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@peterhurford
peterhurford / install_xelatex_on_mac.txt
Last active June 17, 2024 15:02
How to install latex and xelatex on Mac so that Jupyter "Download as PDF" will work
brew install pandoc
brew tap homebrew/cask
brew install --cask basictex
eval "$(/usr/libexec/path_helper)"
# Update $PATH to include `/usr/local/texlive/2022basic/bin/universal-darwin`
sudo tlmgr update --self
sudo tlmgr install texliveonfly
sudo tlmgr install xelatex
sudo tlmgr install adjustbox
sudo tlmgr install tcolorbox
@sirselim
sirselim / basecalling_notes.md
Last active August 1, 2023 01:27
a collection of my notes while working on nanopore basecalling on the Jetson Xavier

Jetson Xavier basecalling notes

initial basecalling runs

'fast' flip-flop calling on the Jetson Xavier

guppy_basecaller --disable_pings --compress_fastq -c dna_r9.4.1_450bps_fast.cfg -i flongle_fast5_pass/ -s flongle_test2 -x 'auto' --recursive
@geddski
geddski / styles.less
Last active April 3, 2017 10:09
improve Atom editor git gutter
atom-text-editor::shadow {
.line-numbers{
padding-left: 4px !important;
}
.git-line-modified, .git-line-added{
margin-left: -4px;
padding-left: 2px !important;
opacity: .5
}
@magicznyleszek
magicznyleszek / jekyll-and-liquid.md
Last active January 12, 2024 03:46
Jekyll & Liquid Cheatsheet

Jekyll & Liquid Cheatsheet

A list of the most common functionalities in Jekyll (Liquid). You can use Jekyll with GitHub Pages, just make sure you are using the proper version.

Running

Running a local server for testing purposes:

@thigm85
thigm85 / lda_vs_pca.R
Last active March 16, 2021 11:31
Visualize the difference between PCA and LDA on the iris dataset.
require(MASS)
require(ggplot2)
require(scales)
require(gridExtra)
pca <- prcomp(iris[,-5],
center = TRUE,
scale. = TRUE)
prop.pca = pca$sdev^2/sum(pca$sdev^2)
@guifromrio
guifromrio / compress-pdf-with-gs.md
Created August 30, 2013 14:39
Compress PDF files with ghostscript

This can reduce files to ~15% of their size (2.3M to 345K, in one case) with no obvious degradation of quality.

ghostscript -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/printer -dNOPAUSE -dQUIET -dBATCH -sOutputFile=output.pdf input.pdf

Other options for PDFSETTINGS:

  • /screen selects low-resolution output similar to the Acrobat Distiller "Screen Optimized" setting.
  • /ebook selects medium-resolution output similar to the Acrobat Distiller "eBook" setting.
  • /printer selects output similar to the Acrobat Distiller "Print Optimized" setting.
  • /prepress selects output similar to Acrobat Distiller "Prepress Optimized" setting.
@killercup
killercup / pandoc.css
Created July 3, 2013 11:31
Add this to your Pandoc HTML documents using `--css pandoc.css` to make them look more awesome. (Tested with Markdown and LaTeX.)
/*
* I add this to html files generated with pandoc.
*/
html {
font-size: 100%;
overflow-y: scroll;
-webkit-text-size-adjust: 100%;
-ms-text-size-adjust: 100%;
}
@CristinaSolana
CristinaSolana / gist:1885435
Created February 22, 2012 14:56
Keeping a fork up to date

1. Clone your fork:

git clone git@github.com:YOUR-USERNAME/YOUR-FORKED-REPO.git

2. Add remote from original repository in your forked repository:

cd into/cloned/fork-repo
git remote add upstream git://github.com/ORIGINAL-DEV-USERNAME/REPO-YOU-FORKED-FROM.git
git fetch upstream