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Last active August 29, 2015 14:11
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readme.csv
NMDS1 NMDS2 SampleID BarcodeSequence Day Density LinkerPrimerSequence Treatment Description
-0.546251256198277 -0.152581884895409 cont.PS.1.28 TCAAGGAACC 1 1.6849 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.28
0.18028932617048 -0.0221767242910232 cont.PS.3.9 TCAGAGCACA 3 1.7373 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.9
-0.301378021347966 -0.0171898241417064 cont.PS.3.21 TCAGCACATC 3 1.686 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.21
0.136781082781387 -0.00730037316789761 13C.PS.3.24 TCACTCGTGA 3 1.7067 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.24
0.104705100588288 -0.0219348907940375 13C.PS.3.22 TCAACCTACG 3 1.7166 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.22
0.169911004916625 0.0537420423531419 13C.PS.14.15 TCACTCCAGA 14 1.7111 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.15
0.146238528367307 0.0194379347158798 13C.PS.7.18 TCACACTGAC 7 1.7122 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.18
0.167301307214716 -0.0120409677882634 cont.PS.1.22 TCACAGGAGT 1 1.7078 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.22
0.173781959633247 0.0138155903725292 cont.PS.30.15 TCACACGAGA 30 1.7122 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.15
0.0301658495567411 -0.0344102802285604 cont.PS.1.17 TCAATTGCGC 1 1.7286 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.17
0.142507044136864 -0.0702783780768851 cont.PS.30.9 TCAAGCAACG 30 1.7395 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.9
0.116027754819469 -0.00643480521867909 13C.PS.3.23 TCACTCGTCT 3 1.7111 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.23
-0.184132813343302 0.0728502664242928 13C.PS.14.20 TCACTCCTCA 14 1.6892 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.20
0.102407106026514 -0.0738874672960184 13C.PS.3.12 TCAAGCTAGG 3 1.7526 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.12
0.148547455699261 -0.0251080213977427 cont.PS.1.21 TCACACTCTC 1 1.7133 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.21
0.105289152710769 0.0596750278419047 13X.PS.7.16 TCAGACTGTC 7 1.7013 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.16
-0.00493667926646723 -0.0923660834291614 13X.PS.3.3 TCAAGGTTGG 3 1.7504 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.3
-0.0458773261966161 -0.150238202811039 13X.PS.1.9 TCACGTTGGT 1 1.7351 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.9
0.102430873274002 -0.0578420157547294 cont.PS.3.6 TCAGAGACTG 3 1.7515 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.6
0.0622652132922956 -0.0200704956413902 13C.PS.3.15 TCACGTAGGA 3 1.7494 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.15
0.0974149139096309 0.00787515917676296 cont.PS.14.10 TCACGTCAAC 14 1.7297 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.10
0.16092734654672 0.0388655571499622 13C.PS.7.17 TCACACTCTC 7 1.7133 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.17
0.168996255804008 0.0263623428886635 13C.PS.7.16 TCACACTCAG 7 1.7144 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.16
0.090693081503863 0.0161692748300845 cont.PS.14.9 TCACGATCCA 14 1.7362 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.9
0.141137996560637 0.200612865202335 13C.PS.14.11 TCACTCACTC 14 1.7253 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.11
0.0597733328146051 -0.044008741664253 cont.PS.1.15 TCAAGCTACC 1 1.7373 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.15
0.163477267382723 -0.130241632463437 13X.PS.7.7 TCAACGATGG 7 1.7417 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.7
-0.0776173825388598 0.168413513389038 13X.PS.7.23 TCACGAGAAC 7 1.6739 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.23
0.0513979545816981 0.0155467901030912 cont.PS.7.10 TCACAGGTCT 7 1.7384 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.10
0.194326461292056 -0.219213068414641 13X.PS.7.9 TCACGACAAG 7 1.7297 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.9
0.069817495460641 0.00529670888159082 cont.PS.14.8 TCACGACAAG 14 1.7384 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.8
0.0392690225785924 0.0163601830535166 cont.PS.7.9 TCACAGGAGT 7 1.7428 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.9
0.160698955249652 0.0347763518961474 cont.PS.7.17 TCACCAACCA 7 1.7089 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.17
-0.36808067108914 -0.0108372900672833 13C.PS.30.23 TCAACGATGG 30 1.675 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.23
0.163987546338804 -0.0197854034480143 cont.PS.3.13 TCAGAGGACT 3 1.7188 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.13
0.117454368954595 -0.0457182692094223 cont.PS.30.7 TCAACCATCG 30 1.7526 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.7
0.141376243763768 -0.0556080153135939 cont.PS.3.7 TCAGAGAGAG 3 1.745 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.7
0.0978258694269381 -0.00954941840328428 cont.PS.1.19 TCACAGCTCA 1 1.7188 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.19
0.188986209691641 -0.0257744269886505 cont.PS.3.16 TCAGCACTTG 3 1.7056 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.16
0.148788081533319 -0.0908564582927125 13X.PS.30.17 TCAGACGAGT 30 1.7209 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.17
0.000101080405099094 -0.0626069367474919 13X.PS.3.4 TCACACACTG 3 1.7461 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.4
0.090472800817524 0.031604649188167 13X.PS.7.4 TCACACTCAG 7 1.7548 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.4
0.0871266026519243 0.0423287254191132 13C.PS.7.15 TCACACGTGT 7 1.7209 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.15
0.0398750940872278 0.00901075213791432 cont.PS.7.28 TCAGACGTGA 7 1.6641 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.28
0.151125402195712 0.034473518949954 cont.PS.14.13 TCACTCTCAC 14 1.7166 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.13
0.222418315405362 -0.0468489065552762 cont.PS.3.15 TCAGCACAAG 3 1.7111 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.15
-0.0104098063784787 0.00986468607915618 13X.PS.1.5 TCACACCACA 1 1.7494 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.5
0.0810502420585113 -0.0404524140739414 13X.PS.3.15 TCACTGTGAC 3 1.7122 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.15
-0.22424326973413 0.10651952573847 13X.PS.1.19 TCACTCCTGT 1 1.7013 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.19
0.0043968095559099 -0.021584964167496 13X.PS.3.6 TCACGATGGA 3 1.7417 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.6
0.157089969917728 -0.051308206043956 13X.PS.7.14 TCAGACTCTG 7 1.71 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.14
0.13872397070136 -0.0542891936669394 13C.PS.3.25 TCAACGGCAA 3 1.7013 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.25
0.0478305285581851 -0.0131530144193041 13C.PS.3.14 TCAATTGGCC 3 1.7461 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.14
0.0428595466775316 -0.0469810586577426 cont.PS.1.13 TCAACGAACG 1 1.7494 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.13
0.134482755006211 -0.0385145343174243 cont.PS.3.18 TCAGCAGATG 3 1.698 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.18
0.0154914683579961 -0.0430550881343563 cont.PS.1.11 TCAACCAACC 1 1.7548 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.11
0.169364078329856 0.0713669014297967 13C.PS.14.14 TCACTCCACT 14 1.7144 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.14
0.100820641983964 -0.0323483038525286 cont.PS.1.14 TCAACGTTCG 1 1.7417 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.14
0.133561602734055 0.112525008518614 13C.PS.14.12 TCACTCAGAC 14 1.7209 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.12
0.140610187179179 0.0426181714169569 13C.PS.30.7 TCAACCATGC 30 1.7439 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.7
0.158790663963631 -0.0564496239517808 cont.PS.30.10 TCAAGCTTCG 30 1.7362 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.10
0.173139918080863 -0.0148988269847298 cont.PS.3.17 TCAGCAGAAC 3 1.7013 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.17
0.098664597229583 0.210113551005357 13C.PS.30.11 TCACGACTTG 30 1.7242 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.11
0.196493869588583 0.0178856760278071 cont.PS.30.16 TCACTGAGAG 30 1.7089 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.16
0.106763901479599 -0.0443934460154893 cont.PS.1.20 TCAACCAAGG 1 1.7177 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.20
0.203736983947657 0.229698931095198 13C.PS.30.8 TCACGACAAG 30 1.7406 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.8
0.169640585506348 -0.0195568092636641 cont.PS.30.14 TCAATTGCCG 30 1.7155 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.14
0.168001167608278 0.0359671299126377 cont.PS.14.15 TCACTGTCAG 14 1.7067 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.15
0.0147129363077894 0.0405821281893285 cont.PS.14.6 TCAGAGAGTC 14 1.745 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.6
0.145363527337847 0.00805738789037702 cont.PS.7.16 TCACAGTGTC 7 1.7144 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.16
0.00326753881314808 0.00652796388841908 cont.PS.7.27 TCAGACAGTG 7 1.6674 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.27
-0.0733328724847302 0.0278978719077242 cont.PS.14.25 TCACTCTCTG 14 1.663 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.25
0.0738714509392027 0.0068320404201206 cont.PS.7.12 TCACAGGTGA 7 1.7286 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.12
0.184590626015184 -0.15686155567224 13X.PS.7.13 TCACTGGTGT 7 1.7144 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.13
0.184117643006466 0.0479298244996097 cont.PS.14.14 TCACTGCACA 14 1.7122 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.14
-0.332189551280657 -0.0686117091858508 13C.PS.3.34 TCACACCTCT 3 1.6707 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.34
0.0917447297369933 -0.0147414748143097 13C.PS.3.19 TCACACCAGT 3 1.7264 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.19
0.113594788740817 -0.0301336464370158 cont.PS.30.8 TCAACGATCC 30 1.7461 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.8
0.0547266099191697 -0.0362613187633202 cont.PS.1.16 TCAAGGTACG 1 1.733 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.16
0.158274307435696 -0.0156188296135175 cont.PS.30.12 TCAAGCGGTA 30 1.7264 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.12
-0.0648453833078623 0.0529880762361437 13C.PS.30.16 TCACTGGAGA 30 1.7045 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.16
-0.0130564148698624 -0.0922849556815639 13X.PS.1.3 TCAAGCCGTT 1 1.7515 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.3
0.0684500693854989 0.0657299866599607 13X.PS.30.22 TCAGCATCGT 30 1.7002 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.22
0.146425467116171 0.0600750976867291 13C.PS.14.16 TCAGACCAGA 14 1.7078 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.16
0.0874433898595407 -0.00969696232732529 cont.PS.7.14 TCACAGTCTG 7 1.7231 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.14
0.0419806715167086 0.0130319111858807 cont.PS.14.7 TCAGAGGTGT 14 1.7428 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.7
0.0726869521237663 0.123047910433239 13C.PS.30.12 TCACGAGAAC 30 1.7209 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.12
0.124490690632198 -0.0229057025191783 cont.PS.3.11 TCAGAGCTCT 3 1.7286 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.11
-0.00920191672995467 0.100068415785059 13X.PS.3.18 TCAGACACTC 3 1.7002 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.18
-0.11722049897064 0.011149993118301 13C.PS.7.27 TCACAGCTGT 7 1.6707 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.27
0.0795104330603369 0.0793594472203989 13X.PS.7.5 TCACAGGACA 7 1.7515 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.5
0.101008166384922 -0.0133997703593315 cont.PS.3.8 TCAGAGAGTC 3 1.7406 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.8
0.199012875441317 0.311119910623611 13C.PS.30.9 TCACGACATC 30 1.7341 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.9
0.120999022240021 -0.0105075645631182 cont.PS.7.15 TCACAGTGAG 7 1.7188 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.15
0.00634329477977195 -0.183019603032437 13X.PS.1.14 TCACTCAGAC 1 1.7144 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.14
-0.238149010594704 0.0838103755265276 13C.PS.14.21 TCACTCCTGT 14 1.686 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.21
-0.413096374230898 -0.0864003633981863 cont.PS.1.27 TCAAGCATCC 1 1.6903 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.27
-0.578407017666256 0.0103332860303136 13C.PS.30.21 TCACGATCCA 30 1.6838 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.21
0.000617048548026659 0.0696706192306482 13C.PS.14.19 TCAGACGACA 14 1.6936 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.19
0.0612704123977519 0.0727145598849368 13X.PS.14.23 TCACTCTCAC 14 1.7035 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.23
-0.474796636738873 -0.00587996851665895 cont.PS.7.22 TCACGTGTTG 7 1.6882 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.22
-0.211149127815413 0.149030270390334 13X.PS.7.22 TCACGACTTG 7 1.6772 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.22
-0.240030605212398 -0.00978656485394319 cont.PS.7.25 TCACTGAGTC 7 1.6772 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.25
0.0403720130115286 0.0707205444335045 13X.PS.3.17 TCAGACACAG 3 1.7056 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.17
-0.132121949320154 -0.0152892669182833 cont.PS.1.26 TCAACGCCAT 1 1.6914 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.26
-0.280750715482484 0.151978689047248 13X.PS.7.21 TCACGACTAC 7 1.6816 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.21
-0.00573217716220656 0.0937977452827 13X.PS.14.26 TCACTCTGTC 14 1.6892 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.26
0.100985692691968 0.0455430238969332 13C.PS.14.18 TCAGACCTGT 14 1.6969 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.18
-0.248777813701895 0.0492810746568523 cont.PS.30.21 TCACTGCTGA 30 1.6882 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.21
-0.240258913487474 0.0593077250779987 13C.PS.14.22 TCACTCGACA 14 1.6816 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.22
-0.284312996658547 0.0586732025935835 13C.PS.7.22 TCACAGAGAC 7 1.6903 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.22
0.149087520549386 -0.0274118804756519 cont.PS.3.12 TCAGAGCTGA 3 1.7231 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.12
0.150015452842122 -0.0794476236505031 13X.PS.30.11 TCACGAGTAG 30 1.7483 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.11
-0.093774362571641 0.103418364416968 13X.PS.14.28 TCACAGAGAC 14 1.6827 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.28
0.132028154894981 0.0557097579335875 13X.PS.7.15 TCAGACTGAG 7 1.7056 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.15
-0.0306640571058509 0.107910147432683 13X.PS.1.18 TCACTCCTCA 1 1.6991 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.18
0.0315755881660489 0.0254750314899012 13C.PS.7.20 TCACAGACAG 7 1.6969 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.20
0.144426618086003 -0.00413697524966142 cont.PS.30.13 TCAAGGCGTA 30 1.722 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.13
0.0937808765442682 0.0337436125473771 cont.PS.30.19 TCACTGCAGT 30 1.6969 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.19
-0.345701029056358 -0.10667786626643 cont.PS.1.30 TCAACGAAGC 1 1.6794 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.30
-0.0456448784653511 0.00631563792947729 13X.PS.1.6 TCACAGACAG 1 1.745 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.6
0.164853482238033 -0.0451443089132194 13X.PS.30.19 TCAGACGTGA 30 1.7133 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.19
0.173830996245171 -0.118193290855406 13X.PS.30.16 TCAGACGACA 30 1.7253 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.16
-0.0143424745698404 0.0462229809148771 13X.PS.30.25 TCAGACTCAC 30 1.6882 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.25
-0.525867567961227 0.0284132542509745 13X.PS.1.20 TCACAGACTC 1 1.6903 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.20
0.0236983597247799 -0.0599899336602816 13C.PS.3.16 TCAAGCTTGC 3 1.7384 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.16
0.0182814737043494 -0.0200367154918892 13X.PS.3.7 TCACGTACCA 3 1.7395 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.7
0.0822880477917826 0.0701668444898751 13C.PS.7.10 TCACACCTCT 7 1.7417 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.10
-0.0234612845538767 -0.0699415630692074 13X.PS.3.2 TCAAGCTTGC 3 1.7515 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.2
0.191861289211284 0.16085832309406 13C.PS.14.7 TCAACCGGTT 14 1.745 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.7
0.14158284328177 0.095026790447707 13C.PS.14.6 TCACAGTCAC 14 1.7515 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.6
-0.240478872595236 0.0339469611718191 13X.PS.3.20 TCACGTAGCT 3 1.6925 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.20
0.057512877222297 0.0434763271385531 13X.PS.1.17 TCACTCCAGA 1 1.7024 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.17
-0.285800759977778 -0.0135347459851334 cont.PS.30.25 TCACGAAGGT 30 1.6739 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.25
0.182866436888551 -0.0795538284900944 13X.PS.30.13 TCACGAGTTC 30 1.7384 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.13
0.145481743191631 -0.0891331773324889 13X.PS.30.9 TCACGAGATG 30 1.7559 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.9
0.158851836511153 -0.0337724735350195 cont.PS.3.10 TCAGAGCAGT 3 1.7319 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.10
0.0490975907810653 0.0194280571249692 cont.PS.7.7 TCACAGGACA 7 1.7504 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.7
-0.230768209663803 -0.00837387365571613 13C.PS.7.26 TCACAGCTCA 7 1.6761 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.26
0.118131880755224 0.154860752484358 13C.PS.7.12 TCACACGACT 7 1.733 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.12
0.114133098405802 -0.00219625849163387 cont.PS.14.11 TCACGTTCCT 14 1.7264 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.11
0.148615381917006 0.0118683551662294 cont.PS.7.18 TCACCAACGT 7 1.7089 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.18
-0.118158220170829 0.0297315870767897 cont.PS.14.24 TCACTCCAGA 14 1.6696 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.24
-0.339607488738281 0.0218505757010281 13X.PS.3.21 TCACGTGAAG 3 1.6892 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.21
0.0960995706666169 -0.0284655886654838 13C.PS.3.17 TCAAGGTTGG 3 1.7341 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.17
0.0386659622611844 0.0531065897769759 13C.PS.30.18 TCACTGGTGT 30 1.6958 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.18
-0.0126300014298449 0.121451351358837 13X.PS.30.26 TCACGATCCA 30 1.686 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.26
0.0411385815804837 -0.0752516020161543 13X.PS.1.15 TCACTCAGTG 1 1.71 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.15
-0.452508402588299 -0.145690099596264 cont.PS.1.29 TCAACCGCAT 1 1.6827 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.29
0.0917180352966634 0.104220499311862 13C.PS.30.6 TCACAGGACA 30 1.7494 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.6
-0.531187824824067 0.0199184189543464 13X.PS.1.21 TCACTCGACA 1 1.6849 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.21
0.117096207411615 0.0812110303134122 13C.PS.30.13 TCACGAGATG 30 1.7166 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.13
0.191949389547107 -0.0341233752227278 cont.PS.3.14 TCAGCAAGGT 3 1.7144 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.14
0.129759945002563 -0.0406656897967725 cont.PS.30.6 TCACAGCTGT 30 1.7614 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.6
0.0459436293606607 -0.00817248324053779 13C.PS.3.27 TCACTCTCTG 3 1.6947 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.27
0.115103209672193 0.0686618392456452 13C.PS.30.5 TCACACTCAG 30 1.7526 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.5
-0.281532627150383 -0.0349135556406424 13C.PS.3.31 TCAAGCGCAA 3 1.6827 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.31
0.0643740354968521 -0.00355480337081606 cont.PS.1.25 TCACGTGTTG 1 1.6969 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.25
0.0392251192297086 -0.0322957536967631 cont.PS.3.19 TCAGCAGTAG 3 1.6936 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.19
-0.573685836397953 -0.0191916948788394 cont.PS.30.24 TCACCAACGT 30 1.6794 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.24
0.0782465628991899 0.0713011988161103 13C.PS.30.15 TCACTGGACT 30 1.7078 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.15
0.0807100108944596 -0.00221118774196831 13C.PS.3.20 TCACAGACTC 3 1.7231 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.20
-0.0559705236000936 -0.00493027385125007 13C.PS.3.28 TCACTCTGAG 3 1.6903 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.28
0.142779237724466 0.0494253770536797 13C.PS.14.17 TCAGACCTCA 14 1.7024 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.17
0.145892345857723 0.025625039276072 cont.PS.30.18 TCACTGCACA 30 1.7002 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.18
0.133164005749768 0.00879013600751034 cont.PS.1.24 TCACGTGTAC 1 1.6991 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.24
0.108750681906416 0.258630531920094 13C.PS.30.10 TCACGACTAC 30 1.7319 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.10
-0.384700465774574 -0.141134775259523 13C.PS.3.33 TCAATTCCGG 3 1.6739 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.33
0.102800379710945 -0.0148637823723355 13C.PS.3.26 TCACTCTCAC 3 1.6969 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.26
0.0508261758783224 0.0289628931815674 13C.PS.3.13 TCAAGGTAGC 3 1.7494 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.13
-0.219763928775057 0.0567405706551499 13C.PS.14.23 TCACTCGAGT 14 1.6783 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.23
-0.00551434317783219 0.0566796686825266 cont.PS.30.20 TCACTGCTCT 30 1.6936 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.20
-0.201992498841532 -0.0262603398650117 13C.PS.3.29 TCACTCTGTC 3 1.6892 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.29
-0.0608699835590727 -0.0295578173394429 cont.PS.3.24 TCAGAGGTCA 3 1.6739 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.24
-0.594598095846152 0.00462210011245328 cont.PS.30.22 TCACAGCAGA 30 1.6838 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.22
-0.127585115122546 0.119344812367705 13C.PS.14.24 TCAATAGGCG 14 1.675 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.24
0.136869089513983 0.0860281513315025 13C.PS.14.13 TCACTCAGTG 14 1.7177 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.13
0.10833199058253 -0.0172434381098304 13C.PS.3.21 TCACAGTCTG 3 1.7198 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.21
-0.0856994615847014 -0.0232215099698109 cont.PS.3.25 TCAGAGGTGT 3 1.6696 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.25
0.165131209732095 -0.0102597104442484 cont.PS.1.23 TCACGTGATC 1 1.7045 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.23
0.112301002255473 0.00747490207034774 13X.PS.30.20 TCAGCTACCA 30 1.71 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.20
0.158546108913314 -0.10383517340692 13X.PS.30.10 TCAGACCACT 30 1.7515 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.10
0.154927052345175 -0.119532166741063 13X.PS.30.12 TCAGACCAGA 30 1.7428 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.12
0.164567009411399 -0.11294511560975 13X.PS.14.15 TCAACGGCAA 14 1.7351 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.15
0.023455454550576 -0.0259954210127558 13X.PS.1.4 TCAAGGATGC 1 1.7494 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.4
0.134650926384431 -0.0790186747942812 13X.PS.14.17 TCAAGGCCAA 14 1.7253 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.17
0.120160923579802 -0.117501874879028 13X.PS.14.10 TCAAGCTAGG 14 1.7581 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.10
-0.0145947268331813 -0.00224159006226115 13X.PS.3.5 TCACGATGCT 3 1.7461 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.5
0.145454992626726 -0.238454668634242 13X.PS.7.11 TCACTGGAGA 7 1.7209 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.11
-0.317229266221079 -0.0835462174860251 cont.PS.1.31 TCAACGTTGC 1 1.675 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.31
0.0653757761441539 -0.141472979642011 13X.PS.3.14 TCACTGTCTC 3 1.7166 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.14
0.0759679575698923 0.0584849883566376 13X.PS.14.22 TCACTCGTGA 14 1.7089 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.22
0.113083825735541 0.0181858114702851 13X.PS.14.21 TCACTCGTCT 14 1.7111 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.21
0.137243488833183 -0.0881672971530599 13X.PS.14.13 TCAACCTACG 14 1.745 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.13
0.168066717878022 -0.0902137429462898 13X.PS.30.18 TCAGACGTCT 30 1.7177 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.18
-0.0273214408950935 -0.111384033703333 13X.PS.1.2 TCAACGCGTT 1 1.7526 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.2
0.0577014070499402 -0.207798867901055 13X.PS.3.11 TCACGTCAAC 3 1.7264 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.11
0.0127698893821079 -0.0375527821002933 13X.PS.3.8 TCACGTACGT 3 1.7362 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.8
-0.24087477680996 0.169173470764525 13X.PS.7.20 TCAGACAGTG 7 1.6849 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.20
-0.00440621855573564 0.160839335807373 13X.PS.7.18 TCACTGTCAG 7 1.6925 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.18
0.180793500967023 -0.191163593427077 13X.PS.7.12 TCACTGGTCA 7 1.7177 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.12
-0.0577377432936241 0.0666925549360463 13X.PS.14.29 TCACAGTGAG 14 1.6794 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.29
0.164198512097699 0.0362230199540362 cont.PS.30.17 TCACTGAGTC 30 1.7045 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.17
0.143179798192791 -0.0999101542681087 13X.PS.14.16 TCAAGCGCAA 14 1.7308 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.16
-0.030347928059543 -0.283733982254957 13X.PS.1.12 TCACTCACAG 1 1.7231 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.12
-0.0810709768823041 0.101556860279718 13X.PS.3.19 TCACGTCTTC 3 1.6958 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.19
0.0491490827377141 -0.236544086975644 13X.PS.3.12 TCACGTCATG 3 1.7253 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.12
0.0916318596678369 -0.173319035160354 13X.PS.7.10 TCACGACATC 7 1.7264 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.10
0.196843770776191 -0.192494971236164 13X.PS.7.8 TCAAGCAAGC 7 1.7362 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.8
-0.126045354242744 0.171831740585599 13X.PS.7.19 TCACTCACTC 7 1.6882 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.19
-0.09313403252074 0.0138190669287818 cont.PS.7.26 TCACTGGTGT 7 1.6729 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.26
-0.329050232701837 0.00497548000306696 cont.PS.14.22 TCACGTCATG 14 1.6761 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.22
0.116070706256691 -0.0442389165395096 13X.PS.7.6 TCAACCATGC 7 1.745 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.7.6
-0.260146532096073 0.0318737293374061 cont.PS.7.21 TCACGTAGGA 7 1.6947 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.21
-0.510396850092349 0.0190033787096364 cont.PS.14.21 TCACGATCGT 14 1.6827 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.21
0.0530894296925486 -0.180874546802384 13X.PS.3.10 TCACGTAGGA 3 1.7308 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.10
-0.0342730331349608 -0.0290543478872284 13X.PS.1.7 TCACAGTCAC 1 1.7417 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.7
0.104508173538996 0.0692156694756556 13C.PS.7.8 TCACACCAGT 7 1.7504 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.8
-0.321376112085887 0.0442853037524548 cont.PS.14.19 TCAGAGTCAG 14 1.6903 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.19
0.0633159687724316 0.0569572046710489 cont.PS.14.17 TCAGACTCAC 14 1.698 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.17
0.172197726216397 0.310761048132684 13C.PS.14.10 TCAAGGATGC 14 1.7297 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.10
-0.41436745205044 -0.00939764452647496 cont.PS.7.24 TCACTCGTGA 7 1.6805 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.24
0.0731866695039258 0.00924459691564184 cont.PS.7.13 TCACAGTCAC 7 1.7253 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.13
-0.0389638331728872 -0.249851742500392 13X.PS.1.11 TCACACCAGT 1 1.7286 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.11
-0.36958786267763 0.000268564904460851 13C.PS.7.25 TCACAGCAGA 7 1.6794 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.25
0.130385502699749 0.0484387665297439 cont.PS.14.16 TCAGACCACT 14 1.7002 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.16
0.114783806186627 0.0144805218168111 13C.PS.7.19 TCACACTGTG 7 1.7035 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.19
-0.381360442472097 0.009929642438891 13C.PS.7.23 TCACAGAGTG 7 1.6871 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.23
0.121343992892876 0.0036886701681119 cont.PS.14.12 TCACTCCACT 14 1.7188 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.12
-0.139810474991345 0.0427605382122985 13C.PS.7.21 TCACAGACTC 7 1.6936 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.21
-0.0494665170859915 0.0516914455648807 cont.PS.7.20 TCACGAGTTC 7 1.698 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.20
-0.495590390935087 0.0250833778127948 cont.PS.14.20 TCACGACATC 14 1.6849 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.20
0.051587386681896 -0.102828776005866 13X.PS.3.9 TCACGTAGCT 3 1.733 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.9
0.0503970754135761 0.0407454277178162 13X.PS.3.16 TCACTGTGTG 3 1.7089 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.16
-0.440913613625662 0.00986522407862445 13C.PS.7.24 TCACAGCACT 7 1.6827 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.24
0.088974264682402 0.0681409262673872 13C.PS.7.14 TCACACGTCA 7 1.7242 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.14
-0.121210662653107 0.0538891831434272 cont.PS.14.18 TCAGAGCACA 14 1.6936 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.18
-0.186768268671118 0.0101517320334421 cont.PS.14.23 TCACGTTCGA 14 1.6718 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.14.23
0.0424813085854582 0.0231798542499805 13X.PS.1.16 TCACTCCACT 1 1.7067 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.16
-0.0392249916154551 -0.084762216805358 13X.PS.1.8 TCAACCGGTT 1 1.7384 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.8
0.102406483675075 0.0784892717910448 13C.PS.7.7 TCACACCACA 7 1.7559 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.7
0.227135067921909 0.245301841068397 13C.PS.14.8 TCAACGCGTT 14 1.7515 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.8
-0.0840101605997877 -0.00209616666981838 cont.PS.3.20 TCAGCAGTTC 3 1.6892 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.20
0.17756492334813 0.310793589525062 13C.PS.14.9 TCAAGCCGTT 14 1.7351 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.9
-0.340107681762567 -0.071197373753195 13C.PS.3.32 TCAAGGCCAA 3 1.6805 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.3.32
0.0258986882052922 0.0723838957832057 13X.PS.30.24 TCAGCATGGA 30 1.6925 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.24
0.0666266966299377 0.0539440018554671 13X.PS.14.24 TCACTCTCTG 14 1.6991 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.24
0.0978628800844253 -0.0918061315344143 13X.PS.14.11 TCAAGGTAGC 14 1.7537 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.11
0.0591860300329403 -0.0545750493764197 cont.PS.1.18 TCACACGTCA 1 1.7231 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.1.18
0.0291679414163613 0.0956505522488545 13X.PS.30.23 TCAGCATGCT 30 1.6969 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.23
-0.623097827017223 -0.0120407943642178 cont.PS.30.23 TCACACACAC 30 1.6816 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.23
-0.211130415968806 -0.0494558241149184 cont.PS.3.23 TCAGAGGAGA 3 1.6783 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.23
-0.518201738466933 -0.014122809360801 cont.PS.7.23 TCACTCAGTG 7 1.6838 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.7.23
-0.0426918196888567 -0.255576919639867 13X.PS.1.13 TCACTCACTC 1 1.7177 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.13
0.0880696606914661 0.106815007464754 13C.PS.7.11 TCACACCTGA 7 1.7384 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.11
0.113441554401881 0.16487042312943 13C.PS.7.13 TCACACGAGA 7 1.7286 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.7.13
0.158555353950002 -0.0483669084061961 13X.PS.14.20 TCACTCGAGT 14 1.7155 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.20
-0.209086931591944 0.0268971336944774 13C.PS.30.19 TCACTGTCAG 30 1.6914 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.19
-0.507287642370508 0.0191388606248909 13C.PS.30.20 TCACGAGTTC 30 1.6925 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.20
0.140618904905357 -0.023345572386072 cont.PS.30.11 TCAAGGTTCC 30 1.7297 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.30.11
0.11633682525669 -0.080788281049374 13X.PS.14.12 TCACAGTCTG 14 1.7494 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.12
0.000323627956861423 -0.243031387469985 13X.PS.1.10 TCAATAGGCG 1 1.7319 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.1.10
0.126431844384326 0.0693584409862168 13C.PS.30.17 TCACTGGTCA 30 1.6991 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.17
-0.251369508394296 -0.00296901788222611 13C.PS.30.24 TCAAGCAAGC 30 1.6707 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.24
0.0875728242027059 -0.22634104515394 13X.PS.3.13 TCACGTCTAG 3 1.7209 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.3.13
0.141077227410346 -0.0938159842836354 13X.PS.14.14 TCAATTGGCC 14 1.7384 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.14
0.157613309730935 0.0617922608840223 13C.PS.14.5 TCACAGACAG 14 1.757 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.14.5
-0.0564676632054108 0.17284690480557 13X.PS.30.28 TCACTGGACT 30 1.6794 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.28
0.116772157634347 0.0349683013181865 13X.PS.30.21 TCAGCATCCA 30 1.7056 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.21
-0.55120087347794 0.00565131511645878 13C.PS.30.22 TCACGATCGT 30 1.6805 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.22
0.176617624827459 0.0582419563389851 13C.PS.30.14 TCACGAGTAG 30 1.7122 CAGGACTACHVGGGTWTCTAAT 13CCPS 13C.PS.30.14
0.0449036589433246 0.0971387163844567 13X.PS.14.25 TCACTCTGAG 14 1.6947 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.25
0.134310238137393 -0.153895616218883 13X.PS.14.18 TCAATTCCGG 14 1.7231 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.18
-0.374486446174478 -0.0386546389190413 cont.PS.3.22 TCAGCACTAC 3 1.6827 CAGGACTACHVGGGTWTCTAAT 12CCPS cont.PS.3.22
0.154880799677725 -0.124815415429642 13X.PS.30.15 TCAGACCTGT 30 1.7297 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.15
0.207901399244974 -0.139901794837918 13X.PS.30.14 TCAGACCTCA 30 1.733 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.30.14
-0.0564600608671516 0.124103073939102 13X.PS.14.27 TCACACCTCT 14 1.6849 CAGGACTACHVGGGTWTCTAAT 13CXPS 13X.PS.14.27
Raw
README.md

Clicking on the "CHANGE COLOR" text changes the color scheme for the points. The top legend is clickable allowing each series of points to be hidden. This data is from a 13C cellulose DNA-SIP experiment.

Raw
index.html
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<style>
.axis path,
.axis line {
fill: none;
stroke: #000;
shape-rendering: crispEdges;
}
.axis {
font: 16px sans-serif;
}
.ax-title {
font: 22px sans-serif;
text-anchor: middle;
}
.point {
fill-opacity: 0.75;
stroke-opacity: 1.0;
}
.point.selected {
fill: gray;
stroke: gray;
fill-opacity: 0.25;
stroke-opacity: 0.25;
}
.brush {
fill-opacity: 0.05;
}
#option {
position: absolute;
top: 5;
left: 10;
}
</style>
<svg class="chart"></svg>
</head>
<body>
<script src="http://d3js.org/d3.v3.min.js"></script>
<script src="scatter.js"></script>
</body>
</html>
Raw
scatter.js
var margin = {top: 25, right: 80, bottom: 90, left: 100},
width = 700 - margin.left - margin.right,
height = 500 - margin.top - margin.bottom;
var y = d3.scale.linear()
.range([height, 0]);
var x = d3.scale.linear()
.range([0,width]);
var r = d3.scale.pow().exponent(2)
.range([2,7]);
var legendData = [{color:"#ff7f00", label:"12CCPS"},
{color:"#377eb8", label:"13CCPS"},
{color:"#4daf4a", label:"13CXPS"}];
var days = [1, 3, 7, 14, 30];
var cValueTreatment = function(d) { return d.Treatment; },
color = d3.scale.ordinal()
.range(legendData.map(function(d) { return d.color; } )),
cValueDay = function(d) { return d.Day; },
dayColor = d3.scale.category10();
var yAxis = d3.svg.axis()
.scale(y)
.orient("left");
var xAxis = d3.svg.axis()
.scale(x)
.orient("bottom");
var chart = d3.select(".chart")
.attr("width", width + margin.right + margin.left)
.attr("height", height + margin.top + margin.bottom)
.append("g")
.attr("transform", "translate(" + margin.left + "," + margin.top + ")");
var legend = chart.append("g")
.attr("class", "legend")
.selectAll(".marker")
.data(legendData, function(d) { return d.label })
.enter().append("g");
var markers = legend.append("circle")
.attr("class", "marker")
.attr("cx", function(d, i) { return i * width / (legendData.length + 1) + width / 5 })
.attr("cy", -margin.top / 2)
.attr("fill", function(d) { return d.color } )
.attr("stroke", "black")
.attr("r", 7.5);
legend.append("text")
.attr("x", function(d, i) { return i * width / (legendData.length + 1) + width / 5 } )
.attr("y", -margin.top / 2)
.attr("dx", 10)
.attr("dy", 5)
.attr("class", "axis")
.attr("text-anchor", "start")
.text(function(d) { return d.label });
var left = margin.left + width + 10
bottom = height + margin.top + 10;
var colorButton = d3.select(".chart")
.append("g")
.attr("transform", "translate(" + left + "," + bottom + ")");
colorButton.append("text")
.attr("y", margin.bottom / 2 + 5)
.attr("text-anchor", "end")
.text("CHANGE COLOR");
var colorLegend = d3.select(".chart")
.append("g")
.attr("transform", "translate(" + left + "," + 50 + ")")
.selectAll("g")
.data(days)
.enter().append("g")
.attr("transform", function(d, i) { return "translate(0," + i * 20 + ")"; })
.attr("fill-opacity", 0);
colorLegend
.append("circle")
.attr("r", 5)
.attr("fill", function(d) { return dayColor(d); });
// .attr("cy", function(d, i) { return i * 20; })
colorLegend
.append("text")
.attr("dx", 7)
.attr("dy", 5)
.text(function(d) { return "Day " + d; } );
var colorfunc = cValueTreatment;
var dataset;
var plotted = d3.set(legendData.map(function(d) { return d.label; }));
console.log(plotted.has("12CCPS"));
//console.log(plotted.has("12CCPS"))
d3.csv("readme.csv", type, function(error, data) {
var pad = 0.05;
dataset = data;
x.domain([d3.min(data, function(d) { return d.NMDS1; }) - pad,
d3.max(data, function(d) { return d.NMDS1; }) + pad]);
y.domain([d3.min(data, function(d) { return d.NMDS2; }) - pad,
d3.max(data, function(d) { return d.NMDS2; }) + pad]);
r.domain([d3.min(data, function(d) { return d.Density; }),
d3.max(data, function(d) { return d.Density; })]);
markers.on("click", function(d) {
var button = d3.select(this);
var buttonClass = button.attr("class");
if ( buttonClass !== "clicked" ) {
button.attr("class", "clicked")
.transition(1000)
.attr("fill-opacity", 0);
plotted.remove(d.label);
} else {
button.attr("class", "marker")
.transition(100)
.attr("fill-opacity", 1);
plotted.add(d.label);
}
var dataSel = dataset.filter(function(d) {
return plotted.has(d.Treatment);
});
update(dataSel);
});
var colorClicked = false;
colorButton.on("click", function () {
if ( colorClicked ) {
d3.selectAll(".point")
.transition(1000)
.attr("fill", function(d) { return color(d.Treatment); })
.attr("stroke", function(d) { return color(d.Treatment); });
colorLegend
.transition(1000)
.attr("fill-opacity", 0);
markers.transition(1000).attr("fill-opacity", 1);
colorClicked = false;
} else {
d3.selectAll(".point")
.transition(1000)
.attr("fill", function(d) { return dayColor(d.Day); })
.attr("stroke", function(d) { return dayColor(d.Day); });
colorLegend
.transition(1000)
.attr("fill-opacity", 1);
markers.transition(1000).attr("fill-opacity", 0);
colorClicked = true;
}
});
chart.append("g")
.attr("class", "axis")
.attr("transform", "translate(0," + height + ")")
.call(xAxis)
chart.append("text")
.attr("class", "ax-title")
.attr("transform", "translate(0," + height + ")")
.attr("x", width / 2)
.attr("y", margin.bottom / 2)
.text("NMDS1");
chart.append("g")
.attr("class", "axis")
.call(yAxis)
.append("text")
.attr("class", "ax-title")
.attr("transform", "rotate(-90)")
.attr("x", -height / 2)
.attr("y", -margin.left / 2)
.text("NMDS2");
function update(data, colorfunc, cvalue) {
colorfunc = typeof colorfunc !== "undefined" ? a : color;
cvalue = typeof cvalue !== "undefined" ? a : cValueTreatment;
var point = chart.selectAll(".point")
.data(data, function(d) { return d.SampleID });
point.exit()
.transition(1000)
.attr("r", 0)
.remove();
point.enter().append("circle")
.attr("class", "point" )
.attr("cx", function(d) { return x(d.NMDS1); })
.attr("cy", function(d) { return y(d.NMDS2); })
.attr("fill", function(d) { return colorfunc(cvalue(d)); })
.attr("stroke", function(d) { return colorfunc(cvalue(d)); })
.attr("r", 0)
.transition(2000)
.attr("r", function(d) { return r(d.Density); });
}
update(data);
var brush = d3.svg.brush()
.x(x)
.y(y)
.on("brush", brushmove)
.on("brushend", brushend);
chart.append("g")
.attr("class", "brush")
.call(brush);
function brushmove() {
var e = brush.extent();
chart.selectAll(".point").classed("selected", function(d) {
return e[0][0] > d.NMDS1 || d.NMDS1 > e[1][0]
|| e[0][1] > d.NMDS2 || d.NMDS2 > e[1][1];
});
}
function brushend() {
if (brush.empty()) chart.selectAll(".selected")
.classed("selected", false);
}
});
function type(d) {
d.NMDS1 = +d.NMDS1;
d.NMDS2 = +d.NMDS2;
d.Density = +d.Density;
return d;
}
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