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// Returns a random DNA base | |
const returnRandBase = () => { | |
const dnaBases = ['A', 'T', 'C', 'G'] | |
return dnaBases[Math.floor(Math.random() * 4)] | |
} | |
// Returns a random single stand of DNA containing 15 bases | |
const mockUpStrand = () => { | |
const newStrand = [] | |
for (let i = 0; i < 15; i++) { | |
newStrand.push(returnRandBase()) | |
} | |
return newStrand | |
} | |
function pAequorFactory (number, array) { | |
return { | |
specimenNum: number, | |
dna: array, | |
mutate() { | |
const randomNumb = Math.floor(Math.random()*15); | |
const pickRandBase = this.dna[randomNumb]; | |
var newBase = ""; | |
do { | |
newBase = returnRandBase(); | |
} while (pickRandBase === newBase); | |
this.dna[randomNumb] = newBase; | |
}, | |
compareDNA(input) { | |
let DNACounter = 0; | |
for (i = 0; i < 15; i++) { | |
if (this.dna[i] === input["dna"][i]) { | |
DNACounter++; | |
} | |
} | |
const percent = Math.round(DNACounter / 15 * 100); | |
console.log(`Specimen # ${this.specimenNum} is ${percent}% identical with specimen # ${input["specimenNum"]}.`) | |
return percent; | |
}, | |
willLikelySurvive() { | |
CGCounter = 0; | |
for (i = 0; i < 15; i++) { | |
if (this.dna === "C" || this.dna === "G") { | |
CGCounter++; | |
} | |
} | |
return (CGCounter / 15) >= 0.6; | |
}, | |
complementStrand() { | |
const complementDNA = []; | |
for (let base of this["dna"]) { | |
switch (base) { | |
case "A": | |
complementDNA.push("T"); | |
break; | |
case "T": | |
complementDNA.push("A"); | |
break; | |
case "C": | |
complementDNA.push("G"); | |
break; | |
case "G": | |
complementDNA.push("C"); | |
break; | |
default: | |
complementDNA.push("unidentified"); | |
} | |
} | |
return complementDNA; | |
} | |
} | |
} | |
// Make 30 Organisms | |
const pAequor = []; | |
for (i = 1; i < 31; i++) { | |
pAequor.push(pAequorFactory(i, mockUpStrand())); | |
} | |
// just to see what one looks like | |
console.log(pAequor[0]) | |
// two most related | |
let mostRelatedPercent = 0; | |
let mostRelatedSpec1 = 0; | |
let mostRelatedSpec2 = 0; | |
for (let i = 0; i < 30; i++) { | |
for (let j = 0; j < 30; j++) { | |
if (i !== j) { | |
if (pAequor[i].compareDNA(pAequor[j]) > mostRelatedPercent) { | |
mostRelatedPercent = pAequor[i].compareDNA(pAequor[j]); | |
mostRelatedSpec1 = pAequor[i].specimenNum; | |
mostRelatedSpec2 = pAequor[j].specimenNum; | |
} | |
} else { continue; } | |
} | |
} | |
console.log(`Specimen #${mostRelatedSpec1} and #${mostRelatedSpec2} are the most identical with ${mostRelatedPercent}%.`) | |
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