- Join the mgibio Slack. Ask any user to invite you using your wustl address, or email c.a.miller@wustl.edu. Excellent place to post questions about anything and get answers. Useful channels include #bfx-workshop, #analysis-workflows, #cancergenomics, and #docker
- Get compute1 access set up. This requires a ticket to the RIS Servicedesk requesting to be added to the appropriate compute and storage groups
- VPN access Connect to msvpn.wusm.wustl.edu through Cisco AnyConnect. Use WUSTL key log in and submit request at https://it.wustl.edu/items/connect/
- Set up compute1 config files (Need a link for this - env variables, etc)
- Sign up for the bfx_workshop get on the email list and check out past lectures and tutorials on github. First session of the month is "office hours" where you can get expert answers to generic bioinformatics questions.
- Bioinformatics Workshop Intro - reference for a lot of general compute/docker stuff and links
- RIS Guide to the compute1 cluster
- Tutorial on submitting jobs on the cluster
- Analysis workflows CWL definitions for core genomics pipelines - Shared resource
- How to run a cromwell workflow