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from openai import OpenAI

client = OpenAI()

response = client.chat.completions.create(
  model="gpt-4-turbo",
  messages=[
    {
      "role": "user",
      "content": [

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Use GitHub Copilot in the command line.

pip uninstall gh
brew install gh
gh auth login
gh extension install github/gh-copilot
gh extension upgrade gh-copilot
gh copilot suggest 'read text file line by line and return the total number of alphanum chars in each line'

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Change the number of columns and rows on the launchpad grid.

defaults write com.apple.dock springboard-columns -int 8
defaults write com.apple.dock springboard-rows -int 8
defaults write com.apple.dock ResetLaunchPad -bool TRUE
killall Dock

Use Default to reset.

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# tinygrad implementation: https://github.com/tinygrad/tinygrad/blob/master/examples/beautiful_mnist.py
%time
import torch
import torch.nn as nn
import torch.optim as optim
from torchvision import datasets
import torchvision.transforms as transforms
from torch.utils.data import DataLoader
from tqdm import trange

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# install nougat
pip install "nougat-ocr[api, dataset]"
# crop the table from paper (preserve pdf)
# using default 0.1.0-small model
nougat /tmp/2304.08485.table3.only.pdf -o /tmp/" --markdown

\begin{table}

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#!/usr/bin/bash

# ClinVar weekly updates: https://ftp.ncbi.nlm.nih.gov/pub/clinvar/tab_delimited/
# Download assembly-specific variant annotation (Release date: 2022-09-19)
wget https://ftp.ncbi.nlm.nih.gov/pub/clinvar/tab_delimited/variant_summary.txt.gz

awk '{print "\t"$0"\t"}' acmg.filtered.genes.list \| 
rg -zf - variant_summary.txt.gz \| 
rg 'GRCh38' \| 
rg 'single nucleotide variant' \| 

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# check the ports
# openssl s_client -connect ega.ebi.ac.uk:8443
# openssl s_client -connect ega.ebi.ac.uk:8052

# pyEGA3 - EGA python client version 3.4.0
# Python version - 3.7.3

pyega3 -cf default_credential_file.json fetch EGAF00001383154
pyega3 -cf default_credential_file.json fetch EGAD00001000440 --saveto Desktop/ega_output/