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Canberra reproducibility talk
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Title: Openness and reproducibility in computational science: tools, | |
approaches, and thought patterns. | |
Oct 17, NICTA, Canberra. | |
Abstract: | |
Computational reproducibility should be relatively straightforward to achieve | |
at the time of publication, but experience has shown that most research | |
groups struggle with it. I will discuss the increasingly rich (and | |
unfortunately) complex ecosystem of tools in this area, and show how we | |
are mixing open science approaches with fairly simple tools to drive | |
replication and encourage reuse/remixing of our research software. | |
Bio: | |
While Titus has many diverse research interests, a goal of his lab is to | |
combine computation with experiment in order to improve our understanding of | |
gene function. The development and extension of data analysis tools and | |
toolkits is also an increasingly large interest of his lab. His group works | |
across developmental biology, molecular biology, bioinformatics, metagenomics | |
and next-generation sequencing. Titus has been an advocate of open-source | |
software and open science for decades, and he is committed to using novel | |
computer science tools to explore large genomic sequencing data sets. Titus | |
holds a PhD from the California Institute of Technology, and he will be moving | |
to UC Davis in January 2015, where he will lead the Laboratory of Data | |
Intensive Biology. | |
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