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@chrzyki
Created February 12, 2019 07:22
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BEAST trial runs
126 6:makh1264,lobe1242,tswe1238,lozi1239,sout2807,tswa1253,
Fatal exception: 1704
java.lang.ArrayIndexOutOfBoundsException: 1704
at beast.evolution.tree.Tree.storeNodes(Tree.java:819)
at beast.evolution.tree.Tree.store(Tree.java:799)
at beast.evolution.tree.PrunedTree.insureStore(PrunedTree.java:572)
at beast.evolution.tree.PrunedTree.rq(PrunedTree.java:453)
at beast.evolution.tree.PrunedTree.requiresRecalculation(PrunedTree.java:374)
at beast.core.CalculationNode.checkDirtiness(CalculationNode.java:44)
at beast.core.State.checkCalculationNodesDirtiness(State.java:301)
at beast.core.MCMC.propagateState(MCMC.java:493)
at beast.core.MCMC.doLoop(MCMC.java:383)
at beast.core.MCMC.run(MCMC.java:353)
at beast.app.BeastMCMC.run(BeastMCMC.java:357)
at beast.app.beastapp.BeastMain.<init>(BeastMain.java:113)
at beast.app.beastapp.BeastMain.main(BeastMain.java:659)
Fatal exception: 1704
java.lang.RuntimeException: An error was encounted. Terminating BEAST
at beast.app.util.ErrorLogHandler.publish(ErrorLogHandler.java:30)
at java.util.logging.Logger.log(Logger.java:738)
at java.util.logging.Logger.doLog(Logger.java:765)
at java.util.logging.Logger.log(Logger.java:788)
at java.util.logging.Logger.severe(Logger.java:1463)
at beast.app.beastapp.BeastMain.<init>(BeastMain.java:177)
at beast.app.beastapp.BeastMain.main(BeastMain.java:659)
--------------------------------------------------------------------------------
560 3:bask1236,dorz1235,male1284,
Fatal exception: 1705
java.lang.ArrayIndexOutOfBoundsException: 1705
at beast.evolution.tree.Tree.storeNodes(Tree.java:819)
at beast.evolution.tree.Tree.store(Tree.java:799)
at beast.evolution.tree.PrunedTree.insureStore(PrunedTree.java:572)
at beast.evolution.tree.PrunedTree.rq(PrunedTree.java:453)
at beast.evolution.tree.PrunedTree.requiresRecalculation(PrunedTree.java:374)
at beast.core.CalculationNode.checkDirtiness(CalculationNode.java:44)
at beast.core.State.checkCalculationNodesDirtiness(State.java:301)
at beast.core.MCMC.propagateState(MCMC.java:493)
at beast.core.MCMC.doLoop(MCMC.java:383)
at beast.core.MCMC.run(MCMC.java:353)
at beast.app.BeastMCMC.run(BeastMCMC.java:357)
at beast.app.beastapp.BeastMain.<init>(BeastMain.java:113)
at beast.app.beastapp.BeastMain.main(BeastMain.java:659)
--------------------------------------------------------------------------------
531 3:meen1242,suri1267,didi1258,
Fatal exception: 1705
java.lang.ArrayIndexOutOfBoundsException: 1705
at beast.math.distributions.MultiMonophyleticConstraint.isMonoJHNonBinary(MultiMonophyleticConstraint.java:337)
at beast.math.distributions.MultiMonophyleticConstraint.calculateLogP(MultiMonophyleticConstraint.java:184)
at beast.math.distributions.MultiMRCAPriors.calculateLogP(MultiMRCAPriors.java:62)
at beast.core.util.CompoundDistribution.calculateLogP(CompoundDistribution.java:114)
at beast.core.util.CompoundDistribution.calculateLogP(CompoundDistribution.java:114)
at beast.core.MCMC.propagateState(MCMC.java:496)
at beast.core.MCMC.doLoop(MCMC.java:383)
at beast.core.MCMC.run(MCMC.java:353)
at beast.app.BeastMCMC.run(BeastMCMC.java:357)
at beast.app.beastapp.BeastMain.<init>(BeastMain.java:113)
at beast.app.beastapp.BeastMain.main(BeastMain.java:659)
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