calkan

1 - Create a *private* GitHub/Bitbucket or similar git repo. Here I assume the repo is:

	https://github.com/calkan/bash_history.git

2 - Create .history directory and initialize it for the repo:

	mkdir $HOME/.history
	cd $HOME/.history
	git init
	touch README.md 

deannachurch

##Mar 13, 2015
##Some 'date-names' are aliases and map to more than one gene
#symbol date name
SEPT1 1-Sep
SEPT2	2-Sep
SEPT3	3-Sep
SEPT4	4-Sep
SEPT5	5-Sep
SEPT6	6-Sep
SEPT7	7-Sep

nathanhaigh

#!/bin/bash
# Usage: deinterleave_fastq.sh < interleaved.fastq f.fastq r.fastq [compress]
# 
# Deinterleaves a FASTQ file of paired reads into two FASTQ
# files specified on the command line. Optionally GZip compresses the output
# FASTQ files using pigz if the 3rd command line argument is the word "compress"
# 
# Can deinterleave 100 million paired reads (200 million total
# reads; a 43Gbyte file), in memory (/dev/shm), in 4m15s (255s)
#