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makie.log
C:\Users\cstamas\Documents\Coding\makie_precompile>julia
_
_ _ _(_)_ | Documentation: https://docs.julialang.org
(_) | (_) (_) |
_ _ _| |_ __ _ | Type "?" for help, "]?" for Pkg help.
| | | | | | |/ _` | |
| | |_| | | | (_| | | Version 1.1.1 (2019-05-16)
_/ |\__'_|_|_|\__'_| | Official https://julialang.org/ release
|__/ |
julia> using Pkg
(v1.1) pkg> activate .
(makie_precompile) pkg> st
Status `C:\Users\cstamas\Documents\Coding\makie_precompile\Project.toml`
(empty environment)
julia> pkg"up; add Makie#master GLMakie#master AbstractPlotting#master PackageCompiler#sd-notomls MakieGallery#master MakieThemes ImageShow WebIO#sd-httpheader Interact WebSockets JSCall CSSUtil StatsMakie GDAL SpecialFunctions ImageFiltering"
Updating registry at `C:\Users\cstamas\.julia\registries\General`
Updating git-repo `https://github.com/JuliaRegistries/General.git`
Resolving package versions...
Updating git-repo `https://github.com/JuliaPlots/Makie.jl.git`
Updating git-repo `https://github.com/JuliaPlots/GLMakie.jl.git`
Updating git-repo `https://github.com/JuliaPlots/AbstractPlotting.jl.git`
Updating git-repo `https://github.com/JuliaLang/PackageCompiler.jl.git`
Updating git-repo `https://github.com/JuliaPlots/MakieGallery.jl.git`
Updating git-repo `https://github.com/JuliaGizmos/WebIO.jl.git`
Resolving package versions...
Updating `C:\Users\cstamas\Documents\Coding\makie_precompile\Project.toml`
[537997a7] + AbstractPlotting v0.9.7 #master (https://github.com/JuliaPlots/AbstractPlotting.jl.git)
[70588ee8] + CSSUtil v0.1.0
[add2ef01] + GDAL v0.2.0
[e9467ef8] + GLMakie v0.0.5 #master (https://github.com/JuliaPlots/GLMakie.jl.git)
[6a3955dd] + ImageFiltering v0.6.2
[4e3cecfd] + ImageShow v0.2.0
[c601a237] + Interact v0.10.2
[7408c33d] + JSCall v0.1.0
[ee78f7c6] + Makie v0.9.3 #master (https://github.com/JuliaPlots/Makie.jl.git)
[dbd62bd0] + MakieGallery v0.0.7+ #master (https://github.com/JuliaPlots/MakieGallery.jl.git)
[e296ed71] + MakieThemes v0.0.2
[9b87118b] + PackageCompiler v0.6.3+ #sd-notomls (https://github.com/JuliaLang/PackageCompiler.jl.git)
[276daf66] + SpecialFunctions v0.7.2
[65254759] + StatsMakie v0.0.5
[0f1e0344] + WebIO v0.8.1+ #sd-httpheader (https://github.com/JuliaGizmos/WebIO.jl.git)
[104b5d7c] + WebSockets v1.5.2
Updating `C:\Users\cstamas\Documents\Coding\makie_precompile\Manifest.toml`
[621f4979] + AbstractFFTs v0.4.1
[537997a7] + AbstractPlotting v0.9.7 #master (https://github.com/JuliaPlots/AbstractPlotting.jl.git)
[c7e460c6] + ArgParse v0.6.2
[7d9fca2a] + Arpack v0.3.1
[4fba245c] + ArrayInterface v0.1.1
[bf4720bc] + AssetRegistry v0.1.0
[13072b0f] + AxisAlgorithms v1.0.0
[39de3d68] + AxisArrays v0.3.0
[aae01518] + BandedMatrices v0.9.1
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.4
[764a87c0] + BoundaryValueDiffEq v2.2.3
[e1450e63] + BufferedStreams v1.0.0
[631607c0] + CMake v1.1.1
[d5fb7624] + CMakeWrapper v0.2.3
[70588ee8] + CSSUtil v0.1.0
[00ebfdb7] + CSTParser v0.5.2
[49dc2e85] + Calculus v0.4.1
[aafaddc9] + CatIndices v0.2.0
[324d7699] + CategoricalArrays v0.5.2
[a2cac450] + ColorBrewer v0.4.0
[35d6a980] + ColorSchemes v3.2.0
[3da002f7] + ColorTypes v0.8.0
[c3611d14] + ColorVectorSpace v0.6.2
[5ae59095] + Colors v0.9.5
[861a8166] + Combinatorics v0.7.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.1.0
[ed09eef8] + ComputationalResources v0.3.0
[8f4d0f93] + Conda v1.2.0
[d38c429a] + Contour v0.5.1
[150eb455] + CoordinateTransformations v0.5.0
[dc8bdbbb] + CustomUnitRanges v0.2.0
[864edb3b] + DataStructures v0.15.0
[bcd4f6db] + DelayDiffEq v5.2.0
[2b5f629d] + DiffEqBase v5.8.1
[459566f4] + DiffEqCallbacks v2.5.2
[01453d9d] + DiffEqDiffTools v0.10.0
[5a0ffddc] + DiffEqFinancial v2.1.0
[c894b116] + DiffEqJump v6.1.1
[78ddff82] + DiffEqMonteCarlo v0.14.0
[77a26b50] + DiffEqNoiseProcess v3.3.0
[9fdde737] + DiffEqOperators v3.5.0
[055956cb] + DiffEqPhysics v3.1.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.0.10
[0c46a032] + DifferentialEquations v6.4.0
[c619ae07] + DimensionalPlotRecipes v0.2.0
[b4f34e82] + Distances v0.8.0
[31c24e10] + Distributions v0.20.0
[ffbed154] + DocStringExtensions v0.7.0
[e30172f5] + Documenter v0.22.4
[d4d017d3] + ExponentialUtilities v1.4.0
[4f61f5a4] + FFTViews v0.2.0
[7a1cc6ca] + FFTW v0.2.4
[5789e2e9] + FileIO v1.0.6
[1a297f60] + FillArrays v0.6.1
[53c48c17] + FixedPointNumbers v0.5.3
[f6369f11] + ForwardDiff v0.10.3
[b38be410] + FreeType v2.1.1
[663a7486] + FreeTypeAbstraction v0.4.2
[da1fdf0e] + FreqTables v0.3.1
[069b7b12] + FunctionWrappers v1.0.0
[de31a74c] + FunctionalCollections v0.5.0
[add2ef01] + GDAL v0.2.0
[f7f18e0c] + GLFW v2.3.0
[e9467ef8] + GLMakie v0.0.5 #master (https://github.com/JuliaPlots/GLMakie.jl.git)
[01680d73] + GenericSVD v0.2.1
[4d00f742] + GeometryTypes v0.7.4
[a2bd30eb] + Graphics v0.4.0
[cd3eb016] + HTTP v0.8.0
[0862f596] + HTTPClient v0.2.1
[d9be37ee] + Homebrew v0.7.1
[bbac6d45] + IdentityRanges v0.3.0
[2803e5a7] + ImageAxes v0.6.0
[a09fc81d] + ImageCore v0.8.3
[6a3955dd] + ImageFiltering v0.6.2
[6218d12a] + ImageMagick v0.7.3
[4e3cecfd] + ImageShow v0.2.0
[02fcd773] + ImageTransformations v0.8.0
[9b13fd28] + IndirectArrays v0.5.0
[83e8ac13] + IniFile v0.5.0
[c601a237] + Interact v0.10.2
[d3863d7c] + InteractBase v0.10.1
[a98d9a8b] + Interpolations v0.12.1
[8197267c] + IntervalSets v0.3.1
[c8e1da08] + IterTools v1.1.1
[42fd0dbc] + IterativeSolvers v0.8.1
[82899510] + IteratorInterfaceExtensions v1.0.0
[7408c33d] + JSCall v0.1.0
[97c1335a] + JSExpr v0.5.0
[682c06a0] + JSON v0.20.0
[5ab0869b] + KernelDensity v0.5.1
[bcebb21b] + Knockout v0.2.2
[5078a376] + LazyArrays v0.8.1
[b27032c2] + LibCURL v0.5.1
[522f3ed2] + LibExpat v0.5.0
[2ec943e9] + Libz v1.0.0
[d3d80556] + LineSearches v7.0.1
[4345ca2d] + Loess v0.5.0
[1914dd2f] + MacroTools v0.5.0
[ee78f7c6] + Makie v0.9.3 #master (https://github.com/JuliaPlots/Makie.jl.git)
[dbd62bd0] + MakieGallery v0.0.7+ #master (https://github.com/JuliaPlots/MakieGallery.jl.git)
[e296ed71] + MakieThemes v0.0.2
[dbb5928d] + MappedArrays v0.2.1
[a3b82374] + MatrixFactorizations v0.0.4
[739be429] + MbedTLS v0.6.8
[442fdcdd] + Measures v0.3.0
[7269a6da] + MeshIO v0.3.1
[e1d29d7a] + Missings v0.4.1
[66fc600b] + ModernGL v1.0.0
[46d2c3a1] + MuladdMacro v0.2.1
[f9640e96] + MultiScaleArrays v1.4.0
[d41bc354] + NLSolversBase v7.3.1
[2774e3e8] + NLsolve v4.0.0
[77ba4419] + NaNMath v0.3.2
[86f7a689] + NamedArrays v0.9.2
[510215fc] + Observables v0.2.3
[6fe1bfb0] + OffsetArrays v0.11.0
[429524aa] + Optim v0.18.1
[bac558e1] + OrderedCollections v1.1.0
[1dea7af3] + OrdinaryDiffEq v5.7.0
[90014a1f] + PDMats v0.9.7
[9b87118b] + PackageCompiler v0.6.3+ #sd-notomls (https://github.com/JuliaLang/PackageCompiler.jl.git)
[19eb6ba3] + Packing v0.3.0
[5432bcbf] + PaddedViews v0.4.2
[65888b18] + ParameterizedFunctions v4.1.1
[d96e819e] + Parameters v0.10.3
[fa939f87] + Pidfile v1.1.0
[995b91a9] + PlotUtils v0.5.8
[e409e4f3] + PoissonRandom v0.4.0
[f27b6e38] + Polynomials v0.5.2
[2dfb63ee] + PooledArrays v0.5.1
[85a6dd25] + PositiveFactorizations v0.2.2
[1fd47b50] + QuadGK v2.0.4
[e6cf234a] + RandomNumbers v1.3.0
[b3c3ace0] + RangeArrays v0.3.1
[c84ed2f1] + Ratios v0.3.1
[3cdcf5f2] + RecipesBase v0.6.0
[731186ca] + RecursiveArrayTools v0.20.0
[f2c3362d] + RecursiveFactorization v0.0.1
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[ae5879a3] + ResettableStacks v0.6.0
[79098fc4] + Rmath v0.5.0
[f2b01f46] + Roots v0.8.1
[6038ab10] + Rotations v0.11.1
[992d4aef] + Showoff v0.2.1
[73760f76] + SignedDistanceFields v0.4.0
[699a6c99] + SimpleTraits v0.8.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.7.2
[90137ffa] + StaticArrays v0.10.3
[2913bbd2] + StatsBase v0.30.0
[4c63d2b9] + StatsFuns v0.8.0
[65254759] + StatsMakie v0.0.5
[9672c7b4] + SteadyStateDiffEq v1.4.0
[789caeaf] + StochasticDiffEq v6.3.0
[09ab397b] + StructArrays v0.3.4
[c3572dad] + Sundials v3.5.0
[123dc426] + SymEngine v0.5.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.4
[b718987f] + TextWrap v0.3.0
[06e1c1a7] + TiledIteration v0.2.3
[0796e94c] + Tokenize v0.5.3
[a2a6695c] + TreeViews v0.3.0
[30578b45] + URIParser v0.4.0
[1cfade01] + UnicodeFun v0.4.0
[81def892] + VersionParsing v1.1.3
[0f1e0344] + WebIO v0.8.1+ #sd-httpheader (https://github.com/JuliaGizmos/WebIO.jl.git)
[104b5d7c] + WebSockets v1.5.2
[cc8bc4a8] + Widgets v0.6.1
[c17dfb99] + WinRPM v0.4.2
[efce3f68] + WoodburyMatrices v0.4.1
[a5390f91] + ZipFile v0.8.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[7b1f6079] + FileWatching
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
julia> pkg"up; add Query DataFrames CSV StatsBase RDatasets Tables StructArrays#master DataValues CategoricalArrays WeakRefStrings StatsModels Distributions OffsetArrays TableTraits ImageMagick"
Updating registry at `C:\Users\cstamas\.julia\registries\General`
Updating git-repo `https://github.com/JuliaRegistries/General.git`
Updating git-repo `https://github.com/JuliaPlots/MakieGallery.jl.git`
Updating git-repo `https://github.com/JuliaPlots/Makie.jl.git`
Updating git-repo `https://github.com/JuliaPlots/AbstractPlotting.jl.git`
Updating git-repo `https://github.com/JuliaGizmos/WebIO.jl.git`
Updating git-repo `https://github.com/JuliaLang/PackageCompiler.jl.git`
Updating git-repo `https://github.com/JuliaPlots/GLMakie.jl.git`
Resolving package versions...
Updating `C:\Users\cstamas\Documents\Coding\makie_precompile\Project.toml`
[no changes]
Updating `C:\Users\cstamas\Documents\Coding\makie_precompile\Manifest.toml`
[no changes]
Cloning git-repo `https://github.com/piever/StructArrays.jl.git`
Updating git-repo `https://github.com/piever/StructArrays.jl.git`
Resolving package versions...
Installed TableShowUtils ─── v0.2.5
Installed TableTraitsUtils ─ v0.4.0
Installed IterableTables ─── v0.11.0
Installed StatsModels ────── v0.5.0
Installed QueryOperators ─── v0.8.0
Installed Query ──────────── v0.11.0
Installed DataValues ─────── v0.4.7
Updating `C:\Users\cstamas\Documents\Coding\makie_precompile\Project.toml`
[336ed68f] + CSV v0.5.5
[324d7699] + CategoricalArrays v0.5.2
[a93c6f00] + DataFrames v0.18.2
[e7dc6d0d] + DataValues v0.4.7
[31c24e10] + Distributions v0.20.0
[6218d12a] + ImageMagick v0.7.3
[6fe1bfb0] + OffsetArrays v0.11.0
[1a8c2f83] + Query v0.11.0
[ce6b1742] + RDatasets v0.6.1
[2913bbd2] + StatsBase v0.30.0
[3eaba693] + StatsModels v0.5.0
[09ab397b] + StructArrays v0.4.0 #master (https://github.com/piever/StructArrays.jl.git)
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.4
[ea10d353] + WeakRefStrings v0.6.1
Updating `C:\Users\cstamas\Documents\Coding\makie_precompile\Manifest.toml`
[336ed68f] + CSV v0.5.5
[944b1d66] + CodecZlib v0.5.2
[a93c6f00] + DataFrames v0.18.2
[e7dc6d0d] + DataValues v0.4.7
[8f5d6c58] + EzXML v0.9.1
[1c8ee90f] + IterableTables v0.11.0
[78c3b35d] + Mocking v0.5.7
[69de0a69] + Parsers v0.3.5
[1a8c2f83] + Query v0.11.0
[2aef5ad7] + QueryOperators v0.8.0
[df47a6cb] + RData v0.6.0
[ce6b1742] + RDatasets v0.6.1
[3eaba693] + StatsModels v0.5.0
[09ab397b] ↑ StructArrays v0.3.4 ⇒ v0.4.0 #master (https://github.com/piever/StructArrays.jl.git)
[5e66a065] + TableShowUtils v0.2.5
[382cd787] + TableTraitsUtils v0.4.0
[f269a46b] + TimeZones v0.9.1
[3bb67fe8] + TranscodingStreams v0.9.4
[ea10d353] + WeakRefStrings v0.6.1
[9abbd945] + Profile
julia> using PackageCompiler
julia> PackageCompiler.blacklist!(:GDAL, :SpecialFunctions)
4-element Array{Symbol,1}:
:QuartzImageIO
:Homebrew
:GDAL
:SpecialFunctions
help?> PackageCompiler.compile_incremental
compile_incremental(
toml_path::String, snoopfile::String;
force = false, precompile_file = nothing, verbose = true,
debug = false, cc_flags = nothing
)
Extract all calls from `snoopfile` and ahead of time compiles them
incrementally into the current system image.
`force = true` will replace the old system image with the new one.
The argument `toml_path` should contain a project file of the packages that `snoopfile` explicitly uses.
Implicitly used packages & modules don't need to be contained!
To compile just a single package, see the simpler version `compile_incremental(package::Symbol)`:
─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
compile_incremental(packages::Symbol...; kw_args...)
Incrementally compile packages into the current system image. force = true will replace the old system image with the new one. This process requires a script that julia will run in order to
determine which functions to compile. A package may define a script called snoopfile.jl for this purpose. If this file cannot be found the package's test script Package/test/runtests.jl will be
used. compile_incremental will search for snoopfile.jl in the package's root directory and in the folders Package/src and Package/snoop. For a more explicit version of compileincremental, see:
`compileincremental(toml_path::String, snoopfile::String)`
Not all packages can currently be compiled into the system image. By default, compile_incremental(:Package) will also compile all of Package's dependencies. It can still be desirable to compile
packages with dependencies that cannot be compiled. For this reasoncompile_incrementaloffers the ability for the user to pass a list of blacklisted packages that will be ignored during the
compilation process. These are passed as a vector of package names (defined as either strings or symbols) using theblacklist keyword argument`
julia> sysnew, sysold = PackageCompiler.compile_incremental(:Tables, :Makie, :StatsMakie, :DataFrames, :CSV, install = true)
Resolving package versions...
Updating `C:\Users\cstamas\Documents\Coding\makie_precompile\Project.toml`
[35d6a980] + ColorSchemes v3.2.0
[864edb3b] + DataStructures v0.15.0
[e30172f5] + Documenter v0.22.4
[5789e2e9] + FileIO v1.0.6
[f7f18e0c] + GLFW v2.3.0
[a09fc81d] + ImageCore v0.8.3
[02fcd773] + ImageTransformations v0.8.0
[b964fa9f] + LaTeXStrings v1.0.3
[7269a6da] + MeshIO v0.3.1
[66fc600b] + ModernGL v1.0.0
[2aef5ad7] + QueryOperators v0.8.0
[a5390f91] + ZipFile v0.8.1
[ade2ca70] + Dates
[9a3f8284] + Random
[8dfed614] + Test
Updating `C:\Users\cstamas\Documents\Coding\makie_precompile\Manifest.toml`
[b964fa9f] + LaTeXStrings v1.0.3
┌ Warning: Package GR could be resolved, so it can't be blacklisted
└ @ PackageCompiler C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\src\snooping.jl:112
┌ Warning: Snoop file errored. Precompile statements were recorded untill error!
│ exception =
│ LoadError: ArgumentError: Package DataValues not found in current path:
│ - Run `import Pkg; Pkg.add("DataValues")` to install the DataValues package.
│
│ in expression starting at C:\Users\cstamas\.julia\packages\Tables\y8TQG\test\runtests.jl:1
└ @ Main C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:6
WARNING: using Makie.AbstractPlotting in module Main conflicts with an existing identifier.
[ Info: starting from index 1
running tutorial_simple_scatter
running tutorial_markersize
running tutorial_simple_line
running tutorial_adding_to_a_scene
running tutorial_adjusting_scene_limits
running tutorial_basic_theming
running tutorial_heatmap
running tutorial_linesegments
running tutorial_barplot
running test_heatmap___image_overlap
running animation
running barplot_1
running poly_and_colormap
Example quiver failed with source:
using AbstractPlotting, Makie
using ImageFiltering
x = range(-2, stop = 2, length = 21)
y = x
z = x .* exp.(-x .^ 2 .- (y') .^ 2)
scene = contour(x, y, z, levels = 10, linewidth = 3)
u, v = ImageFiltering.imgradients(z, KernelFactors.ando3)
arrows!(x, y, u, v, arrowsize = 0.05)
┌ Warning: Snoop file errored. Precompile statements were recorded untill error!
│ exception =
│ LoadError: LoadError: ArgumentError: Package ImageFiltering not found in current path:
│ - Run `import Pkg; Pkg.add("ImageFiltering")` to install the ImageFiltering package.
│
│ in expression starting at quiver_1:2
│ in expression starting at C:\Users\cstamas\.julia\packages\Makie\sUR0m\test\runtests.jl:12
└ @ Main C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:6
Test Summary: | Pass Total
boxplot | 12 12
density: Error During Test at C:\Users\cstamas\.julia\packages\StatsMakie\V9Z8K\test\runtests.jl:65
Got exception outside of a @test
MethodError: no method matching iterate(::Tables.CopiedColumns{NamedTuple{(),Tuple{}}})
Closest candidates are:
iterate(!Matched::Core.SimpleVector) at essentials.jl:568
iterate(!Matched::Core.SimpleVector, !Matched::Any) at essentials.jl:568
iterate(!Matched::ExponentialBackOff) at error.jl:199
...
Stacktrace:
[1] iterate at .\generator.jl:44 [inlined]
[2] collect(::Base.Generator{Tables.CopiedColumns{NamedTuple{(),Tuple{}}},Type{StatsMakie.UniqueValues}}) at .\array.jl:606
[3] map(::Type, ::Tables.CopiedColumns{NamedTuple{(),Tuple{}}}) at .\abstractarray.jl:2044
[4] #convert_arguments#51(::AbstractPlotting.Automatic, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::Type{Surface{...}}, ::Style) at C:\Users\cstamas\.julia\packages\StatsMakie\V9Z8K\src\group\tables.jl:161
[5] #convert_arguments#25 at C:\Users\cstamas\.julia\packages\StatsMakie\V9Z8K\src\group\tables.jl:155 [inlined]
[6] convert_arguments(::Type{Surface{...}}, ::StatsMakie.Analysis{typeof(StatsMakie._density),NamedTuple{(:bandwidth,),Tuple{Tuple{Float64,Float64}}}}, ::Data{NamedTuple{(:x, :y),Tuple{Array{Float64,1},Array{Float64,1}}}}, ::Tuple{Symbol,Symbol}) at C:\Users\cstamas\.julia\packages\StatsMakie\V9Z8K\src\group\tables.jl:67
[7] #plot!#195(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::Scene, ::Type{Surface{...}}, ::Attributes, ::StatsMakie.Analysis{typeof(StatsMakie._density),NamedTuple{(:bandwidth,),Tuple{Tuple{Float64,Float64}}}}, ::Vararg{Any,N} where N) at C:\Users\cstamas\.julia\packages\AbstractPlotting\eLqZf\src\interfaces.jl:498
[8] plot!(::Scene, ::Type{Surface{...}}, ::Attributes, ::StatsMakie.Analysis{typeof(StatsMakie._density),NamedTuple{(:bandwidth,),Tuple{Tuple{Float64,Float64}}}}, ::Data{NamedTuple{(:x, :y),Tuple{Array{Float64,1},Array{Float64,1}}}}, ::Tuple{Symbol,Symbol}) at C:\Users\cstamas\.julia\packages\AbstractPlotting\eLqZf\src\interfaces.jl:485
[9] #surface#104(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::StatsMakie.Analysis{typeof(StatsMakie._density),NamedTuple{(:bandwidth,),Tuple{Tuple{Float64,Float64}}}}, ::Vararg{Any,N} where N) at C:\Users\cstamas\.julia\packages\AbstractPlotting\eLqZf\src\recipes.jl:11
[10] surface(::StatsMakie.Analysis{typeof(StatsMakie._density),NamedTuple{(:bandwidth,),Tuple{Tuple{Float64,Float64}}}}, ::Data{NamedTuple{(:x, :y),Tuple{Array{Float64,1},Array{Float64,1}}}}, ::Vararg{Any,N} where N) at C:\Users\cstamas\.julia\packages\AbstractPlotting\eLqZf\src\recipes.jl:11
[11] top-level scope at C:\Users\cstamas\.julia\packages\StatsMakie\V9Z8K\test\runtests.jl:89
[12] top-level scope at C:\cygwin\home\Administrator\buildbot\worker\package_win64\build\usr\share\julia\stdlib\v1.1\Test\src\Test.jl:1083
[13] top-level scope at C:\Users\cstamas\.julia\packages\StatsMakie\V9Z8K\test\runtests.jl:66
[14] include at .\boot.jl:326 [inlined]
[15] include_relative(::Module, ::String) at .\loading.jl:1038
[16] include(::Module, ::String) at .\sysimg.jl:29
[17] include(::String) at .\client.jl:403
[18] top-level scope at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:4
[19] include at .\boot.jl:326 [inlined]
[20] include_relative(::Module, ::String) at .\loading.jl:1038
[21] include(::Module, ::String) at .\sysimg.jl:29
[22] exec_options(::Base.JLOptions) at .\client.jl:267
[23] _start() at .\client.jl:436
Test Summary: | Pass Error Total
density | 8 1 9
┌ Warning: Snoop file errored. Precompile statements were recorded untill error!
│ exception =
│ LoadError: Some tests did not pass: 8 passed, 0 failed, 1 errored, 0 broken.
│ in expression starting at C:\Users\cstamas\.julia\packages\StatsMakie\V9Z8K\test\runtests.jl:65
└ @ Main C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:6
Running tests:
Test Summary: | Pass Total
make_unique | 3 3
Test Summary: | Pass Total
count | 2 2
Test Summary: | Pass Total
inner_outer | 2 2
PASSED: utils.jl
Test Summary: | Pass Total
hcat | 10 10
Test Summary: | Pass Total
hcat: copying | 26 26
Test Summary: | Pass Total
hcat ::AbstractDataFrame | 2 2
Test Summary: | Pass Total
hcat ::AbstractDataFrame | 2 2
Test Summary: | Pass Total
hcat ::AbstractVectors | 11 11
Test Summary: | Pass Total
hcat: copycols | 76 76
Test Summary: | Pass Total
vcat | 21 21
Test Summary: | Pass Total
vcat copy | 2 2
Test Summary: | Pass Total
vcat >2 args | 4 4
Test Summary: | Pass Total
vcat mixed coltypes | 18 18
Test Summary: | Pass Total
vcat out of order | 20 20
Test Summary: | Pass Total
vcat with cols=:union | 6 6
Test Summary: | Pass Total
vcat with cols=:intersect | 6 6
Test Summary: | Pass Total
vcat with cols::Vector | 15 15
Test Summary: | Pass Total
vcat errors | 32 32
Test Summary: | Pass Total
vcat with view | 1 1
PASSED: cat.jl
Test Summary: | Pass Total
constructors | 57 57
Test Summary: | Pass Total
completecases and dropmissing | 99 99
Test Summary: | Pass Total
reshape | 53 53
Test Summary: | Pass Total
merge | 17 17
PASSED: data.jl
Test Summary: | Pass Total
selector mutation | 12 12
Test Summary: | Pass Total
fuzzy matching and ArgumentError | 8 8
PASSED: index.jl
Test Summary: | Pass Total
equality | 9 9
Test Summary: | Pass Total
copying | 10 10
Test Summary: | Pass Total
similar / missings | 2 2
Test Summary: | Pass Total
Associative methods | 37 37
Test Summary: | Pass Total
DataFrame constructors | 19 19
Test Summary: | Pass Total
push!(df, row) | 31 31
Test Summary: | Pass Total
deletecols! | 13 13
Test Summary: | Pass Total
deletecols | 52 52
Test Summary: | Pass Total
select! | 28 28
Test Summary: | Pass Total
select | 51 51
Test Summary: | Pass Total
deleterows! | 40 40
Test Summary: | Pass Total
describe | 6 6
Test Summary: | Pass Total
append! | 11 11
Test Summary: | Pass Total
categorical! | 4 4
Test Summary: | Pass Total
unstack promotion to support missing values | 8 8
┌ Warning: Duplicate entries in unstack at row 3 for key 1 and variable a.
└ @ DataFrames C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\src\abstractdataframe\reshape.jl:244
┌ Warning: Duplicate entries in unstack at row 3 for key (1, 1) and variable a.
└ @ DataFrames C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\src\abstractdataframe\reshape.jl:315
Test Summary: | Pass Total
duplicate entries in unstack warnings | 9 9
┌ Warning: Missing value in variable variable at row 3. Skipping.
└ @ DataFrames C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\src\abstractdataframe\reshape.jl:224
┌ Warning: Missing value in variable variable at row 3. Skipping.
└ @ DataFrames C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\src\abstractdataframe\reshape.jl:307
Test Summary: | Pass Total
missing values in colkey | 6 6
Test Summary: | Pass Total
stack-unstack correctness | 2 2
Test Summary: | Pass Total
rename | 20 20
Test Summary: | Pass Total
size | 5 5
Test Summary: | Pass Total
description | 8 8
Test Summary: | Pass Total
misc | 1 1
Test Summary: | Pass Total
column conversions | 46 46
Test Summary: | Pass Total
similar | 8 8
Test Summary: | Pass Total
setindex! special cases | 9 9
Test Summary: | Pass Total
passing range to a DataFrame | 1 1
Test Summary: | Pass Total
test getindex using df[col] and df[cols] syntax | 11 11
Test Summary: | Pass Total
test corner case of getindex | 1 1
Test Summary: | Pass Total
empty data frame getindex | 8 8
Test Summary: | Pass Total
handling of end in indexing | 22 22
Test Summary: | Pass Total
aliasing in indexing | 8 8
Test Summary: | Pass Total
permutecols! | 21 21
Test Summary: | Pass Total
getproperty, setproperty! and propertynames | 10 10
Test Summary: | Pass Total
duplicate column names | 2 2
Test Summary: | Pass Total
parent, size and axes | 11 11
Test Summary: | Pass Total
0-row DataFrame corner cases | 4 4
PASSED: dataframe.jl
Test Summary: | Pass Total
constructors | 23 23
Test Summary: | Pass Total
getindex and setindex! | 26 26
Test Summary: | Pass Total
equality | 17 17
Test Summary: | Pass Total
isless | 13 13
Test Summary: | Pass Total
hashing | 6 6
Test Summary: | Pass Total
grouping | 6 6
Test Summary: | Pass Total
getproperty, setproperty! and propertynames | 6 6
Test Summary: | Pass Total
keys, values and iteration, size | 21 21
Test Summary: | Pass Total
convert and copy | 6 6
Test Summary: | Pass Total
parent and parentindices | 8 8
Test Summary: | Pass Total
iteration and collect | 10 10
Test Summary: | Pass Total
duplicate column | 12 12
Test Summary: | Pass Total
conversion and push! | 15 15
Test Summary: | Pass Total
show | 7 7
PASSED: dataframerow.jl
Test Summary: | Pass Total
LaTeX export | 1 1
Test Summary: | Pass Total
Huge LaTeX export | 2 2
Test Summary: | Pass Total
HTML output | 3 3
Test Summary: | Pass Total
limit attribute | 2 2
Test Summary: | Pass Total
printtable | 1 1
Test Summary: | Pass Total
csv/tsv output | 2 2
PASSED: io.jl
Test Summary: | Pass Total
constructors | 42 42
Test Summary: | Pass Total
DataFrame keyword argument constructor | 22 22
Test Summary: | Pass Total
DataFrame constructor | 21 21
Test Summary: | Pass Total
pair constructor | 11 11
Test Summary: | Pass Total
associative | 9 9
Test Summary: | Pass Total
vector constructors | 58 58
Test Summary: | Pass Total
recyclers | 2 2
Test Summary: | Pass Total
constructor errors | 11 11
Test Summary: | Pass Total
column types | 3 3
Test Summary: | Pass Total
Matrix constructor | 4 4
Test Summary: | Pass Total
constructor with types | 19 19
PASSED: constructors.jl
FAILED: conversions.jl
LoadError: ArgumentError: Package DataStructures not found in current path:
- Run `import Pkg; Pkg.add("DataStructures")` to install the DataStructures package.
Stacktrace:
[1] top-level scope at C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\runtests.jl:44 [inlined]
[2] top-level scope at .\none:0
[3] include at .\boot.jl:326 [inlined]
[4] include_relative(::Module, ::String) at .\loading.jl:1038
[5] include(::Module, ::String) at .\sysimg.jl:29
[6] include(::String) at .\client.jl:403
[7] top-level scope at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:4
[8] include at .\boot.jl:326 [inlined]
[9] include_relative(::Module, ::String) at .\loading.jl:1038
[10] include(::Module, ::String) at .\sysimg.jl:29
[11] exec_options(::Base.JLOptions) at .\client.jl:267
[12] _start() at .\client.jl:436
in expression starting at C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\conversions.jl:4
PASSED: sort.jl
Test Summary: | Pass Total
parent | 1 1
Test Summary: | Pass Total
accepted columns | 2 2
Test Summary: | Pass Total
by, groupby and map(::Function, ::GroupedDataFrame) | 899 899
Test Summary: | Pass Total
grouping with missings | 980 980
Test Summary: | Pass Total
grouping with three keys | 1426 1426
Test Summary: | Pass Total
by, combine and map with pair interface | 374 374
Test Summary: | Pass Total
combine with aggregation functions | 421 421
Test Summary: | Pass Total
iteration protocol | 2 2
Test Summary: | Pass Total
getindex | 29 29
Test Summary: | Pass Total
== and isequal | 12 12
Test Summary: | Pass Total
show | 10 10
Test Summary: | Pass Total
DataFrame | 20 20
Test Summary: | Pass Total
groupindices and groupvars | 8 8
PASSED: grouping.jl
Test Summary: | Pass Total
join types | 20 20
Test Summary: | Pass Total
Test empty inputs 1 | 21 21
Test Summary: | Pass Total
Test empty inputs 2 | 21 21
Test Summary: | Pass Total
issue #960 | 3 3
Test Summary: | Pass Total
all joins | 30 30
Test Summary: | Pass Total
all joins with CategoricalArrays | 32 32
Test Summary: | Pass Total
maintain CategoricalArray levels ordering on join - non-`on` cols | 6 6
Test Summary: | Pass Total
maintain CategoricalArray levels ordering on join - ordering conflicts | 10 10
Test Summary: | Pass Total
maintain CategoricalArray levels ordering on join - left is categorical | 12 12
Test Summary: | Pass Total
join on columns with different left/right names | 36 36
Test Summary: | Pass Total
join with a column of type Any | 16 16
Test Summary: | Pass Total
joins with categorical columns and no matching rows | 24 24
Test Summary: | Pass Total
indicator columns | 4 4
Test Summary: | Pass Total
test checks of merge key uniqueness | 18 18
PASSED: join.jl
┌ Warning: `convert(::Type{Array}, dfr::DataFrameRow)` is deprecated, use `permutedims(Vector(dfr))` instead.
│ caller = (::getfield(Main.TestIteration, Symbol("##1#2")))(::DataFrameRow{DataFrame,DataFrames.Index}) at none:0
└ @ Main.TestIteration .\none:0
┌ Warning: `map(f::Union{Function, Type}, dfc::DataFrameColumns{<:AbstractDataFrame, Pair{Symbol, AbstractVector}})` is deprecated, use `mapcols(f, dfc.df)` instead.
│ caller = top-level scope at none:0
└ @ Core none:0
┌ Warning: `map(f::Union{Function, Type}, dfc::DataFrameColumns{<:AbstractDataFrame, Pair{Symbol, AbstractVector}})` is deprecated, use `mapcols(f, dfc.df)` instead.
│ caller = top-level scope at none:0
└ @ Core none:0
Test Summary: | Pass Total
SubDataFrame | 7 7
Test Summary: | Pass Total
parent mutation | 4 4
PASSED: iteration.jl
Test Summary: | Pass Total
nonunique | 7 7
PASSED: duplicates.jl
Test Summary: | Pass Total
Basic show test with allrows and allcols | 9 9
Test Summary: | Pass Total
displaysize test | 4 4
Test Summary: | Pass Total
IOContext parameters test | 2 2
Test Summary: | Pass Total
SubDataFrame show test | 1 1
Test Summary: | Pass Total
Test showing StackedVector and RepeatedVector | 3 3
Test Summary: | Pass Total
Test colors and non-standard values: missing and nothing | 3 3
Test Summary: | Pass Total
Test correct width computation | 1 1
Test Summary: | Pass Total
Test showing special types: strings with escapes, categorical and BigFloat | 3 3
Test Summary: | Pass Total
Test using :compact parameter of IOContext | 2 2
PASSED: show.jl
Test Summary: | Pass Total
copy - SubDataFrame | 4 4
Test Summary: | Pass Total
view -- DataFrame | 53 53
Test Summary: | Pass Total
view -- SubDataFrame | 48 48
Test Summary: | Pass Total
getproperty, setproperty! and propertynames | 10 10
Test Summary: | Pass Total
index | 10 10
Test Summary: | Pass Total
dump | 1 1
Test Summary: | Pass Total
deleterows! | 1 1
Test Summary: | Pass Total
parent | 4 4
Test Summary: | Pass Total
duplicate column | 6 6
Test Summary: | Pass Total
conversion to DataFrame | 12 12
PASSED: subdataframe.jl
Test Summary: | Pass Total
Tables | 45 45
Test Summary: | Pass Total
DataFrame! | 9 9
PASSED: tables.jl
FAILED: tabletraits.jl
LoadError: ArgumentError: Package DataValues not found in current path:
- Run `import Pkg; Pkg.add("DataValues")` to install the DataValues package.
Stacktrace:
[1] top-level scope at C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\runtests.jl:44 [inlined]
[2] top-level scope at .\none:0
[3] include at .\boot.jl:326 [inlined]
[4] include_relative(::Module, ::String) at .\loading.jl:1038
[5] include(::Module, ::String) at .\sysimg.jl:29
[6] include(::String) at .\client.jl:403
[7] top-level scope at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:4
[8] include at .\boot.jl:326 [inlined]
[9] include_relative(::Module, ::String) at .\loading.jl:1038
[10] include(::Module, ::String) at .\sysimg.jl:29
[11] exec_options(::Base.JLOptions) at .\client.jl:267
[12] _start() at .\client.jl:436
in expression starting at C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\tabletraits.jl:3
Test Summary: | Pass Total
getindex DataFrame | 29 29
Test Summary: | Pass Total
getindex df[col] and df[cols] | 4 4
Test Summary: | Pass Total
view DataFrame | 28 28
Test Summary: | Pass Total
getindex SubDataFrame | 26 26
Test Summary: | Pass Total
view SubDataFrame | 28 28
Test Summary: | Pass Total
getindex DataFrameRow | 6 6
Test Summary: | Pass Total
view DataFrameRow | 7 7
PASSED: indexing.jl
┌ Warning: sort(df, cols=cols) is deprecated, use sort(df, cols) instead
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: sort!(df, cols=cols) is deprecated, use sort!(df, cols) instead
│ caller = ip:0x0
└ @ Core :-1
Test Summary: | Pass Total
identifier | 6 6
┌ Warning: Unable to validate reserved words against parser.
│ Expected if Julia was not built from source. = "Expected if Julia was not built from source."
└ @ Main.TestDeprecated C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:48
Test Summary: |
reserved words | No tests
┌ Warning: combine(gd) is deprecated, use DataFrame(gd) instead
│ caller = top-level scope at none:0
└ @ Core none:0
┌ Warning: `DataFrame` constructor with `categorical` positional argument is deprecated. Instead use `DataFrame(columns, names)` constructor.
│ caller = top-level scope at deprecated.jl:60
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:60
┌ Warning: `DataFrame` constructor with `categorical` positional argument is deprecated. Instead use `DataFrame(columns, names)` constructor.
│ caller = top-level scope at deprecated.jl:63
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:63
Test Summary: | Pass Total
categorical constructor | 3 3
┌ Warning: `DataFrame(t::Type, nrows::Integer, ncols::Integer)` is deprecated, use `DataFrame(Matrix{t}(undef, nrows, ncols))` instead.
│ caller = top-level scope at deprecated.jl:67
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:67
┌ Warning: `DataFrame(column_eltypes::AbstractVector{<:Type}, nrows::Integer)` is deprecated, use `DataFrame(column_eltypes, Symbol.('x' .* string.(1:length(column_eltypes))), nrows)` instead.
│ caller = top-level scope at deprecated.jl:83
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:83
┌ Warning: `DataFrame` constructor with `categorical` positional argument is deprecated. Instead use `DataFrame(columns, names)` constructor.
│ caller = top-level scope at deprecated.jl:99
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:99
Test Summary: | Pass Total
DataFrame constructors | 42 42
┌ Warning: `DataFrame(t::Type, nrows::Integer, ncols::Integer)` is deprecated, use `DataFrame(Matrix{t}(undef, nrows, ncols))` instead.
│ caller = top-level scope at none:0
└ @ Core none:0
┌ Warning: `DataFrame(column_eltypes::AbstractVector{<:Type}, nrows::Integer)` is deprecated, use `DataFrame(column_eltypes, Symbol.('x' .* string.(1:length(column_eltypes))), nrows)` instead.
│ caller = top-level scope at none:0
└ @ Core none:0
┌ Warning: `colwise(f, d::AbstractDataFrame)` is deprecated, use `[f(col) for col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:132
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:132
┌ Warning: `colwise(f, d::AbstractDataFrame)` is deprecated, use `[f(col) for col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:138
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:138
┌ Warning: `colwise(f, gd::GroupedDataFrame)` is deprecated, use `[[f(col) for col = eachcol(d)] for d = gd]` instead.
│ caller = top-level scope at deprecated.jl:147
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:147
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, d::AbstractDataFrame)` is deprecated, use `[f(col) for f = fns, col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:151
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:151
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, d::AbstractDataFrame)` is deprecated, use `[f(col) for f = fns, col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:157
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:157
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, d::AbstractDataFrame)` is deprecated, use `[f(col) for f = fns, col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:163
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:163
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, d::AbstractDataFrame)` is deprecated, use `[f(col) for f = fns, col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:169
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:169
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, gd::GroupedDataFrame)` is deprecated, use `[[f(col) for f = fns, col = eachcol(d)] for d = gd]` instead.
│ caller = top-level scope at deprecated.jl:174
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:174
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, d::AbstractDataFrame)` is deprecated, use `[f(col) for f = fns, col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:178
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:178
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, d::AbstractDataFrame)` is deprecated, use `[f(col) for f = fns, col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:184
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:184
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, d::AbstractDataFrame)` is deprecated, use `[f(col) for f = fns, col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:190
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:190
┌ Warning: `colwise(fns::Union{AbstractVector, Tuple}, d::AbstractDataFrame)` is deprecated, use `[f(col) for f = fns, col = eachcol(d)]` instead.
│ caller = top-level scope at deprecated.jl:197
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:197
┌ Warning: `colwise(f, gd::GroupedDataFrame)` is deprecated, use `[[f(col) for col = eachcol(d)] for d = gd]` instead.
│ caller = top-level scope at deprecated.jl:202
└ @ Core C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\deprecated.jl:202
Test Summary: | Pass Total
colwise | 29 29
PASSED: deprecated.jl
┌ Warning: Snoop file errored. Precompile statements were recorded untill error!
│ exception =
│ LoadError: "Tests failed"
│ in expression starting at C:\Users\cstamas\.julia\packages\DataFrames\m9gd9\test\runtests.jl:50
└ @ Main C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:6
warnings: error parsing Int64 on row = 1, col = 1: "abc
", error=INVALID: SENTINEL | NEWLINE | EOF | INVALID_DELIMITER
testing test_utf8_with_BOM.csv
testing test_utf8.csv
testing test_windows.csv
testing test_single_column.csv
testing test_empty_file.csv
testing test_empty_file_newlines.csv
testing test_simple_quoted.csv
testing test_quoted_delim_and_newline.csv
testing test_quoted_numbers.csv
testing test_crlf_line_endings.csv
testing test_newline_line_endings.csv
testing test_mac_line_endings.csv
testing test_no_header.csv
testing test_2_footer_rows.csv
testing test_dates.csv
testing test_excel_date_formats.csv
testing test_datetimes.csv
testing test_missing_value_NULL.csv
testing test_missing_value_NULL.csv
testing test_missing_value.csv
testing test_header_range.csv
testing test_header_int_list.csv
testing test_basic.csv
testing test_basic_pipe.csv
testing test_tab_null_empty.txt
testing test_tab_null_string.txt
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=5, maxsize=Inf, ptr=1, mark=-1)
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=0, maxsize=Inf, ptr=1, mark=-1)
testing dash_as_null.csv
testing plus_as_null.csv
testing comma_decimal.csv
testing double_quote_quotechar_and_escapechar.csv
testing census.txt
testing bools.csv
testing attenu.csv
testing test_null_only_column.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=20, maxsize=Inf, ptr=1, mark=-1)
testing categorical.csv
testing categorical.csv
testing categorical.csv
testing categorical.csv
testing baseball.csv
testing FL_insurance_sample.csv
testing FL_insurance_sample.csv
testing SacramentocrimeJanuary2006.csv
testing Sacramentorealestatetransactions.csv
testing SalesJan2009.csv
testing stocks.csv
testing TechCrunchcontinentalUSA.csv
testing Fielding.csv
testing latest (1).csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=16, maxsize=Inf, ptr=1, mark=-1)
testing issue_198.csv
testing issue_198_part2.csv
warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
warning: parsed expected 3 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
testing issue_207.csv
testing issue_120.csv
testing pandas_zeros.csv
testing transposed.csv
testing transposed_1row.csv
testing transposed_emtpy.csv
testing transposed_extra_newline.csv
testing transposed_noheader.csv
testing transposed_noheader.csv
testing test_utf8.csv
testing test_utf8.csv
testing test_multiple_missing.csv
testing test_openclosequotes.csv
testing test_truestrings.csv
testing test_truestrings.csv
testing test_string_delimiters.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=20, maxsize=Inf, ptr=1, mark=-1)
testing test_basic.csv
testing test_basic.csv
testing test_truestrings.csv
testing test_repeated_delimiters.csv
testing test_comments1.csv
testing test_comments_multiple.csv
testing test_comments_multichar.csv
testing test_not_enough_columns.csv
warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
testing test_correct_trailing_missings.csv
testing norwegian_data.csv
testing test_duplicate_columnnames.csv
testing test_bad_datetime.csv
testing test_types.csv
testing test_issue_326.wsv
testing test_missing_last_field.csv
testing test_delim.tsv
testing test_delim.wsv
testing test_comment_first_row.csv
testing test_comment_first_row.csv
testing test_repeated_delim_371.csv
testing test_file_issue_154.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=16, maxsize=Inf, ptr=1, mark=-1)
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=19, maxsize=Inf, ptr=1, mark=-1)
warning: parsed expected 1 columns, but didn't reach end of line on data row: 1. Ignoring any extra columns on this row
warning: parsed expected 1 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=19, maxsize=Inf, ptr=1, mark=-1)
warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=43, maxsize=Inf, ptr=1, mark=-1)
warning: parsed expected 5 columns, but didn't reach end of line on data row: 1. Ignoring any extra columns on this row
warning: parsed expected 5 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
warning: parsed expected 5 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=17, maxsize=Inf, ptr=1, mark=-1)
testing heat_flux.dat
testing log001_vehicle_status_flags_0.txt
testing fecal_samples.csv
header is: 1, datarow computed as: 2
Char(attempted_delim) = ','
bvc.counts[Int(attempted_delim)] = 380
nlines = 10
smallest line detected with 270 bytes
estimated rows: 748
detected delimiter: ","
column names detected: Symbol[:SampleID, :Mother_Child, :SubjectID, :MaternalID, :TimePoint, :Fecal_EtOH, :CollectionRep, :DOC, :RAInitials_DOC, :DOF, :RAInitials_DOF, :Date_Brought_In, :RAInitials_Brought, :Date_Shipped, :RAInitials_Shipped, :Date_Aliquoted, :Number_Replicates, :RAInitials_Aliquot, :StorageBox, :DOE, :Extract_number, :AliquotRep, :DNABox, :KitUsed, :RAInitials_Extract, :DNAConc, :DOM, :Mgx_processed, :Mgx_batch, :DO16S, :_16S_processed, :_16S_batch, :_16S_plate, :Notes, :Discrepancies, :Batch_1_Mapping, :Mgx_batch_Mapping, :_16S_batch_Mapping, :Mother_Child_Dyads]
byte position of data computed at: 481
computed typecodes are: Int8[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
warning: didn't pre-allocate enough tape while parsing, re-allocating...
warning: didn't pre-allocate enough tape while parsing, re-allocating...
time for initial parsing to tape: 0.005000114440917969
types after parsing: Type[String, PooledString, Int64, String, Int64, PooledString, Int64, Date, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Float64}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, String}, Union{Missing, PooledString}, Union{Missing, String}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Int64}], pool = 0.1
warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
Test Summary: | Pass Total
CSV | 978 978
ERROR: LoadError: LoadError: ArgumentError: Package MultiScaleArrays [f9640e96-87f6-5992-9c3b-0743c6a49ffa] is required but does not seem to be installed:
- Run `Pkg.instantiate()` to install all recorded dependencies.
Stacktrace:
[1] _require(::Base.PkgId) at .\loading.jl:929
[2] require(::Base.PkgId) at .\loading.jl:858
[3] top-level scope at none:0
[4] include at .\boot.jl:326 [inlined]
[5] include_relative(::Module, ::String) at .\loading.jl:1038
[6] include at .\sysimg.jl:29 [inlined]
[7] include(::String) at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:16
[8] top-level scope at none:0
[9] include at .\boot.jl:326 [inlined]
[10] include_relative(::Module, ::String) at .\loading.jl:1038
[11] include(::Module, ::String) at .\sysimg.jl:29
[12] exec_options(::Base.JLOptions) at .\client.jl:267
[13] _start() at .\client.jl:436
in expression starting at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\packages\incremental_precompile.jl:6
in expression starting at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl:18
ERROR: failed process: Process(`'C:\Users\cstamas\AppData\Local\Julia-1.1.1\bin\julia.exe' --optimize=3 '--output-o=C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\sys.a' -g1 --track-allocation=none --startup-file=no --code-coverage=none --history-file=yes --inline=yes --math-mode=ieee --handle-signals=yes --warn-overwrite=no --compile=yes --depwarn=yes --cpu-target=native --track-allocation=none --sysimage-native-code=yes '--sysimage=C:\Users\cstamas\AppData\Local\Julia-1.1.1\lib\julia\sys.dll' -g1 --compiled-modules=yes --optimize=2 'C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\sysimg\run_julia_code.jl'`, ProcessExited(1)) [1]
Stacktrace:
[1] error(::String, ::Base.Process, ::String, ::Int64, ::String) at .\error.jl:42
[2] pipeline_error at .\process.jl:785 [inlined]
[3] #run#515(::Bool, ::Function, ::Cmd) at .\process.jl:726
[4] run at .\process.jl:724 [inlined]
[5] #run_julia#1 at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\src\compiler_flags.jl:225 [inlined]
[6] #run_julia at .\none:0 [inlined]
[7] #compile_incremental#57(::Bool, ::Bool, ::Bool, ::Nothing, ::Function, ::String) at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\src\incremental.jl:137
[8] compile_incremental at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\src\incremental.jl:134 [inlined]
[9] #compile_incremental#58(::Base.Iterators.Pairs{Symbol,Bool,Tuple{Symbol},NamedTuple{(:install,),Tuple{Bool}}}, ::Function, ::Symbol, ::Vararg{Symbol,N} where N) at C:\Users\cstamas\.julia\packages\PackageCompiler\oX5Ij\src\incremental.jl:178
[10] (::getfield(PackageCompiler, Symbol("#kw##compile_incremental")))(::NamedTuple{(:install,),Tuple{Bool}}, ::typeof(compile_incremental), ::Symbol, ::Symbol, ::Vararg{Symbol,N} where N) at .\none:0
[11] top-level scope at none:0
(makie_precompile) pkg> st
Status `C:\Users\cstamas\Documents\Coding\makie_precompile\Project.toml`
[537997a7] AbstractPlotting v0.9.7 #master (https://github.com/JuliaPlots/AbstractPlotting.jl.git)
[70588ee8] CSSUtil v0.1.0
[336ed68f] CSV v0.5.5
[324d7699] CategoricalArrays v0.5.2
[35d6a980] ColorSchemes v3.2.0
[a93c6f00] DataFrames v0.18.2
[864edb3b] DataStructures v0.15.0
[e7dc6d0d] DataValues v0.4.7
[31c24e10] Distributions v0.20.0
[e30172f5] Documenter v0.22.4
[5789e2e9] FileIO v1.0.6
[add2ef01] GDAL v0.2.0
[f7f18e0c] GLFW v2.3.0
[e9467ef8] GLMakie v0.0.5 #master (https://github.com/JuliaPlots/GLMakie.jl.git)
[a09fc81d] ImageCore v0.8.3
[6a3955dd] ImageFiltering v0.6.2
[6218d12a] ImageMagick v0.7.3
[4e3cecfd] ImageShow v0.2.0
[02fcd773] ImageTransformations v0.8.0
[c601a237] Interact v0.10.2
[7408c33d] JSCall v0.1.0
[b964fa9f] LaTeXStrings v1.0.3
[ee78f7c6] Makie v0.9.3 #master (https://github.com/JuliaPlots/Makie.jl.git)
[dbd62bd0] MakieGallery v0.0.7+ #master (https://github.com/JuliaPlots/MakieGallery.jl.git)
[e296ed71] MakieThemes v0.0.2
[7269a6da] MeshIO v0.3.1
[66fc600b] ModernGL v1.0.0
[6fe1bfb0] OffsetArrays v0.11.0
[9b87118b] PackageCompiler v0.6.3+ #sd-notomls (https://github.com/JuliaLang/PackageCompiler.jl.git)
[1a8c2f83] Query v0.11.0
[2aef5ad7] QueryOperators v0.8.0
[ce6b1742] RDatasets v0.6.1
[276daf66] SpecialFunctions v0.7.2
[2913bbd2] StatsBase v0.30.0
[65254759] StatsMakie v0.0.5
[3eaba693] StatsModels v0.5.0
[09ab397b] StructArrays v0.4.0 #master (https://github.com/piever/StructArrays.jl.git)
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.4
[ea10d353] WeakRefStrings v0.6.1
[0f1e0344] WebIO v0.8.1+ #sd-httpheader (https://github.com/JuliaGizmos/WebIO.jl.git)
[104b5d7c] WebSockets v1.5.2
[a5390f91] ZipFile v0.8.1
[ade2ca70] Dates
[9a3f8284] Random
[8dfed614] Test
julia> versioninfo()
Julia Version 1.1.1
Commit 55e36cc308 (2019-05-16 04:10 UTC)
Platform Info:
OS: Windows (x86_64-w64-mingw32)
CPU: Intel(R) Core(TM) i7-3632QM CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-6.0.1 (ORCJIT, ivybridge)
julia>
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