chris-allan

# -*- coding: utf-8 -*-
#
# Copyright (c) 2018 Glencoe Software, Inc. All rights reserved.
#
# This program and the accompanying materials
# are licensed and made available under the terms and conditions of the BSD
# License which accompanies this distribution.  The full text of the license
# may be found at http://opensource.org/licenses/bsd-license.php
#
# THE PROGRAM IS DISTRIBUTED UNDER THE BSD LICENSE ON AN "AS IS" BASIS,

chris-allan

#!/bin/bash

# Prints out OMERO binary repository paths for data associated with a Plate
#
# Copyright (C) 2018 Glencoe Software, Inc.
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are met:
# 1. Redistributions of source code must retain the above copyright notice, this

chris-allan

#!/usr/bin/env python
# encoding: utf-8
"""
Tests performance of various annotation queries.

Copyright (C) 2015 Glencoe Software, Inc.
All rights reserved.

Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:

chris-allan

#!/usr/bin/env jython
# encoding: utf-8
"""
Dumps a basic set of metadata for an image file using Bio-Formats.

Copyright (C) 2014 Glencoe Software, Inc.
All rights reserved.

Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:

chris-allan

"""
"""

import sys

from setuptools import setup, find_packages
from setuptools.command.test import test as TestCommand


class PyTest(TestCommand):

chris-allan

from flask import Flask
from flask.ext.mongoengine import MongoEngine
from flask.ext.security import Security, MongoEngineUserDatastore, \
    UserMixin, RoleMixin, login_required
from flask.ext.principal import Permission, RoleNeed


# Create app
app = Flask(__name__)
app.config['DEBUG'] = True

chris-allan

from flask import Flask
from flask.ext.mongoengine import MongoEngine
from flask.ext.security import Security, MongoEngineUserDatastore, \
    UserMixin, RoleMixin, login_required
from flask.ext.principal import Principal


# Create app
app = Flask(__name__)
app.config['DEBUG'] = True

chris-allan

#!/usr/bin/env python
# encoding: utf-8
"""
Create OMERO annotations on an Image from the command line
 
Copyright (C) 2014 Glencoe Software, Inc.
All rights reserved.
 
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:

chris-allan

apply plugin: 'application'
apply plugin: 'java'
apply plugin: 'eclipse'

mainClassName = 'ome.formats.importer.cli.CommandLineImporter'

def javaOpts = [
    '-Dlog4j.configuration=log4j-cli.properties',
    '-Xmx512M'
]

chris-allan

apply plugin: 'application'
apply plugin: 'java'

mainClassName = 'ome.formats.importer.cli.CommandLineImporter'

def javaOpts = [
    '-Dlog4j.configuration=log4j-cli.properties',
    '-Xmx512M'
]