control.h>
^
1 error generated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <fpu_control.h>
configure:21400: result: no
configure:21400: checking for fpu_control.h
configure:21400: result: no
configure:21400: checking glob.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking glob.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for glob.h
configure:21400: result: yes
configure:21400: checking grp.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking grp.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for grp.h
configure:21400: result: yes
configure:21400: checking netdb.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking netdb.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for netdb.h
configure:21400: result: yes
configure:21400: checking netinet/in.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking netinet/in.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for netinet/in.h
configure:21400: result: yes
configure:21400: checking pwd.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking pwd.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for pwd.h
configure:21400: result: yes
configure:21400: checking sched.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sched.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sched.h
configure:21400: result: yes
configure:21400: checking for strings.h
configure:21400: result: yes
configure:21400: checking sys/param.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/param.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/param.h
configure:21400: result: yes
configure:21400: checking sys/resource.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/resource.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/resource.h
configure:21400: result: yes
configure:21400: checking sys/select.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/select.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/select.h
configure:21400: result: yes
configure:21400: checking sys/socket.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/socket.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/socket.h
configure:21400: result: yes
configure:21400: checking for sys/stat.h
configure:21400: result: yes
configure:21400: checking sys/time.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/time.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/time.h
configure:21400: result: yes
configure:21400: checking sys/times.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/times.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/times.h
configure:21400: result: yes
configure:21400: checking sys/utsname.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/utsname.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/utsname.h
configure:21400: result: yes
configure:21400: checking for unistd.h
configure:21400: result: yes
configure:21400: checking utime.h usability
configure:21400: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking utime.h presence
configure:21400: cc -E -I/usr/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for utime.h
configure:21400: result: yes
configure:21418: checking errno.h usability
configure:21418: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking errno.h presence
configure:21418: cc -E -I/usr/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for errno.h
configure:21418: result: yes
configure:21418: checking for inttypes.h
configure:21418: result: yes
configure:21418: checking limits.h usability
configure:21418: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking limits.h presence
configure:21418: cc -E -I/usr/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for limits.h
configure:21418: result: yes
configure:21418: checking locale.h usability
configure:21418: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking locale.h presence
configure:21418: cc -E -I/usr/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for locale.h
configure:21418: result: yes
configure:21418: checking stdarg.h usability
configure:21418: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking stdarg.h presence
configure:21418: cc -E -I/usr/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for stdarg.h
configure:21418: result: yes
configure:21418: checking stdbool.h usability
configure:21418: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking stdbool.h presence
configure:21418: cc -E -I/usr/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for stdbool.h
configure:21418: result: yes
configure:21418: checking for stdint.h
configure:21418: result: yes
configure:21418: checking for string.h
configure:21418: result: yes
configure:21431: checking whether setjmp.h is POSIX.1 compatible
configure:21449: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21449: $? = 0
configure:21456: result: yes
configure:21458: checking whether sigsetjmp is declared
configure:21458: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21458: $? = 0
configure:21458: result: yes
configure:21469: checking whether siglongjmp is declared
configure:21469: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21469: $? = 0
configure:21469: result: yes
configure:21493: checking for GNU C library with version >= 2
configure:21516: result: no
configure:21527: checking return type of signal handlers
configure:21545: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:80:8: error: indirection requires pointer operand ('void' invalid)
return *(signal (0, 0)) (0) == 1;
^~~~~~~~~~~~~~~~~~~~
1 error generated.
configure:21545: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <signal.h>
|
| int
| main ()
| {
| return *(signal (0, 0)) (0) == 1;
| ;
| return 0;
| }
configure:21552: result: void
configure:21561: checking for uint64_t
configure:21561: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21561: $? = 0
configure:21561: result: yes
configure:21575: checking for pid_t
configure:21575: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21575: $? = 0
configure:21575: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:111:20: error: expected expression
if (sizeof ((pid_t)))
^
1 error generated.
configure:21575: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((pid_t)))
| return 0;
| ;
| return 0;
| }
configure:21575: result: yes
configure:21586: checking for size_t
configure:21586: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21586: $? = 0
configure:21586: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:111:21: error: expected expression
if (sizeof ((size_t)))
^
1 error generated.
configure:21586: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| return 0;
| ;
| return 0;
| }
configure:21586: result: yes
configure:21597: checking whether SIZE_MAX is declared
configure:21630: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:21630: $? = 0
configure:21630: ./conftest
configure:21630: $? = 0
configure:21640: result: yes
configure:21648: checking for blkcnt_t
configure:21648: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21648: $? = 0
configure:21648: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:112:23: error: expected expression
if (sizeof ((blkcnt_t)))
^
1 error generated.
configure:21648: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((blkcnt_t)))
| return 0;
| ;
| return 0;
| }
configure:21648: result: yes
configure:21660: checking for type of socket length
configure:21686: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21686: $? = 0
configure:21706: result: socklen_t *
configure:21715: checking for stack_t
configure:21715: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21715: $? = 0
configure:21715: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:82:22: error: expected expression
if (sizeof ((stack_t)))
^
1 error generated.
configure:21715: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| /* end confdefs.h. */
| #include <signal.h>
|
| int
| main ()
| {
| if (sizeof ((stack_t)))
| return 0;
| ;
| return 0;
| }
configure:21715: result: yes
configure:21731: checking for intptr_t
configure:21731: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21731: $? = 0
configure:21731: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:88:23: error: expected expression
if (sizeof ((intptr_t)))
^
1 error generated.
configure:21731: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((intptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21731: result: yes
configure:21746: checking for uintptr_t
configure:21746: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21746: $? = 0
configure:21746: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:89:24: error: expected expression
if (sizeof ((uintptr_t)))
^
1 error generated.
configure:21746: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((uintptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21746: result: yes
configure:21769: checking whether byte ordering is bigendian
configure:21792: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21792: $? = 0
configure:21810: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:87:2: error: use of undeclared identifier 'not'
not big endian
^
1 error generated.
configure:21810: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/param.h>
|
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| not big endian
| #endif
|
| ;
| return 0;
| }
configure:21884: result: no
configure:21898: checking for an ANSI C-conforming const
configure:21964: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21964: $? = 0
configure:21971: result: yes
configure:21983: checking for cc option to accept ISO C99
configure:22132: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:22132: $? = 0
configure:22145: result: none needed
configure:22253: checking for cc option to accept ISO Standard C
configure:22264: result: none needed
configure:22271: checking for inline
configure:22286: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:22286: $? = 0
configure:22293: result: inline
configure:22309: checking size of int
configure:22314: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22314: $? = 0
configure:22314: ./conftest
configure:22314: $? = 0
configure:22328: result: 4
configure:22350: checking size of long
configure:22355: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22355: $? = 0
configure:22355: ./conftest
configure:22355: $? = 0
configure:22369: result: 8
configure:22383: checking size of long long
configure:22388: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22388: $? = 0
configure:22388: ./conftest
configure:22388: $? = 0
configure:22402: result: 8
configure:22416: checking size of double
configure:22421: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22421: $? = 0
configure:22421: ./conftest
configure:22421: $? = 0
configure:22435: result: 8
configure:22449: checking size of size_t
configure:22454: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22454: $? = 0
configure:22454: ./conftest
configure:22454: $? = 0
configure:22468: result: 8
configure:22498: checking size of long double
configure:22503: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22503: $? = 0
configure:22503: ./conftest
configure:22503: $? = 0
configure:22517: result: 16
configure:22533: checking whether we can compute C Make dependencies
configure:22571: result: yes, using $(CC) -MM
configure:22595: checking whether cc supports -c -o FILE.lo
configure:22605: cc -g -O2 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22608: $? = 0
configure:22611: cc -g -O2 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22614: $? = 0
configure:22622: result: yes
configure:22651: checking for cc option to support OpenMP
configure:22666: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
conftest.c:93:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22666: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
conftest.c:93:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 -xopenmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: error: language not recognized: 'openmp'
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 -openmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
conftest.c:93:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 -mp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
conftest.c:93:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 -omp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
conftest.c:93:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 -qsmp=omp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: warning: argument unused during compilation: '-qsmp=omp'
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
conftest.c:93:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 -homp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: warning: argument unused during compilation: '-homp'
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
conftest.c:93:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 -Popenmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: warning: argument unused during compilation: '-Popenmp'
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
conftest.c:93:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: cc -o conftest -g -O2 --openmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: error: unsupported option '--openmp'
configure:22684: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22698: result: unsupported
configure:22729: checking how to get verbose linking output from /usr/bin/gfortran
configure:22739: /usr/bin/gfortran -c conftest.f >&5
configure:22739: $? = 0
configure:22757: /usr/bin/gfortran -o conftest -v -L/usr/local/lib conftest.f
Using built-in specs.
Target: i686-apple-darwin11
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/f951 conftest.f -ffixed-form -fPIC -quiet -dumpbase conftest.f -mmacosx-version-min=10.8.3 -m64 -mtune=core2 -auxbase conftest -version -I /usr/lib/gcc/i686-apple-darwin11/4.2.1/finclude -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//cc3cXfLf.s
GNU F95 version 4.2.1 (Apple Inc. build 5666) (dot 3) (i686-apple-darwin11)
compiled by GNU C version 4.2.1 (Apple Inc. build 5666) (dot 3).
GGC heuristics: --param ggc-min-expand=150 --param ggc-min-heapsize=131072
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/as -arch x86_64 -force_cpusubtype_ALL -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//ccyjzdXi.o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//cc3cXfLf.s
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/collect2 -dynamic -arch x86_64 -macosx_version_min 10.8.3 -weak_reference_mismatches non-weak -o conftest -lcrt1.10.6.o -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//ccyjzdXi.o -lgfortranbegin -lgfortran -lSystem -lgcc -lSystem
configure:22840: result: -v
configure:22842: checking for Fortran 77 libraries of /usr/bin/gfortran
configure:22865: /usr/bin/gfortran -o conftest -v -L/usr/local/lib conftest.f
Using built-in specs.
Target: i686-apple-darwin11
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/f951 conftest.f -ffixed-form -fPIC -quiet -dumpbase conftest.f -mmacosx-version-min=10.8.3 -m64 -mtune=core2 -auxbase conftest -version -I /usr/lib/gcc/i686-apple-darwin11/4.2.1/finclude -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//ccpQjU6p.s
GNU F95 version 4.2.1 (Apple Inc. build 5666) (dot 3) (i686-apple-darwin11)
compiled by GNU C version 4.2.1 (Apple Inc. build 5666) (dot 3).
GGC heuristics: --param ggc-min-expand=150 --param ggc-min-heapsize=131072
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/as -arch x86_64 -force_cpusubtype_ALL -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//cc9mP6Sn.o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//ccpQjU6p.s
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/collect2 -dynamic -arch x86_64 -macosx_version_min 10.8.3 -weak_reference_mismatches non-weak -o conftest -lcrt1.10.6.o -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//cc9mP6Sn.o -lgfortranbegin -lgfortran -lSystem -lgcc -lSystem
configure:23061: result: -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. -lgfortranbegin -lgfortran
configure:23079: checking how to get verbose linking output from cc
configure:23095: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:23095: $? = 0
configure:23117: cc -o conftest -g -O2 -v -I/usr/local/include -L/usr/local/lib conftest.c >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
"/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.8.0 -emit-obj -disable-free -disable-llvm-verifier -main-file-name conftest.c -pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu core2 -target-linker-version 136 -v -g -resource-dir /usr/bin/../lib/clang/4.2 -isystem /usr/local/include -isystem /opt/X11/include/freetype2 -isystem /usr/include/libxml2 -isystem /opt/X11/include -I /usr/local/include -I /usr/local/opt/readline/include -fmodule-cache-path /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/clang-module-cache -O2 -fdebug-compilation-dir /private/tmp/r-0r9Q/R-3.0.1 -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fblocks -fobjc-runtime=macosx-10.8.0 -fobjc-dispatch-method=mixed -fobjc-default-synthesize-properties -fdiagnostics-show-option -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-b6db3w.o -x c conftest.c
clang -cc1 version 4.2 based upon LLVM 3.2svn default target x86_64-apple-darwin12.3.0
ignoring duplicate directory "/usr/local/include"
as it is a non-system directory that duplicates a system directory
ignoring duplicate directory "/usr/local/include"
#include "..." search starts here:
#include <...> search starts here:
/usr/local/opt/readline/include
/usr/local/include
/opt/X11/include/freetype2
/usr/include/libxml2
/opt/X11/include
/usr/bin/../lib/clang/4.2/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/usr/bin/ld" -demangle -dynamic -arch x86_64 -macosx_version_min 10.8.0 -o conftest -L/usr/local/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-b6db3w.o -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
"/usr/bin/dsymutil" -o conftest.dSYM conftest
configure:23163: result: -v
configure:23165: checking for C libraries of cc
configure:23192: cc -o conftest -g -O2 -v -I/usr/local/include -L/usr/local/lib conftest.c >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
"/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.8.0 -emit-obj -disable-free -disable-llvm-verifier -main-file-name conftest.c -pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu core2 -target-linker-version 136 -v -g -resource-dir /usr/bin/../lib/clang/4.2 -isystem /usr/local/include -isystem /opt/X11/include/freetype2 -isystem /usr/include/libxml2 -isystem /opt/X11/include -I /usr/local/include -I /usr/local/opt/readline/include -fmodule-cache-path /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/clang-module-cache -O2 -fdebug-compilation-dir /private/tmp/r-0r9Q/R-3.0.1 -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fblocks -fobjc-runtime=macosx-10.8.0 -fobjc-dispatch-method=mixed -fobjc-default-synthesize-properties -fdiagnostics-show-option -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-UoIatw.o -x c conftest.c
clang -cc1 version 4.2 based upon LLVM 3.2svn default target x86_64-apple-darwin12.3.0
ignoring duplicate directory "/usr/local/include"
as it is a non-system directory that duplicates a system directory
ignoring duplicate directory "/usr/local/include"
#include "..." search starts here:
#include <...> search starts here:
/usr/local/opt/readline/include
/usr/local/include
/opt/X11/include/freetype2
/usr/include/libxml2
/opt/X11/include
/usr/bin/../lib/clang/4.2/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/usr/bin/ld" -demangle -dynamic -arch x86_64 -macosx_version_min 10.8.0 -o conftest -L/usr/local/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-UoIatw.o -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
"/usr/bin/dsymutil" -o conftest.dSYM conftest
configure:23343: result: -L/usr/local/lib -L/usr/local/opt/readline/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
configure:23478: checking for dummy main to link with Fortran 77 libraries
configure:23512: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran >&5
configure:23512: $? = 0
configure:23557: result: none
configure:23590: checking for Fortran 77 name-mangling scheme
configure:23603: /usr/bin/gfortran -c conftest.f >&5
configure:23603: $? = 0
configure:23644: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -lm -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran >&5
Undefined symbols for architecture x86_64:
"_foobar", referenced from:
_main in conftest-5F7xJ4.o
(maybe you meant: _foobar_)
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:23644: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char foobar ();
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| return foobar ();
| ;
| return 0;
| }
configure:23644: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -lm -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran >&5
configure:23644: $? = 0
configure:23702: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -lm -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran >&5
configure:23702: $? = 0
configure:23744: result: lower case, underscore, no extra underscore
configure:23821: checking whether /usr/bin/gfortran appends underscores to external names
configure:23837: result: yes
configure:23849: checking whether /usr/bin/gfortran appends extra underscores to external names
configure:23865: result: no
configure:23879: checking whether mixed C/Fortran code can be run
configure:23937: result: yes
configure:23951: checking whether /usr/bin/gfortran and cc agree on int and double
configure:24029: result: yes
configure:24043: checking whether /usr/bin/gfortran and cc agree on double complex
configure:24119: result: yes
configure:24154: checking for /usr/bin/gfortran option to support OpenMP
configure:24169: /usr/bin/gfortran -o conftest -L/usr/local/lib conftest.f -lm >&5
conftest.f:5.9:
tid = 42
1
Error: Symbol 'tid' at (1) has no IMPLICIT type
configure:24169: $? = 1
configure: failed program was:
|
| program main
| implicit none
| !$ integer tid
| tid = 42
| call omp_set_num_threads(2)
| end
|
configure:24187: /usr/bin/gfortran -o conftest -fopenmp -L/usr/local/lib conftest.f -lm >&5
configure:24187: $? = 0
configure:24201: result: -fopenmp
configure:24223: checking whether c++ accepts -M for generating dependencies
configure:24238: result: yes
configure:24283: checking for c++ option to support OpenMP
configure:24298: c++ -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:95:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:97:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24298: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:95:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:97:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 -xopenmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: error: language not recognized: 'openmp'
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 -openmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:95:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:97:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 -mp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:95:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:97:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 -omp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:95:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:97:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 -qsmp=omp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: warning: argument unused during compilation: '-qsmp=omp'
conftest.cpp:95:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:97:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 -homp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: warning: argument unused during compilation: '-homp'
conftest.cpp:95:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:97:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 -Popenmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: warning: argument unused during compilation: '-Popenmp'
conftest.cpp:95:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:97:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24316: c++ -o conftest -g -O2 --openmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: error: unsupported option '--openmp'
configure:24316: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24330: result: unsupported
configure:24350: checking whether we can compute ObjC Make dependencies
configure:24369: result: yes, using cc -MM
configure:24414: checking for ObjC runtime library
configure:24452: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.m -lm -lobjc >&5
configure:24452: $? = 0
configure:24465: result: -lobjc
configure:24471: checking for ObjC runtime style
configure:24510: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.m -lobjc -lm >&5
conftest.m:112:14: warning: implicit declaration of function 'objc_lookup_class' is invalid in C99 [-Wimplicit-function-declaration]
id class = objc_lookup_class ("Object");
^
conftest.m:112:6: warning: incompatible integer to pointer conversion initializing 'id' with an expression of type 'int' [-Wint-conversion]
id class = objc_lookup_class ("Object");
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2 warnings generated.
Undefined symbols for architecture x86_64:
"_objc_lookup_class", referenced from:
_main in conftest-cEGzht.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:24510: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
|
| /* see PR#15107 */
| #undef __OBJC2__
| #include <objc/objc.h>
| #include <objc/objc-api.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| id class = objc_lookup_class ("Object");
|
| ;
| return 0;
| }
|
configure:24510: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.m -lobjc -lm >&5
conftest.m:112:14: warning: implicit declaration of function 'objc_lookUpClass' is invalid in C99 [-Wimplicit-function-declaration]
id class = objc_lookUpClass ("Object");
^
conftest.m:112:6: warning: incompatible integer to pointer conversion initializing 'id' with an expression of type 'int' [-Wint-conversion]
id class = objc_lookUpClass ("Object");
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~
2 warnings generated.
configure:24510: $? = 0
configure:24527: result: next
configure:24558: checking whether cc accepts -fobjc-exceptions
configure:24590: cc -o conftest -g -O2 -fobjc-exceptions -I/usr/local/include -L/usr/local/lib conftest.m -lm >&5
configure:24590: $? = 0
configure:24608: result: yes
configure:24634: checking for cached Foundation settings
configure:24644: result: no
configure:24677: checking whether default Foundation framework works
configure:24706: cc -o conftest -g -O2 -fobjc-exceptions -I/usr/local/include -L/usr/local/lib conftest.m -lm >&5
Undefined symbols for architecture x86_64:
"_OBJC_CLASS_$_NSAutoreleasePool", referenced from:
objc-class-ref in conftest-S8BmBV.o
"_objc_msgSend", referenced from:
_main in conftest-S8BmBV.o
"_objc_msgSend_fixup", referenced from:
l_objc_msgSend_fixup_alloc in conftest-S8BmBV.o
l_objc_msgSend_fixup_release in conftest-S8BmBV.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:24706: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| /* end confdefs.h. */
|
| #import <Foundation/Foundation.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| NSAutoreleasePool *pool = [[NSAutoreleasePool alloc] init];
| NSString *s = @"hello, world";
|
| [pool release];
|
| ;
| return 0;
| }
configure:24716: result: no
configure:24725: checking whether -framework Foundation works
configure:24754: cc -o conftest -g -O2 -fobjc-exceptions -I/usr/local/include -L/usr/local/lib conftest.m -lm -framework Foundation >&5
configure:24754: $? = 0
configure:24760: result: yes
configure:24933: checking for working Foundation implementation
configure:24940: result: yes
configure:24950: checking whether C runtime needs -D__NO_MATH_INLINES
configure:24977: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:106:3: warning: implicitly declaring library function 'exit' with type 'void (int) __attribute__((noreturn))'
exit(0);
^
conftest.c:106:3: note: please include the header <stdlib.h> or explicitly provide a declaration for 'exit'
1 warning generated.
configure:24977: $? = 0
configure:24977: ./conftest
configure:24977: $? = 0
configure:24987: result: no
configure:26035: checking for xmkmf
configure:26068: result: no
configure:26231: checking whether linker supports dynamic lookup
cc -g -O2 conftest.c -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -o libconftest -lm
configure:26244: result: yes
configure:26749: checking for off_t
configure:26749: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:26749: $? = 0
configure:26749: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:132:20: error: expected expression
if (sizeof ((off_t)))
^
1 error generated.
configure:26749: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((off_t)))
| return 0;
| ;
| return 0;
| }
configure:26749: result: yes
configure:26761: checking for working alloca.h
configure:26786: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26786: $? = 0
configure:26794: result: yes
configure:26802: checking for alloca
configure:26847: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26847: $? = 0
configure:26855: result: yes
configure:26961: checking whether alloca is declared
configure:26961: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:26961: $? = 0
configure:26961: result: yes
configure:26988: checking whether expm1 exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether hypot exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether log1p exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether log1pl exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether log2 exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether log10 exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether nearbyint exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether nearbyintl exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether powl exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether rint exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:26988: checking whether rintl exists and is declared
configure:27016: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27016: $? = 0
configure:27025: result: yes
configure:27039: checking whether va_copy exists and is declared
configure:27067: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27067: $? = 0
configure:27076: result: yes
configure:27092: checking for isblank
configure:27092: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27092: $? = 0
configure:27092: result: yes
configure:27107: checking for fseeko
configure:27107: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27107: $? = 0
configure:27107: result: yes
configure:27107: checking for ftello
configure:27107: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27107: $? = 0
configure:27107: result: yes
configure:27107: checking for matherr
configure:27107: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27107: $? = 0
configure:27107: result: yes
configure:27121: checking whether fcntl exists and is declared
configure:27149: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27149: $? = 0
configure:27158: result: yes
configure:27171: checking whether getgrgid exists and is declared
configure:27199: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27199: $? = 0
configure:27208: result: yes
configure:27221: checking whether getpwuid exists and is declared
configure:27249: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27249: $? = 0
configure:27258: result: yes
configure:27271: checking whether kill exists and is declared
configure:27299: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27299: $? = 0
configure:27308: result: yes
configure:27271: checking whether sigaction exists and is declared
configure:27299: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27299: $? = 0
configure:27308: result: yes
configure:27271: checking whether sigaltstack exists and is declared
configure:27299: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27299: $? = 0
configure:27308: result: yes
configure:27271: checking whether sigemptyset exists and is declared
configure:27299: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27299: $? = 0
configure:27308: result: yes
configure:27321: checking whether fdopen exists and is declared
configure:27349: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27349: $? = 0
configure:27358: result: yes
configure:27321: checking whether popen exists and is declared
configure:27349: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27349: $? = 0
configure:27358: result: yes
configure:27375: checking whether setenv exists and is declared
configure:27403: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27403: $? = 0
configure:27412: result: yes
configure:27375: checking whether unsetenv exists and is declared
configure:27403: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27403: $? = 0
configure:27412: result: yes
configure:27425: checking whether getrlimit exists and is declared
configure:27453: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27453: $? = 0
configure:27462: result: yes
configure:27425: checking whether getrusage exists and is declared
configure:27453: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27453: $? = 0
configure:27462: result: yes
configure:27425: checking whether getpriority exists and is declared
configure:27453: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27453: $? = 0
configure:27462: result: yes
configure:27475: checking whether chmod exists and is declared
configure:27503: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27503: $? = 0
configure:27512: result: yes
configure:27475: checking whether mkfifo exists and is declared
configure:27503: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27503: $? = 0
configure:27512: result: yes
configure:27475: checking whether stat exists and is declared
configure:27503: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27503: $? = 0
configure:27512: result: yes
configure:27475: checking whether umask exists and is declared
configure:27503: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27503: $? = 0
configure:27512: result: yes
configure:27528: checking whether gettimeofday exists and is declared
configure:27556: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27556: $? = 0
configure:27565: result: yes
configure:27528: checking whether utimes exists and is declared
configure:27556: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27556: $? = 0
configure:27565: result: yes
configure:27578: checking whether times exists and is declared
configure:27606: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27606: $? = 0
configure:27615: result: yes
configure:27628: checking whether access exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether chdir exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether execv exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether ftruncate exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether getcwd exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether geteuid exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether getuid exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether link exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether readlink exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether symlink exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27628: checking whether sysconf exists and is declared
configure:27658: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27658: $? = 0
configure:27667: result: yes
configure:27681: checking whether sched_setaffinity exists and is declared
configure:27709: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:162:22: error: use of undeclared identifier 'sched_setaffinity'
char *p = (char *) sched_setaffinity;
^
1 error generated.
configure:27709: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| /* end confdefs.h. */
| #include <sched.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| #ifndef sched_setaffinity
| char *p = (char *) sched_setaffinity;
| #endif
|
| ;
| return 0;
| }
configure:27718: result: no
configure:27681: checking whether sched_getaffinity exists and is declared
configure:27709: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:162:22: error: use of undeclared identifier 'sched_getaffinity'
char *p = (char *) sched_getaffinity;
^
1 error generated.
configure:27709: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| /* end confdefs.h. */
| #include <sched.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| #ifndef sched_getaffinity
| char *p = (char *) sched_getaffinity;
| #endif
|
| ;
| return 0;
| }
configure:27718: result: no
configure:27732: checking whether utime exists and is declared
configure:27760: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27760: $? = 0
configure:27769: result: yes
configure:27784: checking for clock_gettime in -lrt
configure:27817: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lrt -lm >&5
ld: library not found for -lrt
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:27817: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char clock_gettime ();
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| return clock_gettime ();
| ;
| return 0;
| }
configure:27826: result: no
configure:27840: checking whether clock_gettime exists and is declared
configure:27868: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:163:22: error: use of undeclared identifier 'clock_gettime'
char *p = (char *) clock_gettime;
^
1 error generated.
configure:27868: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| /* end confdefs.h. */
| #include <time.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| #ifndef clock_gettime
| char *p = (char *) clock_gettime;
| #endif
|
| ;
| return 0;
| }
configure:27877: result: no
configure:27840: checking whether timespec_get exists and is declared
configure:27868: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:163:22: error: use of undeclared identifier 'timespec_get'
char *p = (char *) timespec_get;
^
1 error generated.
configure:27868: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| /* end confdefs.h. */
| #include <time.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| #ifndef timespec_get
| char *p = (char *) timespec_get;
| #endif
|
| ;
| return 0;
| }
configure:27877: result: no
configure:27892: checking for putenv
configure:27892: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27892: $? = 0
configure:27892: result: yes
configure:27901: checking whether putenv is declared
configure:27901: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:27901: $? = 0
configure:27901: result: yes
configure:27916: checking for vasprintf
configure:27916: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:185:19: warning: format string missing [-Wformat]
return vasprintf ();
~~~~~~~~~ ^
1 warning generated.
configure:27916: $? = 0
configure:27916: result: yes
configure:27925: checking whether vasprintf is declared
configure:27925: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:27925: $? = 0
configure:27925: result: yes
configure:27940: checking for mempcpy
configure:27940: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
Undefined symbols for architecture x86_64:
"_mempcpy", referenced from:
_main in conftest-wKrDPW.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:27940: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| /* end confdefs.h. */
| /* Define mempcpy to an innocuous variant, in case <limits.h> declares mempcpy.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define mempcpy innocuous_mempcpy
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char mempcpy (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef mempcpy
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char mempcpy ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_mempcpy || defined __stub___mempcpy
| choke me
| #endif
|
| int
| main ()
| {
| return mempcpy ();
| ;
| return 0;
| }
configure:27940: result: no
configure:27953: checking for realpath
configure:27953: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27953: $? = 0
configure:27953: result: yes
configure:27962: checking whether realpath is declared
configure:27962: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:27962: $? = 0
configure:27962: result: yes
configure:27982: checking whether glob exists and is declared
configure:28012: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28012: $? = 0
configure:28021: result: yes
configure:28073: checking for isnan
configure:28073: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28073: $? = 0
configure:28073: result: yes
configure:28082: checking whether isfinite is declared
configure:28082: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28082: $? = 0
configure:28082: result: yes
configure:28093: checking whether isnan is declared
configure:28093: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28093: $? = 0
configure:28093: result: yes
configure:28105: checking whether you have IEEE 754 floating-point arithmetic
configure:28117: result: yes
configure:28130: checking whether putenv("FOO") can unset an environment variable
configure:28160: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28160: $? = 0
configure:28160: ./conftest
configure:28160: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| /* end confdefs.h. */
|
| #include "confdefs.h"
| #include <stdlib.h>
| #include <string.h>
| int main()
| {
| char *p;
| #ifdef HAVE_PUTENV
| putenv("R_TEST=testit");
| p = getenv("R_TEST");
| if(!p) exit(10);
| if(strcmp(p, "testit")) exit(11);
| putenv("R_TEST");
| p = getenv("R_TEST");
| if(!p) exit(0);
| #endif
| exit(1);
| }
|
configure:28170: result: no
configure:28180: checking whether putenv("FOO=") can unset an environment variable
configure:28210: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28210: $? = 0
configure:28210: ./conftest
configure:28210: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| /* end confdefs.h. */
|
| #include "confdefs.h"
| #include <stdlib.h>
| #include <string.h>
| int main()
| {
| char *p;
| #ifdef HAVE_PUTENV
| putenv("R_TEST=testit");
| p = getenv("R_TEST");
| if(!p) exit(10);
| if(strcmp(p, "testit")) exit(11);
| putenv("R_TEST=");
| p = getenv("R_TEST");
| if(!p) exit(0);
| #endif
| exit(1);
| }
|
configure:28220: result: no
configure:28235: checking for nl_langinfo and CODESET
configure:28259: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28259: $? = 0
configure:28268: result: yes
configure:28305: checking for mkdtemp
configure:28305: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28305: $? = 0
configure:28305: result: yes
configure:28318: checking for strdup
configure:28318: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:186:6: warning: incompatible redeclaration of library function 'strdup'
char strdup ();
^
conftest.c:186:6: note: 'strdup' is a builtin with type 'char *(const char *)'
1 warning generated.
configure:28318: $? = 0
configure:28318: result: yes
configure:28331: checking for strncasecmp
configure:28331: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:187:6: warning: incompatible redeclaration of library function 'strncasecmp'
char strncasecmp ();
^
conftest.c:187:6: note: 'strncasecmp' is a builtin with type 'int (const char *, const char *, unsigned long)'
1 warning generated.
configure:28331: $? = 0
configure:28331: result: yes
configure:28346: checking whether mkdtemp is declared
configure:28346: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28346: $? = 0
configure:28346: result: yes
configure:28356: checking whether strdup is declared
configure:28356: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28356: $? = 0
configure:28356: result: yes
configure:28366: checking whether strncasecmp is declared
configure:28366: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28366: $? = 0
configure:28366: result: yes
configure:28378: checking for library containing connect
configure:28417: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28417: $? = 0
configure:28434: result: none required
configure:28443: checking for library containing gethostbyname
configure:28482: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28482: $? = 0
configure:28499: result: none required
configure:28507: checking for library containing xdr_string
configure:28546: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28546: $? = 0
configure:28563: result: none required
configure:28571: checking for __setfpucw
configure:28571: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
Undefined symbols for architecture x86_64:
"___setfpucw", referenced from:
_main in conftest-z4s8D6.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:28571: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| /* end confdefs.h. */
| /* Define __setfpucw to an innocuous variant, in case <limits.h> declares __setfpucw.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define __setfpucw innocuous___setfpucw
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char __setfpucw (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef __setfpucw
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char __setfpucw ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub___setfpucw || defined __stub_____setfpucw
| choke me
| #endif
|
| int
| main ()
| {
| return __setfpucw ();
| ;
| return 0;
| }
configure:28571: result: no
configure:28614: checking for working calloc
configure:28632: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28632: $? = 0
configure:28632: ./conftest
configure:28632: $? = 0
configure:28642: result: yes
configure:28651: checking for working isfinite
configure:28674: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28674: $? = 0
configure:28674: ./conftest
configure:28674: $? = 0
configure:28684: result: yes
configure:28694: checking for working log1p
configure:28735: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28735: $? = 0
configure:28735: ./conftest
configure:28735: $? = 0
configure:28745: result: yes
configure:28757: checking whether ftell works correctly on files opened for append
configure:28786: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:175:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int]
main() {
^~~~
conftest.c:185:5: warning: implicit declaration of function 'unlink' is invalid in C99 [-Wimplicit-function-declaration]
unlink("testit");
^
2 warnings generated.
configure:28786: $? = 0
configure:28786: ./conftest
configure:28786: $? = 0
configure:28796: result: yes
configure:28805: checking for working sigaction
configure:28834: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28834: $? = 0
configure:28834: ./conftest
configure:28834: $? = 0
configure:28844: result: yes
configure:28852: checking whether mktime sets errno
configure:28881: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28881: $? = 0
configure:28881: ./conftest
configure:28881: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| /* end confdefs.h. */
|
| #include <stdlib.h>
| #include <time.h>
| #include <errno.h>
|
| int main()
| {
| struct tm tm;
| /* It's hard to know what is an error, since mktime is allowed to
| fix up times and there are 64-bit time_t about.
| But this works for now (yes on Solaris, no on glibc). */
| tm.tm_year = 3000; tm.tm_mon = 0; tm.tm_mday = 0;
| tm.tm_hour = 0; tm.tm_min = 0; tm.tm_sec = 0; tm.tm_isdst = -1;
| errno = 0;
| mktime(&tm);
| exit(errno == 0);
| }
|
configure:28891: result: no
configure:28900: checking complex.h usability
configure:28900: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28900: $? = 0
configure:28900: result: yes
configure:28900: checking complex.h presence
configure:28900: cc -E -I/usr/local/include conftest.c
configure:28900: $? = 0
configure:28900: result: yes
configure:28900: checking for complex.h
configure:28900: result: yes
configure:28909: checking for double complex
configure:28909: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28909: $? = 0
configure:28909: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:178:29: error: expected expression
if (sizeof ((double complex)))
^
1 error generated.
configure:28909: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| /* end confdefs.h. */
| #include <complex.h>
|
| int
| main ()
| {
| if (sizeof ((double complex)))
| return 0;
| ;
| return 0;
| }
configure:28909: result: yes
configure:28918: checking whether C99 double complex is supported
configure:28920: result: yes
configure:28929: checking whether cabs exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether carg exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether cexp exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether clog exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether csqrt exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether cpow exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether ccos exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether csin exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether ctan exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether cacos exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether casin exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether catan exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether ccosh exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether csinh exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28929: checking whether ctanh exists and is declared
configure:28957: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28957: $? = 0
configure:28966: result: yes
configure:28981: checking for cblas_cdotu_sub in vecLib framework
configure:29015: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -framework vecLib -lm >&5
configure:29015: $? = 0
configure:29033: result: -framework vecLib
configure:30163: checking iconv.h usability
configure:30163: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30163: $? = 0
configure:30163: result: yes
configure:30163: checking iconv.h presence
configure:30163: cc -E -I/usr/local/include conftest.c
configure:30163: $? = 0
configure:30163: result: yes
configure:30163: checking for iconv.h
configure:30163: result: yes
configure:30175: checking for iconv
configure:30206: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
Undefined symbols for architecture x86_64:
"_iconv", referenced from:
_main in conftest-e0pxe2.o
"_iconv_close", referenced from:
_main in conftest-e0pxe2.o
"_iconv_open", referenced from:
_main in conftest-e0pxe2.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:30206: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| /* end confdefs.h. */
| #include <stdlib.h>
| #ifdef HAVE_ICONV_H
| #include <iconv.h>
| #endif
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| iconv_t cd = iconv_open("","");
| iconv(cd,NULL,NULL,NULL,NULL);
| iconv_close(cd);
| ;
| return 0;
| }
configure:30238: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30238: $? = 0
configure:30249: result: in libiconv
configure:30256: checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"
configure:30324: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30324: $? = 0
configure:30324: ./conftest
configure:30324: $? = 0
configure:30334: result: yes
configure:30348: checking for iconvlist
configure:30379: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
conftest.c:208:11: warning: incompatible pointer types passing 'int (unsigned int, char **, void *)' to parameter of type 'int (*)(unsigned int, const char *const *, void *)' [-Wincompatible-pointer-types]
iconvlist(count_one, NULL);
^~~~~~~~~
/usr/include/iconv.h:170:34: note: passing argument to parameter here
void iconvlist (int (* /*do_one*/) (unsigned int /*namescount*/,
^
1 warning generated.
configure:30379: $? = 0
configure:30386: result: yes
configure:30422: checking for iconv
configure:30452: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30452: $? = 0
configure:30492: result: yes
configure:30513: checking for iconv declaration
configure:30550: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30550: $? = 0
configure:30561: result:
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
configure:30579: checking wchar.h usability
configure:30579: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30579: $? = 0
configure:30579: result: yes
configure:30579: checking wchar.h presence
configure:30579: cc -E -I/usr/local/include conftest.c
configure:30579: $? = 0
configure:30579: result: yes
configure:30579: checking for wchar.h
configure:30579: result: yes
configure:30579: checking wctype.h usability
configure:30579: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30579: $? = 0
configure:30579: result: yes
configure:30579: checking wctype.h presence
configure:30579: cc -E -I/usr/local/include conftest.c
configure:30579: $? = 0
configure:30579: result: yes
configure:30579: checking for wctype.h
configure:30579: result: yes
configure:30602: checking whether mbrtowc exists and is declared
configure:30630: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30630: $? = 0
configure:30639: result: yes
configure:30602: checking whether wcrtomb exists and is declared
configure:30630: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30630: $? = 0
configure:30639: result: yes
configure:30602: checking whether wcscoll exists and is declared
configure:30630: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30630: $? = 0
configure:30639: result: yes
configure:30602: checking whether wcsftime exists and is declared
configure:30630: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30630: $? = 0
configure:30639: result: yes
configure:30602: checking whether wcstod exists and is declared
configure:30630: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30630: $? = 0
configure:30639: result: yes
configure:30652: checking whether mbstowcs exists and is declared
configure:30680: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30680: $? = 0
configure:30689: result: yes
configure:30652: checking whether wcstombs exists and is declared
configure:30680: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30680: $? = 0
configure:30689: result: yes
configure:30702: checking whether wctrans exists and is declared
configure:30731: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30731: $? = 0
configure:30740: result: yes
configure:30702: checking whether iswblank exists and is declared
configure:30731: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30731: $? = 0
configure:30740: result: yes
configure:30702: checking whether wctype exists and is declared
configure:30731: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30731: $? = 0
configure:30740: result: yes
configure:30702: checking whether iswctype exists and is declared
configure:30731: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30731: $? = 0
configure:30740: result: yes
configure:30764: checking for wctrans_t
configure:30764: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30764: $? = 0
configure:30764: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:213:24: error: expected expression
if (sizeof ((wctrans_t)))
^
1 error generated.
configure:30764: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| /* end confdefs.h. */
| #include <wchar.h>
| #include <wctype.h>
|
| int
| main ()
| {
| if (sizeof ((wctrans_t)))
| return 0;
| ;
| return 0;
| }
configure:30764: result: yes
configure:30775: checking for mbstate_t
configure:30775: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30775: $? = 0
configure:30775: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:214:24: error: expected expression
if (sizeof ((mbstate_t)))
^
1 error generated.
configure:30775: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| /* end confdefs.h. */
| #include <wchar.h>
| #include <wctype.h>
|
| int
| main ()
| {
| if (sizeof ((mbstate_t)))
| return 0;
| ;
| return 0;
| }
configure:30775: result: yes
configure:30801: checking for ICU
configure:30836: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv -licuuc -licui18n >&5
conftest.c:210:10: fatal error: 'unicode/utypes.h' file not found
#include <unicode/utypes.h>
^
1 error generated.
configure:30836: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| /* end confdefs.h. */
|
| #include <unicode/utypes.h>
| #include <unicode/ucol.h>
| #include <unicode/uloc.h>
| #include <unicode/uiter.h>
|
| #include <stdlib.h>
|
| int main () {
| UErrorCode status = U_ZERO_ERROR;
| UCollator *collator;
| UCharIterator aIter;
|
| collator = ucol_open(NULL, &status);
| if (U_FAILURE(status)) exit(1);
| /* check if ICU is complete enough */
| uiter_setUTF8(&aIter, "abc", 3);
| int result = ucol_strcollIter(collator, &aIter, &aIter, &status);
| if (U_FAILURE(status)) exit(1);
| exit(0);
| }
|
configure:30848: result: no
configure:30863: checking for ucol_open in -licucore
configure:30896: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:30896: $? = 0
configure:30905: result: yes
configure:30933: checking for X
configure:31041: cc -E -I/usr/local/include conftest.c
configure:31041: $? = 0
configure:31080: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lX11 -licucore -lm -liconv >&5
configure:31080: $? = 0
configure:31130: result: libraries , headers
configure:31253: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv -lX11 >&5
configure:31253: $? = 0
configure:31367: checking for gethostbyname
configure:31367: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:31367: $? = 0
configure:31367: result: yes
configure:31480: checking for connect
configure:31480: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:31480: $? = 0
configure:31480: result: yes
configure:31537: checking for remove
configure:31537: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:31537: $? = 0
configure:31537: result: yes
configure:31594: checking for shmat
configure:31594: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:31594: $? = 0
configure:31594: result: yes
configure:31660: checking for IceConnectionNumber in -lICE
configure:31693: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lICE -licucore -lm -liconv >&5
configure:31693: $? = 0
configure:31702: result: yes
configure:31717: checking X11/Intrinsic.h usability
configure:31717: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:31717: $? = 0
configure:31717: result: yes
configure:31717: checking X11/Intrinsic.h presence
configure:31717: cc -E -I/usr/local/include conftest.c
configure:31717: $? = 0
configure:31717: result: yes
configure:31717: checking for X11/Intrinsic.h
configure:31717: result: yes
configure:31725: checking for XtToolkitInitialize in -lXt
configure:31758: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lXt -lX11 -licucore -lm -liconv >&5
configure:31758: $? = 0
configure:31767: result: yes
configure:31790: result: using X11 ... yes
configure:31806: checking for KeySym
configure:31806: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:31806: $? = 0
configure:31806: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:218:21: error: expected expression
if (sizeof ((KeySym)))
^
1 error generated.
configure:31806: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| /* end confdefs.h. */
| #include <X11/X.h>
|
| int
| main ()
| {
| if (sizeof ((KeySym)))
| return 0;
| ;
| return 0;
| }
configure:31806: result: yes
configure:31825: checking X11/Xmu/Atoms.h usability
configure:31825: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:31825: $? = 0
configure:31825: result: yes
configure:31825: checking X11/Xmu/Atoms.h presence
configure:31825: cc -E -I/usr/local/include conftest.c
configure:31825: $? = 0
configure:31825: result: yes
configure:31825: checking for X11/Xmu/Atoms.h
configure:31825: result: yes
configure:31833: checking for XmuInternAtom in -lXmu
configure:31866: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lXmu -lX11 -lXt -licucore -lm -liconv >&5
configure:31866: $? = 0
configure:31875: result: yes
configure:31900: checking whether pkg-config knows about cairo and pango
configure:31912: result: no
configure:31985: checking whether pkg-config knows about cairo
configure:31997: result: yes
configure:32042: checking whether cairo is >= 1.2 and works
configure:32064: cc -o conftest -g -O2 -fPIC -I/usr/local/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -L/usr/local/lib conftest.c -licucore -lm -liconv -L/opt/X11/lib -lz -lcairo -lz -lpixman-1 -lfontconfig -lexpat -lfreetype -lz -lbz2 -lpng15 -lz -lxcb-shm -lX11-xcb -lxcb-render -lXrender -lX11 -lxcb -lXau -lXdmcp >&5
configure:32064: $? = 0
configure:32075: result: yes
configure:32129: checking for CFStringGetSystemEncoding in CoreFoundation framework
configure:32163: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -framework CoreFoundation -licucore -lm -liconv >&5
configure:32163: $? = 0
configure:32181: result: -framework CoreFoundation
configure:32238: checking for tclConfig.sh
configure:32271: result: no
configure:32280: checking for tclConfig.sh in library (sub)directories
configure:32298: result: /usr/local/lib/tclConfig.sh
configure:32313: checking for tkConfig.sh
configure:32346: result: no
configure:32355: checking for tkConfig.sh in library (sub)directories
configure:32373: result: /usr/local/lib/tkConfig.sh
configure:32437: checking tcl.h usability
configure:32437: cc -c -g -O2 -fPIC -I/usr/local/include -I/usr/local/include conftest.c >&5
configure:32437: $? = 0
configure:32437: result: yes
configure:32437: checking tcl.h presence
configure:32437: cc -E -I/usr/local/include -I/usr/local/include conftest.c
configure:32437: $? = 0
configure:32437: result: yes
configure:32437: checking for tcl.h
configure:32437: result: yes
configure:32516: checking tk.h usability
configure:32516: cc -c -g -O2 -fPIC -I/usr/local/include -I/usr/local/include -I/usr/X11/include -I/usr/local/include conftest.c >&5
configure:32516: $? = 0
configure:32516: result: yes
configure:32516: checking tk.h presence
configure:32516: cc -E -I/usr/local/include -I/usr/local/include -I/usr/X11/include -I/usr/local/include conftest.c
configure:32516: $? = 0
configure:32516: result: yes
configure:32516: checking for tk.h
configure:32516: result: yes
configure:32813: checking whether compiling/linking Tcl/Tk code works
configure:32851: cc -o conftest -g -O2 -fPIC -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/X11/include -L/usr/local/lib conftest.c -licucore -lm -liconv -L/usr/local/lib -ltcl8.6 -L/usr/local/lib -ltk8.6 -L/usr/X11/lib -lX11 -Wl,-weak-lXss -lXext >&5
ld: library not found for -ltcl8.6
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:32851: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| /* end confdefs.h. */
| #include <tcl.h>
| #include <tk.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| static char * p1 = (char *) Tcl_Init;
| static char * p2 = (char *) Tk_Init;
|
| ;
| return 0;
| }
configure:32867: result: no
configure:32892: checking for BSD networking
configure:32907: result: yes
configure:32928: checking if jpeglib version >= 6b
configure:32950: result: yes
configure:32955: checking for jpeg_destroy_compress in -ljpeg
configure:32988: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -ljpeg -licucore -lm -liconv -licucore -lm -liconv >&5
configure:32988: $? = 0
configure:32997: result: yes
configure:33014: checking for main in -lz
configure:33041: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lz -licucore -lm -liconv >&5
configure:33041: $? = 0
configure:33050: result: yes
configure:33059: checking if libpng version >= 1.2.7
configure:33081: result: yes
configure:33087: checking for png_create_write_struct in -lpng
configure:33120: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lpng -lz -licucore -lm -liconv -licucore -lm -liconv >&5
configure:33120: $? = 0
configure:33129: result: yes
configure:33148: checking tiffio.h usability
configure:33148: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33148: $? = 0
configure:33148: result: yes
configure:33148: checking tiffio.h presence
configure:33148: cc -E -I/usr/local/include conftest.c
configure:33148: $? = 0
configure:33148: result: yes
configure:33148: checking for tiffio.h
configure:33148: result: yes
configure:33160: checking for TIFFOpen in -ltiff
configure:33193: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -ltiff -ljpeg -lpng -lz -licucore -lm -liconv >&5
configure:33193: $? = 0
configure:33202: result: yes
configure:33283: checking rpc/types.h usability
configure:33283: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33283: $? = 0
configure:33283: result: yes
configure:33283: checking rpc/types.h presence
configure:33283: cc -E -I/usr/local/include conftest.c
configure:33283: $? = 0
configure:33283: result: yes
configure:33283: checking for rpc/types.h
configure:33283: result: yes
configure:33290: checking for rpc/xdr.h
configure:33290: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33290: $? = 0
configure:33290: result: yes
configure:33334: checking for XDR support
configure:33336: result: yes
configure:33455: checking whether zlib support needs to be compiled
configure:33462: result: yes
configure:33464: checking mmap support for zlib
configure:33484: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
conftest.c:235:8: warning: incompatible pointer to integer conversion passing 'void *' to parameter of type 'int' [-Wint-conversion]
exit(mmap((caddr_t)0, (off_t)0, PROT_READ, MAP_SHARED, 0, (off_t)0));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/stdlib.h:159:15: note: passing argument to parameter here
void exit(int) __dead2;
^
1 warning generated.
Undefined symbols for architecture x86_64:
"_main", referenced from:
implicit entry/start for main executable
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:33484: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| /* end confdefs.h. */
|
| #include <stdlib.h>
| #include <sys/types.h>
| #include <sys/mman.h>
| #include <sys/stat.h>
| caddr_t hello() {
| exit(mmap((caddr_t)0, (off_t)0, PROT_READ, MAP_SHARED, 0, (off_t)0));
| }
|
configure:33494: result: yes
configure:33639: checking whether bzip2 support needs to be compiled
configure:33646: result: yes
configure:33661: checking for lzma_version_number in -llzma
configure:33694: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:33694: $? = 0
configure:33703: result: yes
configure:33714: checking lzma.h usability
configure:33714: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33714: $? = 0
configure:33714: result: yes
configure:33714: checking lzma.h presence
configure:33714: cc -E -I/usr/local/include conftest.c
configure:33714: $? = 0
configure:33714: result: yes
configure:33714: checking for lzma.h
configure:33714: result: yes
configure:33728: checking if lzma version >= 4.999
configure:33757: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:33757: $? = 0
configure:33757: ./conftest
configure:33757: $? = 0
configure:33774: result: yes
configure:33923: checking whether PCRE support needs to be compiled
configure:33929: result: yes
configure:33943: checking whether leap seconds are treated according to POSIX
configure:33970: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:33970: $? = 0
configure:33970: ./conftest
configure:33970: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| /* end confdefs.h. */
|
| #include <stdlib.h>
| #include <time.h>
| #include <stdio.h>
| #include "confdefs.h"
|
| int main () {
| struct tm *tm;
| time_t ct = 0; /* required on 64bit AIX */
|
| ctime(&ct);
| ct = ct - (ct % 60);
| tm = gmtime(&ct);
| if(tm->tm_sec == 0) exit(1); else exit(0);
| }
|
configure:33980: result: yes
configure:33990: checking for inline
configure:34006: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:34006: $? = 0
configure:34014: result: inline
configure:34038: checking for sys/time.h
configure:34038: result: yes
configure:34038: checking for stdlib.h
configure:34038: result: yes
configure:34038: checking for unistd.h
configure:34038: result: yes
configure:34038: checking for sys/param.h
configure:34038: result: yes
configure:34055: checking for struct stat.st_atim.tv_nsec
configure:34055: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:251:13: error: no member named 'st_atim' in 'struct stat'
if (ac_aggr.st_atim.tv_nsec)
~~~~~~~ ^
1 error generated.
configure:34055: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/stat.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (ac_aggr.st_atim.tv_nsec)
| return 0;
| ;
| return 0;
| }
configure:34055: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:251:20: error: no member named 'st_atim' in 'struct stat'
if (sizeof ac_aggr.st_atim.tv_nsec)
~~~~~~~ ^
1 error generated.
configure:34055: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/stat.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (sizeof ac_aggr.st_atim.tv_nsec)
| return 0;
| ;
| return 0;
| }
configure:34055: result: no
configure:34114: checking for struct stat.st_atimespec.tv_nsec
configure:34114: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:34114: $? = 0
configure:34114: result: yes
configure:34160: checking for setitimer
configure:34160: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:34160: $? = 0
configure:34160: result: yes
configure:34191: checking for special C compiler options needed for large files
configure:34244: result: no
configure:34250: checking for _FILE_OFFSET_BITS value needed for large files
configure:34283: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:34283: $? = 0
configure:34323: result: no
configure:34424: checking for _LARGEFILE_SOURCE value needed for large files
configure:34451: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:34451: $? = 0
configure:34487: result: no
configure:34523: checking whether KERN_USRSTACK sysctl is supported
configure:34550: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:34550: $? = 0
configure:34550: ./conftest
configure:34550: $? = 0
configure:34560: result: yes
configure:34623: checking for lpr
configure:34639: found /usr/bin/lpr
configure:34650: result: lpr
configure:34671: checking for paperconf
configure:34702: result: false
configure:34850: checking for Fortran compiler version
configure:34859: /usr/bin/gfortran --version >&5
GNU Fortran (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:34870: $? = 0
configure:34859: /usr/bin/gfortran -v >&5
Using built-in specs.
Target: i686-apple-darwin11
Configured with: /Volumes/Media/Builds/gcc-5666.3/build/obj/src/configure --disable-checking --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++,fortran --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:34870: $? = 0
configure:34859: /usr/bin/gfortran -V >&5
gfortran-4.2: argument to `-V' is missing
configure:34870: $? = 1
configure:34859: /usr/bin/gfortran -qversion >&5
i686-apple-darwin11-gfortran-4.2.1: no input files
configure:34870: $? = 1
configure:34879: checking whether we are using the GNU Fortran compiler
configure:34892: /usr/bin/gfortran -c conftest.F >&5
configure:34892: $? = 0
configure:34901: result: yes
configure:34907: checking whether /usr/bin/gfortran accepts -g
configure:34918: /usr/bin/gfortran -c -g conftest.f >&5
configure:34918: $? = 0
configure:34926: result: yes
configure:35062: checking for Fortran compiler version
configure:35071: /usr/bin/gfortran --version >&5
GNU Fortran (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:35082: $? = 0
configure:35071: /usr/bin/gfortran -v >&5
Using built-in specs.
Target: i686-apple-darwin11
Configured with: /Volumes/Media/Builds/gcc-5666.3/build/obj/src/configure --disable-checking --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++,fortran --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:35082: $? = 0
configure:35071: /usr/bin/gfortran -V >&5
gfortran-4.2: argument to `-V' is missing
configure:35082: $? = 1
configure:35071: /usr/bin/gfortran -qversion >&5
i686-apple-darwin11-gfortran-4.2.1: no input files
configure:35082: $? = 1
configure:35091: checking whether we are using the GNU Fortran compiler
configure:35113: result: yes
configure:35119: checking whether /usr/bin/gfortran accepts -g
configure:35138: result: yes
configure:35276: checking if libtool supports shared libraries
configure:35278: result: yes
configure:35281: checking whether to build shared libraries
configure:35301: result: yes
configure:35304: checking whether to build static libraries
configure:35308: result: no
configure:35334: /usr/bin/gfortran -c conftest.f >&5
configure:35337: $? = 0
configure:35447: checking for /usr/bin/gfortran option to produce PIC
configure:35719: result: -fno-common
configure:35728: checking if /usr/bin/gfortran PIC flag -fno-common works
configure:35746: /usr/bin/gfortran -c -fno-common conftest.f >&5
configure:35750: $? = 0
configure:35763: result: yes
configure:35784: checking if /usr/bin/gfortran static flag -static works
configure:35812: result: no
configure:35824: checking if /usr/bin/gfortran supports -c -o file.o
configure:35845: /usr/bin/gfortran -c -o out/conftest2.o conftest.f >&5
configure:35849: $? = 0
configure:35871: result: yes
configure:35876: checking if /usr/bin/gfortran supports -c -o file.o
configure:35923: result: yes
configure:35953: checking whether the /usr/bin/gfortran linker (/usr/bin/ld) supports shared libraries
configure:36926: result: yes
configure:37063: checking dynamic linker characteristics
configure:37656: result: darwin12.3.0 dyld
configure:37707: checking how to hardcode library paths into programs
configure:37732: result: immediate
configure:37773: checking for Fortran flag to compile .f90 files
configure:37793: /usr/bin/gfortran -c conftest.f90 >&5
configure:37793: $? = 0
configure:37802: result: none
configure:37827: checking for Fortran flag to compile .f95 files
configure:37847: /usr/bin/gfortran -c conftest.f95 >&5
configure:37847: $? = 0
configure:37856: result: none
configure:37885: checking for /usr/bin/gfortran option to support OpenMP
configure:37900: /usr/bin/gfortran -o conftest -L/usr/local/lib conftest.f95 -llzma -licucore -lm -liconv >&5
conftest.f95:5.9:
tid = 42
1
Error: Symbol 'tid' at (1) has no IMPLICIT type
configure:37900: $? = 1
configure: failed program was:
|
| program main
| implicit none
| !$ integer tid
| tid = 42
| call omp_set_num_threads(2)
| end
|
configure:37918: /usr/bin/gfortran -o conftest -fopenmp -L/usr/local/lib conftest.f95 -llzma -licucore -lm -liconv >&5
configure:37918: $? = 0
configure:37932: result: -fopenmp
configure:38143: checking for recommended packages
configure:38159: result: yes
configure:38179: checking whether NLS is requested
configure:38188: result: yes
configure:38196: checking for a thread-safe mkdir -p
configure:38235: result: /usr/local/bin/gmkdir -p
configure:38246: checking whether we are using the GNU C Library 2 or newer
conftest.c:245:10: fatal error: 'features.h' file not found
#include <features.h>
^
1 error generated.
configure:38273: result: no
configure:38322: checking for ranlib
configure:38349: result: ranlib
configure:38376: checking for simple visibility declarations
configure:38406: cc -c -g -O2 -fPIC -fvisibility=hidden -I/usr/local/include conftest.c >&5
configure:38406: $? = 0
configure:38415: result: yes
configure:38431: checking for stdint.h
configure:38456: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:38456: $? = 0
configure:38463: result: yes
configure:38482: checking for getpagesize
configure:38482: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:38482: $? = 0
configure:38482: result: yes
configure:38491: checking for working mmap
configure:38638: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:38638: $? = 0
configure:38638: ./conftest
configure:38638: $? = 0
configure:38648: result: yes
configure:38659: checking whether integer division by zero raises SIGFPE
configure:38716: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:38716: $? = 0
configure:38716: ./conftest
configure:38716: $? = 0
configure:38727: result: yes
configure:38740: checking for inttypes.h
configure:38765: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:38765: $? = 0
configure:38772: result: yes
configure:38783: checking for unsigned long long int
configure:38812: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:38812: $? = 0
configure:38820: result: yes
configure:38859: checking for inttypes.h
configure:38859: result: yes
configure:38870: checking whether the inttypes.h PRIxNN macros are broken
configure:38899: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:38899: $? = 0
configure:38907: result: no
configure:38983: checking whether imported symbols can be declared weak
configure:39006: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"_xyzzy", referenced from:
_main in conftest-6NYwF6.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:39006: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| /* end confdefs.h. */
| extern void xyzzy ();
| #pragma weak xyzzy
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| xyzzy();
| ;
| return 0;
| }
configure:39011: result: no
configure:39829: checking for multithread API to use
configure:39831: result: none
configure:39867: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39867: $? = 0
configure:39878: checking argz.h usability
configure:39878: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:288:10: fatal error: 'argz.h' file not found
#include <argz.h>
^
1 error generated.
configure:39878: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <argz.h>
configure:39878: result: no
configure:39878: checking argz.h presence
configure:39878: cc -E -I/usr/local/include conftest.c
conftest.c:255:10: fatal error: 'argz.h' file not found
#include <argz.h>
^
1 error generated.
configure:39878: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| /* end confdefs.h. */
| #include <argz.h>
configure:39878: result: no
configure:39878: checking for argz.h
configure:39878: result: no
configure:39878: checking for inttypes.h
configure:39878: result: yes
configure:39878: checking for limits.h
configure:39878: result: yes
configure:39878: checking for unistd.h
configure:39878: result: yes
configure:39878: checking for sys/param.h
configure:39878: result: yes
configure:39893: checking for getcwd
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for getegid
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for geteuid
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for getgid
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for getuid
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for mempcpy
configure:39893: result: no
configure:39893: checking for munmap
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for stpcpy
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:288:6: warning: incompatible redeclaration of library function 'stpcpy'
char stpcpy ();
^
conftest.c:288:6: note: 'stpcpy' is a builtin with type 'char *(char *, const char *)'
1 warning generated.
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for strcasecmp
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:289:6: warning: incompatible redeclaration of library function 'strcasecmp'
char strcasecmp ();
^
conftest.c:289:6: note: 'strcasecmp' is a builtin with type 'int (const char *, const char *)'
1 warning generated.
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for strdup
configure:39893: result: yes
configure:39893: checking for strtoul
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for tsearch
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39893: $? = 0
configure:39893: result: yes
configure:39893: checking for argz_count
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"_argz_count", referenced from:
_main in conftest-8bZa5Y.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:39893: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| /* end confdefs.h. */
| /* Define argz_count to an innocuous variant, in case <limits.h> declares argz_count.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define argz_count innocuous_argz_count
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char argz_count (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef argz_count
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char argz_count ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_argz_count || defined __stub___argz_count
| choke me
| #endif
|
| int
| main ()
| {
| return argz_count ();
| ;
| return 0;
| }
configure:39893: result: no
configure:39893: checking for argz_stringify
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"_argz_stringify", referenced from:
_main in conftest-Gfuxi3.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:39893: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| /* end confdefs.h. */
| /* Define argz_stringify to an innocuous variant, in case <limits.h> declares argz_stringify.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define argz_stringify innocuous_argz_stringify
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char argz_stringify (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef argz_stringify
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char argz_stringify ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_argz_stringify || defined __stub___argz_stringify
| choke me
| #endif
|
| int
| main ()
| {
| return argz_stringify ();
| ;
| return 0;
| }
configure:39893: result: no
configure:39893: checking for argz_next
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"_argz_next", referenced from:
_main in conftest-Sej3Bx.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:39893: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| /* end confdefs.h. */
| /* Define argz_next to an innocuous variant, in case <limits.h> declares argz_next.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define argz_next innocuous_argz_next
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char argz_next (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef argz_next
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char argz_next ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_argz_next || defined __stub___argz_next
| choke me
| #endif
|
| int
| main ()
| {
| return argz_next ();
| ;
| return 0;
| }
configure:39893: result: no
configure:39893: checking for __fsetlocking
configure:39893: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"___fsetlocking", referenced from:
_main in conftest-LUA70R.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:39893: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| /* end confdefs.h. */
| /* Define __fsetlocking to an innocuous variant, in case <limits.h> declares __fsetlocking.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define __fsetlocking innocuous___fsetlocking
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char __fsetlocking (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef __fsetlocking
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char __fsetlocking ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub___fsetlocking || defined __stub_____fsetlocking
| choke me
| #endif
|
| int
| main ()
| {
| return __fsetlocking ();
| ;
| return 0;
| }
configure:39893: result: no
configure:39904: checking whether feof_unlocked is declared
configure:39932: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:39932: $? = 0
configure:39939: result: yes
configure:39953: checking whether fgets_unlocked is declared
configure:39981: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:285:22: error: use of undeclared identifier 'fgets_unlocked'
char *p = (char *) fgets_unlocked;
^
1 error generated.
configure:39981: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| #ifndef fgets_unlocked
| char *p = (char *) fgets_unlocked;
| #endif
|
| ;
| return 0;
| }
configure:39988: result: no
configure:40031: checking for iconv
configure:40101: result: yes
configure:40122: checking for iconv declaration
configure:40170: result:
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
configure:40181: checking for NL_LOCALE_NAME macro
configure:40206: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:287:24: warning: implicit declaration of function '_NL_LOCALE_NAME' is invalid in C99 [-Wimplicit-function-declaration]
char* cs = nl_langinfo(_NL_LOCALE_NAME(LC_MESSAGES));
^
1 warning generated.
Undefined symbols for architecture x86_64:
"__NL_LOCALE_NAME", referenced from:
_main in conftest-u8dQYn.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:40206: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| /* end confdefs.h. */
| #include <langinfo.h>
| #include <locale.h>
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| char* cs = nl_langinfo(_NL_LOCALE_NAME(LC_MESSAGES));
| ;
| return 0;
| }
configure:40215: result: no
configure:40227: checking for bison
configure:40243: found /usr/bin/bison
configure:40254: result: bison
configure:40268: checking version of bison
configure:40277: result: 2.3, ok
configure:40285: checking for long long int
configure:40316: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40316: $? = 0
configure:40324: result: yes
configure:40333: checking for long double
configure:40373: result: yes
configure:40377: checking for wchar_t
configure:40402: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:40402: $? = 0
configure:40409: result: yes
configure:40418: checking for wint_t
configure:40443: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:40443: $? = 0
configure:40450: result: yes
configure:40461: checking for intmax_t
configure:40495: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:40495: $? = 0
configure:40502: result: yes
configure:40512: checking whether printf() supports POSIX/XSI format strings
configure:40553: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40553: $? = 0
configure:40553: ./conftest
configure:40553: $? = 0
configure:40564: result: yes
configure:40575: checking whether we are using the GNU C Library 2.1 or newer
conftest.c:280:10: fatal error: 'features.h' file not found
#include <features.h>
^
1 error generated.
configure:40602: result: no
configure:40611: checking for stdint.h
configure:40611: result: yes
configure:40621: checking for SIZE_MAX
configure:40703: result: yes
configure:40718: checking for stdint.h
configure:40718: result: yes
configure:40730: checking for CFPreferencesCopyAppValue
configure:40756: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv -Wl,-framework -Wl,CoreFoundation >&5
configure:40756: $? = 0
configure:40765: result: yes
configure:40772: checking for CFLocaleCopyCurrent
configure:40798: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv -Wl,-framework -Wl,CoreFoundation >&5
configure:40798: $? = 0
configure:40807: result: yes
configure:40825: checking for ptrdiff_t
configure:40825: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:40825: $? = 0
configure:40825: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:319:24: error: expected expression
if (sizeof ((ptrdiff_t)))
^
1 error generated.
configure:40825: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((ptrdiff_t)))
| return 0;
| ;
| return 0;
| }
configure:40825: result: yes
configure:40838: checking stddef.h usability
configure:40838: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:40838: $? = 0
configure:40838: result: yes
configure:40838: checking stddef.h presence
configure:40838: cc -E -I/usr/local/include conftest.c
configure:40838: $? = 0
configure:40838: result: yes
configure:40838: checking for stddef.h
configure:40838: result: yes
configure:40838: checking for stdlib.h
configure:40838: result: yes
configure:40838: checking for string.h
configure:40838: result: yes
configure:40851: checking for asprintf
configure:40851: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:320:18: warning: format string missing [-Wformat]
return asprintf ();
~~~~~~~~ ^
1 warning generated.
configure:40851: $? = 0
configure:40851: result: yes
configure:40851: checking for fwprintf
configure:40851: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40851: $? = 0
configure:40851: result: yes
configure:40851: checking for putenv
configure:40851: result: yes
configure:40851: checking for setenv
configure:40851: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40851: $? = 0
configure:40851: result: yes
configure:40851: checking for setlocale
configure:40851: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40851: $? = 0
configure:40851: result: yes
configure:40851: checking for snprintf
configure:40851: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:314:6: warning: incompatible redeclaration of library function 'snprintf'
char snprintf ();
^
conftest.c:314:6: note: 'snprintf' is a builtin with type 'int (char *, unsigned long, const char *, ...)'
1 warning generated.
configure:40851: $? = 0
configure:40851: result: yes
configure:40851: checking for wcslen
configure:40851: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40851: $? = 0
configure:40851: result: yes
configure:40862: checking whether _snprintf is declared
configure:40890: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:307:22: error: use of undeclared identifier '_snprintf'
char *p = (char *) _snprintf;
^
1 error generated.
configure:40890: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_ASPRINTF 1
| #define HAVE_FWPRINTF 1
| #define HAVE_PUTENV 1
| #define HAVE_SETENV 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SNPRINTF 1
| #define HAVE_WCSLEN 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| #ifndef _snprintf
| char *p = (char *) _snprintf;
| #endif
|
| ;
| return 0;
| }
configure:40897: result: no
configure:40911: checking whether _snwprintf is declared
configure:40939: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:308:22: error: use of undeclared identifier '_snwprintf'
char *p = (char *) _snwprintf;
^
1 error generated.
configure:40939: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_ASPRINTF 1
| #define HAVE_FWPRINTF 1
| #define HAVE_PUTENV 1
| #define HAVE_SETENV 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SNPRINTF 1
| #define HAVE_WCSLEN 1
| #define HAVE_DECL__SNPRINTF 0
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| #ifndef _snwprintf
| char *p = (char *) _snwprintf;
| #endif
|
| ;
| return 0;
| }
configure:40946: result: no
configure:40961: checking whether getc_unlocked is declared
configure:40989: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:40989: $? = 0
configure:40996: result: yes
configure:41035: checking for nl_langinfo and CODESET
configure:41068: result: yes
configure:41077: checking for LC_MESSAGES
configure:41101: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:41101: $? = 0
configure:41109: result: yes
configure:41133: checking for shared library run path origin
configure:41146: result: done
configure:41178: checking for CFPreferencesCopyAppValue
configure:41213: result: yes
configure:41220: checking for CFLocaleCopyCurrent
configure:41255: result: yes
configure:41290: checking whether included gettext is requested
configure:41300: result: no
configure:41323: checking for GNU gettext in libc
configure:41351: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:300:10: fatal error: 'libintl.h' file not found
#include <libintl.h>
^
1 error generated.
configure:41351: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG1PL 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_ASPRINTF 1
| #define HAVE_FWPRINTF 1
| #define HAVE_PUTENV 1
| #define HAVE_SETENV 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SNPRINTF 1
| #define HAVE_WCSLEN 1
| #define HAVE_DECL__SNPRINTF 0
| #define HAVE_DECL__SNWPRINTF 0
| #define HAVE_DECL_GETC_UNLOCKED 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_LC_MESSAGES 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| /* end confdefs.h. */
| #include <libintl.h>
|
| extern int _nl_msg_cat_cntr;
| extern int *_nl_domain_bindings;
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| bindtextdomain ("", "");
| return * gettext ("") + * ngettext ("", "", 0) + _nl_msg_cat_cntr + *_nl_domain_bindings
| ;
| return 0;
| }
configure:41360: result: no
configure:41743: checking for GNU gettext in libintl
configure:41779: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv -lintl >&5
conftest.c:300:10: fatal error: 'libintl.h' file not found
#include <libintl.h>
^
1 error generated.
configure:41779: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
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