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---
title: Checking Reveal.js
author: Ramnath Vaidyanathan
mode : selfcontained
framework: revealjs
hitheme : zenburn
revealjs:
theme: default
transition: none
center: "true"
url: {lib: "."}
bootstrap:
theme: amelia
widgets: mathjax
navbar:
title: Slidify
items:
- {item: Home, href: index, icon: home}
- {item: "Start", href: start, icon: signin}
- {item: Author, href: about, icon: pencil}
- {item: Style, href: style, icon: hand-right, class: dropdown,
dropdown: true, menu: [
{item: io2012, href: 'samples/intro'},
{item: deck.js, href: 'samples/deck.js'},
{item: shower, href: 'samples/shower'},
{item: landslide, href: 'samples/landslide'}
]
}
- {item: Customize, href: customize, icon: gift}
- {item: Extend, href: extend, icon: cogs}
- {item: Publish, href: publish, icon: github}
---
<script type="text/x-mathjax-config">
MathJax.Hub.Config({
tex2jax: {
inlineMath: [['$','$'], ['\\(','\\)']],
processEscapes: true
}
});
</script>
<script src="https://c328740.ssl.cf1.rackcdn.com/mathjax/2.0-latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML">
</script>
<script>
window.MathJax || document.write('<script type="text/x-mathjax-config">MathJax.Hub.Config({"HTML-CSS":{imageFont:null}});<
\/script><script src="{{url.widgets}}/mathjax/MathJax.js?config=TeX-AMS-MML_HTMLorMML"><\/script>')
</script>
---
## Stochastic kinetic models
A biochemical network is represented as a set of pseudo-biochemical reactions ($u$ species \& $v$ reactions)
$$
R_i: p_{11}
$$
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