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@cth
cth / vcf2bed.pl
Last active November 11, 2015 12:21 — forked from mlawson/vcf2bed.pl
Converts a vcf file (typically of indels) into a bed file
#!/usr/bin/perl
use strict;
if (scalar @ARGV != 1) {
print "vcf2bed.pl <vcf_file>\n";
exit 1;
}
my $vcfFile = $ARGV[0];
@cth
cth / README.md
Last active February 22, 2016 09:03 — forked from anonymous/README.md

Markdown based testing of files

This is a markdown based language for specification of testcases for files in a filesystem. Ideally a set of files may be described and at the same time formal specifications about the files can be specified using test cases written in, e.g., shell scripts embedded as code-blocks.

Overview