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October 23, 2014 11:56
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log from running `brew install sailfish -v`
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| $ brew install sailfish -v | |
| tbb: OS X Lion or newer is required. | |
| ==> Downloading https://github.com/kingsfordgroup/sailfish/releases/download/v0.6.2/Sailfish-0.6.2-Source.tar.gz | |
| Already downloaded: /home/kleve/.cache/Homebrew/sailfish-0.6.2.tar.gz | |
| ==> Verifying sailfish-0.6.2.tar.gz checksum | |
| tar xf /home/kleve/.cache/Homebrew/sailfish-0.6.2.tar.gz | |
| ==> cmake .. -DCMAKE_INSTALL_PREFIX=/gulo/glob/kleve/private/linuxbrew/Cellar/sailfish/0.6.2 -DCMAKE_BUILD_TYPE=None -DCMAKE_FIND_FRAMEWORK=LAST -DCMAKE_VERBOSE_MAKEFILE=ON -Wno-dev | |
| -- The C compiler identification is GNU 4.9.1 | |
| -- The CXX compiler identification is GNU 4.9.1 | |
| -- Check for working C compiler: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 | |
| -- Check for working C compiler: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -- works | |
| -- Detecting C compiler ABI info | |
| -- Detecting C compiler ABI info - done | |
| -- Check for working CXX compiler: /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 | |
| -- Check for working CXX compiler: /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 -- works | |
| -- Detecting CXX compiler ABI info | |
| -- Detecting CXX compiler ABI info - done | |
| -- Boost version: 1.56.0 | |
| -- Found the following Boost libraries: | |
| -- iostreams | |
| -- filesystem | |
| -- system | |
| -- thread | |
| -- timer | |
| -- program_options | |
| -- serialization | |
| BOOST INCLUDE DIR = /gulo/glob/kleve/private/linuxbrew/include | |
| BOOST INCLUDE DIRS = /gulo/glob/kleve/private/linuxbrew/include | |
| BOOST LIB DIR = /gulo/glob/kleve/private/linuxbrew/lib | |
| BOOST LIBRAREIS = /gulo/glob/kleve/private/linuxbrew/lib/libboost_iostreams-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_filesystem-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_system-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_thread-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_timer-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_program_options-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_serialization-mt.so | |
| -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.3") | |
| Build system will fetch and build CMPH | |
| ================================================================== | |
| Build system will fetch and build Jellyfish | |
| ================================================================== | |
| ERROR: Intel TBB NOT found! | |
| -- Looked for Threading Building Blocks in /opt/intel/tbb;/usr/local/include;/usr/include | |
| Build system will fetch and build Intel Threading Building Blocks | |
| ================================================================== | |
| TBB_LIBRARIES = /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libtbb.so;/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libtbbmalloc.so | |
| Build system will fetch and build Shark machine learning library | |
| ================================================================== | |
| CPACK_SOURCE_IGNORE_FILES = /src/PCA.cpp;/src/PCAUtils.cpp;/build/;/scripts/AggregateToGeneLevel.py;/scripts/ExpressionTools.py;/scripts/GenerateExpressionFiles.sh;/scripts/ParseSoftFile.py;/scripts/PlotCorrelation.py;/scripts/junk;/scripts/sfstrace.log;/scripts/SFPipeline.py;/bin/;/lib/;/sample_data/;PublishREADMEToWebsite.sh;/external/;/src/obsolete/;/include/obsolete/;WebsiteHeader.txt;/experimental_configs/;.git/ | |
| TBB_LIBRARIES = /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libtbb.so;/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libtbbmalloc.so | |
| Boost_LIBRARIES = /gulo/glob/kleve/private/linuxbrew/lib/libboost_iostreams-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_filesystem-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_system-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_thread-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_timer-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_program_options-mt.so;/gulo/glob/kleve/private/linuxbrew/lib/libboost_serialization-mt.so | |
| -- Configuring done | |
| -- Generating done | |
| -- Build files have been written to: /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build | |
| ==> make install | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -H/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source -B/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build --check-build-system CMakeFiles/Makefile.cmake 0 | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_start /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles/progress.marks | |
| make -f CMakeFiles/Makefile2 all | |
| make[1]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| make -f CMakeFiles/libcmph.dir/build.make CMakeFiles/libcmph.dir/depend | |
| make[2]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles/libcmph.dir/DependInfo.cmake --color= | |
| Scanning dependencies of target libcmph | |
| make[2]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| make -f CMakeFiles/libcmph.dir/build.make CMakeFiles/libcmph.dir/build | |
| make[2]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 4 | |
| [ 2%] Creating directories for 'libcmph' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0 | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0 | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/tmp | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/libcmph-mkdir | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 5 | |
| [ 4%] Performing download step (download, verify and extract) for 'libcmph' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/download-libcmph.cmake | |
| -- downloading... | |
| src='http://www.cs.cmu.edu/~robp/files/cmph-2.0.tar.gz' | |
| dst='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0.tar.gz' | |
| timeout='none' | |
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| -- downloading... done | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/verify-libcmph.cmake | |
| -- verifying file... | |
| file='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0.tar.gz' | |
| -- verifying file... warning: did not verify file - no URL_HASH specified? | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/extract-libcmph.cmake | |
| -- extracting... | |
| src='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0.tar.gz' | |
| dst='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| -- extracting... [tar xfz] | |
| -- extracting... [analysis] | |
| -- extracting... [rename] | |
| -- extracting... [clean up] | |
| -- extracting... done | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/libcmph-download | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 7 | |
| [ 6%] No patch step for 'libcmph' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/libcmph-patch | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 6 | |
| [ 8%] No update step for 'libcmph' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/libcmph-update | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 8 | |
| [ 10%] Performing configure step for 'libcmph' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0 && /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/configure --prefix=/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking whether build environment is sane... yes | |
| checking for a thread-safe mkdir -p... /bin/mkdir -p | |
| checking for gawk... gawk | |
| checking whether make sets $(MAKE)... yes | |
| checking for gawk... (cached) gawk | |
| checking for gcc... /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 accepts -g... yes | |
| checking for /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 option to accept ISO C89... none needed | |
| checking for style of include used by make... GNU | |
| checking dependency style of /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9... gcc3 | |
| checking whether ln -s works... yes | |
| checking build system type... x86_64-unknown-linux-gnu | |
| checking host system type... x86_64-unknown-linux-gnu | |
| checking how to print strings... printf | |
| checking for a sed that does not truncate output... /bin/sed | |
| checking for grep that handles long lines and -e... /bin/grep | |
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| checking for ld used by /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking the maximum length of command line arguments... 3458764513820540925 | |
| checking whether the shell understands some XSI constructs... yes | |
| checking whether the shell understands "+="... yes | |
| checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for ar... ar | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking command to parse /usr/bin/nm -B output from /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 object... ok | |
| checking for sysroot... no | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking how to run the C preprocessor... /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
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| checking for objdir... .libs | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 supports -fno-rtti -fno-exceptions... yes | |
| checking for /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 option to produce PIC... -fPIC -DPIC | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 PIC flag -fPIC -DPIC works... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 static flag -static works... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 supports -c -o file.o... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 supports -c -o file.o... (cached) yes | |
| checking whether the /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... yes | |
| checking for getconf... getconf | |
| checking for CFLAGS value to request large file support... | |
| checking for LDFLAGS value to request large file support... | |
| checking for LIBS value to request large file support... | |
| checking for _FILE_OFFSET_BITS... no | |
| checking for _LARGEFILE_SOURCE... no | |
| checking for _LARGE_FILES... no | |
| checking getopt.h usability... yes | |
| checking getopt.h presence... yes | |
| checking for getopt.h... yes | |
| checking math.h usability... yes | |
| checking math.h presence... yes | |
| checking for math.h... yes | |
| checking for cos in -lm... yes | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 accepts -g... yes | |
| checking dependency style of /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9... gcc3 | |
| checking how to run the C++ preprocessor... /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 -E | |
| checking for ld used by /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 option to produce PIC... -fPIC -DPIC | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 PIC flag -fPIC -DPIC works... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 static flag -static works... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 supports -c -o file.o... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 supports -c -o file.o... (cached) yes | |
| checking whether the /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking if there is spoon... no | |
| configure: creating ./config.status | |
| config.status: creating Makefile | |
| config.status: creating src/Makefile | |
| config.status: creating cxxmph/Makefile | |
| config.status: creating tests/Makefile | |
| config.status: creating examples/Makefile | |
| config.status: creating man/Makefile | |
| config.status: creating cmph.pc | |
| config.status: creating cxxmph.pc | |
| config.status: creating config.h | |
| config.status: executing depfiles commands | |
| config.status: executing libtool commands | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0 && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/libcmph-configure | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 9 | |
| [ 12%] Performing build step for 'libcmph' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0 && make | |
| make[3]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| make all-recursive | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| Making all in src | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/src' | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT hash.lo -MD -MP -MF .deps/hash.Tpo -c -o hash.lo hash.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT hash.lo -MD -MP -MF .deps/hash.Tpo -c hash.c -fPIC -DPIC -o .libs/hash.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT hash.lo -MD -MP -MF .deps/hash.Tpo -c hash.c -o hash.o >/dev/null 2>&1 | |
| mv -f .deps/hash.Tpo .deps/hash.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT jenkins_hash.lo -MD -MP -MF .deps/jenkins_hash.Tpo -c -o jenkins_hash.lo jenkins_hash.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT jenkins_hash.lo -MD -MP -MF .deps/jenkins_hash.Tpo -c jenkins_hash.c -fPIC -DPIC -o .libs/jenkins_hash.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT jenkins_hash.lo -MD -MP -MF .deps/jenkins_hash.Tpo -c jenkins_hash.c -o jenkins_hash.o >/dev/null 2>&1 | |
| mv -f .deps/jenkins_hash.Tpo .deps/jenkins_hash.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT vstack.lo -MD -MP -MF .deps/vstack.Tpo -c -o vstack.lo vstack.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT vstack.lo -MD -MP -MF .deps/vstack.Tpo -c vstack.c -fPIC -DPIC -o .libs/vstack.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT vstack.lo -MD -MP -MF .deps/vstack.Tpo -c vstack.c -o vstack.o >/dev/null 2>&1 | |
| mv -f .deps/vstack.Tpo .deps/vstack.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT vqueue.lo -MD -MP -MF .deps/vqueue.Tpo -c -o vqueue.lo vqueue.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT vqueue.lo -MD -MP -MF .deps/vqueue.Tpo -c vqueue.c -fPIC -DPIC -o .libs/vqueue.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT vqueue.lo -MD -MP -MF .deps/vqueue.Tpo -c vqueue.c -o vqueue.o >/dev/null 2>&1 | |
| mv -f .deps/vqueue.Tpo .deps/vqueue.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT graph.lo -MD -MP -MF .deps/graph.Tpo -c -o graph.lo graph.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT graph.lo -MD -MP -MF .deps/graph.Tpo -c graph.c -fPIC -DPIC -o .libs/graph.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT graph.lo -MD -MP -MF .deps/graph.Tpo -c graph.c -o graph.o >/dev/null 2>&1 | |
| mv -f .deps/graph.Tpo .deps/graph.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph.lo -MD -MP -MF .deps/cmph.Tpo -c -o cmph.lo cmph.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph.lo -MD -MP -MF .deps/cmph.Tpo -c cmph.c -fPIC -DPIC -o .libs/cmph.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph.lo -MD -MP -MF .deps/cmph.Tpo -c cmph.c -o cmph.o >/dev/null 2>&1 | |
| mv -f .deps/cmph.Tpo .deps/cmph.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph_structs.lo -MD -MP -MF .deps/cmph_structs.Tpo -c -o cmph_structs.lo cmph_structs.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph_structs.lo -MD -MP -MF .deps/cmph_structs.Tpo -c cmph_structs.c -fPIC -DPIC -o .libs/cmph_structs.o | |
| cmph_structs.c: In function ‘__cmph_dump’: | |
| cmph_structs.c:27:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| cmph_structs.c: In function ‘__cmph_load’: | |
| cmph_structs.c:38:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph_structs.lo -MD -MP -MF .deps/cmph_structs.Tpo -c cmph_structs.c -o cmph_structs.o >/dev/null 2>&1 | |
| mv -f .deps/cmph_structs.Tpo .deps/cmph_structs.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chm.lo -MD -MP -MF .deps/chm.Tpo -c -o chm.lo chm.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chm.lo -MD -MP -MF .deps/chm.Tpo -c chm.c -fPIC -DPIC -o .libs/chm.o | |
| chm.c: In function ‘chm_dump’: | |
| chm.c:207:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| chm.c: In function ‘chm_load’: | |
| chm.c:243:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chm.lo -MD -MP -MF .deps/chm.Tpo -c chm.c -o chm.o >/dev/null 2>&1 | |
| mv -f .deps/chm.Tpo .deps/chm.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bmz.lo -MD -MP -MF .deps/bmz.Tpo -c -o bmz.lo bmz.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bmz.lo -MD -MP -MF .deps/bmz.Tpo -c bmz.c -fPIC -DPIC -o .libs/bmz.o | |
| bmz.c: In function ‘bmz_dump’: | |
| bmz.c:456:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| bmz.c: In function ‘bmz_load’: | |
| bmz.c:493:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bmz.lo -MD -MP -MF .deps/bmz.Tpo -c bmz.c -o bmz.o >/dev/null 2>&1 | |
| mv -f .deps/bmz.Tpo .deps/bmz.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bmz8.lo -MD -MP -MF .deps/bmz8.Tpo -c -o bmz8.lo bmz8.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bmz8.lo -MD -MP -MF .deps/bmz8.Tpo -c bmz8.c -fPIC -DPIC -o .libs/bmz8.o | |
| bmz8.c: In function ‘bmz8_dump’: | |
| bmz8.c:464:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| bmz8.c: In function ‘bmz8_load’: | |
| bmz8.c:499:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bmz8.lo -MD -MP -MF .deps/bmz8.Tpo -c bmz8.c -o bmz8.o >/dev/null 2>&1 | |
| mv -f .deps/bmz8.Tpo .deps/bmz8.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bdz.lo -MD -MP -MF .deps/bdz.Tpo -c -o bdz.lo bdz.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bdz.lo -MD -MP -MF .deps/bdz.Tpo -c bdz.c -fPIC -DPIC -o .libs/bdz.o | |
| bdz.c: In function ‘bdz_dump’: | |
| bdz.c:497:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| bdz.c: In function ‘bdz_load’: | |
| bdz.c:532:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bdz.lo -MD -MP -MF .deps/bdz.Tpo -c bdz.c -o bdz.o >/dev/null 2>&1 | |
| mv -f .deps/bdz.Tpo .deps/bdz.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bdz_ph.lo -MD -MP -MF .deps/bdz_ph.Tpo -c -o bdz_ph.lo bdz_ph.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bdz_ph.lo -MD -MP -MF .deps/bdz_ph.Tpo -c bdz_ph.c -fPIC -DPIC -o .libs/bdz_ph.o | |
| bdz_ph.c: In function ‘bdz_ph_dump’: | |
| bdz_ph.c:452:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| bdz_ph.c: In function ‘bdz_ph_load’: | |
| bdz_ph.c:482:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bdz_ph.lo -MD -MP -MF .deps/bdz_ph.Tpo -c bdz_ph.c -o bdz_ph.o >/dev/null 2>&1 | |
| mv -f .deps/bdz_ph.Tpo .deps/bdz_ph.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT brz.lo -MD -MP -MF .deps/brz.Tpo -c -o brz.lo brz.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT brz.lo -MD -MP -MF .deps/brz.Tpo -c brz.c -fPIC -DPIC -o .libs/brz.o | |
| brz.c: In function ‘brz_gen_mphf’: | |
| brz.c:235:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| brz.c: In function ‘brz_dump’: | |
| brz.c:566:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| brz.c: In function ‘brz_load’: | |
| brz.c:585:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT brz.lo -MD -MP -MF .deps/brz.Tpo -c brz.c -o brz.o >/dev/null 2>&1 | |
| mv -f .deps/brz.Tpo .deps/brz.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT fch.lo -MD -MP -MF .deps/fch.Tpo -c -o fch.lo fch.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT fch.lo -MD -MP -MF .deps/fch.Tpo -c fch.c -fPIC -DPIC -o .libs/fch.o | |
| fch.c: In function ‘fch_dump’: | |
| fch.c:319:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| fch.c: In function ‘fch_load’: | |
| fch.c:355:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT fch.lo -MD -MP -MF .deps/fch.Tpo -c fch.c -o fch.o >/dev/null 2>&1 | |
| mv -f .deps/fch.Tpo .deps/fch.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT fch_buckets.lo -MD -MP -MF .deps/fch_buckets.Tpo -c -o fch_buckets.lo fch_buckets.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT fch_buckets.lo -MD -MP -MF .deps/fch_buckets.Tpo -c fch_buckets.c -fPIC -DPIC -o .libs/fch_buckets.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT fch_buckets.lo -MD -MP -MF .deps/fch_buckets.Tpo -c fch_buckets.c -o fch_buckets.o >/dev/null 2>&1 | |
| mv -f .deps/fch_buckets.Tpo .deps/fch_buckets.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chd.lo -MD -MP -MF .deps/chd.Tpo -c -o chd.lo chd.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chd.lo -MD -MP -MF .deps/chd.Tpo -c chd.c -fPIC -DPIC -o .libs/chd.o | |
| chd.c: In function ‘chd_load’: | |
| chd.c:178:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| chd.c: In function ‘chd_dump’: | |
| chd.c:197:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chd.lo -MD -MP -MF .deps/chd.Tpo -c chd.c -o chd.o >/dev/null 2>&1 | |
| mv -f .deps/chd.Tpo .deps/chd.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chd_ph.lo -MD -MP -MF .deps/chd_ph.Tpo -c -o chd_ph.lo chd_ph.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chd_ph.lo -MD -MP -MF .deps/chd_ph.Tpo -c chd_ph.c -fPIC -DPIC -o .libs/chd_ph.o | |
| chd_ph.c: In function ‘chd_ph_load’: | |
| chd_ph.c:837:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| chd_ph.c: In function ‘chd_ph_dump’: | |
| chd_ph.c:868:18: warning: variable ‘nbytes’ set but not used [-Wunused-but-set-variable] | |
| register size_t nbytes; | |
| ^ | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT chd_ph.lo -MD -MP -MF .deps/chd_ph.Tpo -c chd_ph.c -o chd_ph.o >/dev/null 2>&1 | |
| mv -f .deps/chd_ph.Tpo .deps/chd_ph.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT miller_rabin.lo -MD -MP -MF .deps/miller_rabin.Tpo -c -o miller_rabin.lo miller_rabin.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT miller_rabin.lo -MD -MP -MF .deps/miller_rabin.Tpo -c miller_rabin.c -fPIC -DPIC -o .libs/miller_rabin.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT miller_rabin.lo -MD -MP -MF .deps/miller_rabin.Tpo -c miller_rabin.c -o miller_rabin.o >/dev/null 2>&1 | |
| mv -f .deps/miller_rabin.Tpo .deps/miller_rabin.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT buffer_manager.lo -MD -MP -MF .deps/buffer_manager.Tpo -c -o buffer_manager.lo buffer_manager.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT buffer_manager.lo -MD -MP -MF .deps/buffer_manager.Tpo -c buffer_manager.c -fPIC -DPIC -o .libs/buffer_manager.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT buffer_manager.lo -MD -MP -MF .deps/buffer_manager.Tpo -c buffer_manager.c -o buffer_manager.o >/dev/null 2>&1 | |
| mv -f .deps/buffer_manager.Tpo .deps/buffer_manager.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT buffer_entry.lo -MD -MP -MF .deps/buffer_entry.Tpo -c -o buffer_entry.lo buffer_entry.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT buffer_entry.lo -MD -MP -MF .deps/buffer_entry.Tpo -c buffer_entry.c -fPIC -DPIC -o .libs/buffer_entry.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT buffer_entry.lo -MD -MP -MF .deps/buffer_entry.Tpo -c buffer_entry.c -o buffer_entry.o >/dev/null 2>&1 | |
| mv -f .deps/buffer_entry.Tpo .deps/buffer_entry.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT select.lo -MD -MP -MF .deps/select.Tpo -c -o select.lo select.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT select.lo -MD -MP -MF .deps/select.Tpo -c select.c -fPIC -DPIC -o .libs/select.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT select.lo -MD -MP -MF .deps/select.Tpo -c select.c -o select.o >/dev/null 2>&1 | |
| mv -f .deps/select.Tpo .deps/select.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT compressed_seq.lo -MD -MP -MF .deps/compressed_seq.Tpo -c -o compressed_seq.lo compressed_seq.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT compressed_seq.lo -MD -MP -MF .deps/compressed_seq.Tpo -c compressed_seq.c -fPIC -DPIC -o .libs/compressed_seq.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT compressed_seq.lo -MD -MP -MF .deps/compressed_seq.Tpo -c compressed_seq.c -o compressed_seq.o >/dev/null 2>&1 | |
| mv -f .deps/compressed_seq.Tpo .deps/compressed_seq.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT compressed_rank.lo -MD -MP -MF .deps/compressed_rank.Tpo -c -o compressed_rank.lo compressed_rank.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT compressed_rank.lo -MD -MP -MF .deps/compressed_rank.Tpo -c compressed_rank.c -fPIC -DPIC -o .libs/compressed_rank.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT compressed_rank.lo -MD -MP -MF .deps/compressed_rank.Tpo -c compressed_rank.c -o compressed_rank.o >/dev/null 2>&1 | |
| mv -f .deps/compressed_rank.Tpo .deps/compressed_rank.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT linear_string_map.lo -MD -MP -MF .deps/linear_string_map.Tpo -c -o linear_string_map.lo linear_string_map.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT linear_string_map.lo -MD -MP -MF .deps/linear_string_map.Tpo -c linear_string_map.c -fPIC -DPIC -o .libs/linear_string_map.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT linear_string_map.lo -MD -MP -MF .deps/linear_string_map.Tpo -c linear_string_map.c -o linear_string_map.o >/dev/null 2>&1 | |
| mv -f .deps/linear_string_map.Tpo .deps/linear_string_map.Plo | |
| /bin/sh ../libtool --tag=CC --mode=compile /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph_benchmark.lo -MD -MP -MF .deps/cmph_benchmark.Tpo -c -o cmph_benchmark.lo cmph_benchmark.c | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph_benchmark.lo -MD -MP -MF .deps/cmph_benchmark.Tpo -c cmph_benchmark.c -fPIC -DPIC -o .libs/cmph_benchmark.o | |
| libtool: compile: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT cmph_benchmark.lo -MD -MP -MF .deps/cmph_benchmark.Tpo -c cmph_benchmark.c -o cmph_benchmark.o >/dev/null 2>&1 | |
| mv -f .deps/cmph_benchmark.Tpo .deps/cmph_benchmark.Plo | |
| /bin/sh ../libtool --tag=CC --mode=link /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -version-info 0:0:0 -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib -o libcmph.la -rpath /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib hash.lo jenkins_hash.lo vstack.lo vqueue.lo graph.lo cmph.lo cmph_structs.lo chm.lo bmz.lo bmz8.lo bdz.lo bdz_ph.lo brz.lo fch.lo fch_buckets.lo chd.lo chd_ph.lo miller_rabin.lo buffer_manager.lo buffer_entry.lo select.lo compressed_seq.lo compressed_rank.lo linear_string_map.lo cmph_benchmark.lo | |
| libtool: link: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -shared -fPIC -DPIC .libs/hash.o .libs/jenkins_hash.o .libs/vstack.o .libs/vqueue.o .libs/graph.o .libs/cmph.o .libs/cmph_structs.o .libs/chm.o .libs/bmz.o .libs/bmz8.o .libs/bdz.o .libs/bdz_ph.o .libs/brz.o .libs/fch.o .libs/fch_buckets.o .libs/chd.o .libs/chd_ph.o .libs/miller_rabin.o .libs/buffer_manager.o .libs/buffer_entry.o .libs/select.o .libs/compressed_seq.o .libs/compressed_rank.o .libs/linear_string_map.o .libs/cmph_benchmark.o -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath -Wl,/gulo/glob/kleve/private/linuxbrew/lib -Wl,-soname -Wl,libcmph.so.0 -o .libs/libcmph.so.0.0.0 | |
| libtool: link: (cd ".libs" && rm -f "libcmph.so.0" && ln -s "libcmph.so.0.0.0" "libcmph.so.0") | |
| libtool: link: (cd ".libs" && rm -f "libcmph.so" && ln -s "libcmph.so.0.0.0" "libcmph.so") | |
| libtool: link: ar cru .libs/libcmph.a hash.o jenkins_hash.o vstack.o vqueue.o graph.o cmph.o cmph_structs.o chm.o bmz.o bmz8.o bdz.o bdz_ph.o brz.o fch.o fch_buckets.o chd.o chd_ph.o miller_rabin.o buffer_manager.o buffer_entry.o select.o compressed_seq.o compressed_rank.o linear_string_map.o cmph_benchmark.o | |
| libtool: link: ranlib .libs/libcmph.a | |
| libtool: link: ( cd ".libs" && rm -f "libcmph.la" && ln -s "../libcmph.la" "libcmph.la" ) | |
| /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.c | |
| mv -f .deps/main.Tpo .deps/main.Po | |
| /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT wingetopt.o -MD -MP -MF .deps/wingetopt.Tpo -c -o wingetopt.o wingetopt.c | |
| mv -f .deps/wingetopt.Tpo .deps/wingetopt.Po | |
| /bin/sh ../libtool --tag=CC --mode=link /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib -o cmph main.o wingetopt.o libcmph.la | |
| libtool: link: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -Wl,-rpath -Wl,/gulo/glob/kleve/private/linuxbrew/lib -o .libs/cmph main.o wingetopt.o -L/gulo/glob/kleve/private/linuxbrew/lib ./.libs/libcmph.so -lm -Wl,-rpath -Wl,/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT bm_numbers.o -MD -MP -MF .deps/bm_numbers.Tpo -c -o bm_numbers.o bm_numbers.c | |
| mv -f .deps/bm_numbers.Tpo .deps/bm_numbers.Po | |
| /bin/sh ../libtool --tag=CC --mode=link /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib -o bm_numbers bm_numbers.o libcmph.la | |
| libtool: link: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -Wl,-rpath -Wl,/gulo/glob/kleve/private/linuxbrew/lib -o .libs/bm_numbers bm_numbers.o -L/gulo/glob/kleve/private/linuxbrew/lib ./.libs/libcmph.so -lm -Wl,-rpath -Wl,/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/src' | |
| Making all in tests | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/tests' | |
| /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -I../src/ -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT packed_mphf_tests.o -MD -MP -MF .deps/packed_mphf_tests.Tpo -c -o packed_mphf_tests.o packed_mphf_tests.c | |
| mv -f .deps/packed_mphf_tests.Tpo .deps/packed_mphf_tests.Po | |
| /bin/sh ../libtool --tag=CC --mode=link /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib -o packed_mphf_tests packed_mphf_tests.o ../src/libcmph.la | |
| libtool: link: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -Wl,-rpath -Wl,/gulo/glob/kleve/private/linuxbrew/lib -o .libs/packed_mphf_tests packed_mphf_tests.o -L/gulo/glob/kleve/private/linuxbrew/lib ../src/.libs/libcmph.so -lm -Wl,-rpath -Wl,/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -I../src/ -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT mphf_tests.o -MD -MP -MF .deps/mphf_tests.Tpo -c -o mphf_tests.o mphf_tests.c | |
| mv -f .deps/mphf_tests.Tpo .deps/mphf_tests.Po | |
| /bin/sh ../libtool --tag=CC --mode=link /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib -o mphf_tests mphf_tests.o ../src/libcmph.la | |
| libtool: link: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -Wl,-rpath -Wl,/gulo/glob/kleve/private/linuxbrew/lib -o .libs/mphf_tests mphf_tests.o -L/gulo/glob/kleve/private/linuxbrew/lib ../src/.libs/libcmph.so -lm -Wl,-rpath -Wl,/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/tests' | |
| Making all in examples | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/examples' | |
| /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -I../src/ -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT vector_adapter_ex1.o -MD -MP -MF .deps/vector_adapter_ex1.Tpo -c -o vector_adapter_ex1.o vector_adapter_ex1.c | |
| mv -f .deps/vector_adapter_ex1.Tpo .deps/vector_adapter_ex1.Po | |
| /bin/sh ../libtool --tag=CC --mode=link /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib -o vector_adapter_ex1 vector_adapter_ex1.o ../src/libcmph.la | |
| libtool: link: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -Wl,-rpath -Wl,/gulo/glob/kleve/private/linuxbrew/lib -o .libs/vector_adapter_ex1 vector_adapter_ex1.o -L/gulo/glob/kleve/private/linuxbrew/lib ../src/.libs/libcmph.so -lm -Wl,-rpath -Wl,/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -I../src/ -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT file_adapter_ex2.o -MD -MP -MF .deps/file_adapter_ex2.Tpo -c -o file_adapter_ex2.o file_adapter_ex2.c | |
| mv -f .deps/file_adapter_ex2.Tpo .deps/file_adapter_ex2.Po | |
| /bin/sh ../libtool --tag=CC --mode=link /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib -o file_adapter_ex2 file_adapter_ex2.o ../src/libcmph.la | |
| libtool: link: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -Wl,-rpath -Wl,/gulo/glob/kleve/private/linuxbrew/lib -o .libs/file_adapter_ex2 file_adapter_ex2.o -L/gulo/glob/kleve/private/linuxbrew/lib ../src/.libs/libcmph.so -lm -Wl,-rpath -Wl,/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -DHAVE_CONFIG_H -I. -I.. -I../src/ -isystem/gulo/glob/kleve/private/linuxbrew/include -Wall -MT struct_vector_adapter_ex3.o -MD -MP -MF .deps/struct_vector_adapter_ex3.Tpo -c -o struct_vector_adapter_ex3.o struct_vector_adapter_ex3.c | |
| mv -f .deps/struct_vector_adapter_ex3.Tpo .deps/struct_vector_adapter_ex3.Po | |
| /bin/sh ../libtool --tag=CC --mode=link /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -lm -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib -o struct_vector_adapter_ex3 struct_vector_adapter_ex3.o ../src/libcmph.la | |
| libtool: link: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -Wall -Wl,-rpath -Wl,/gulo/glob/kleve/private/linuxbrew/lib -o .libs/struct_vector_adapter_ex3 struct_vector_adapter_ex3.o -L/gulo/glob/kleve/private/linuxbrew/lib ../src/.libs/libcmph.so -lm -Wl,-rpath -Wl,/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/examples' | |
| Making all in man | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/man' | |
| make[5]: Nothing to be done for `all'. | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/man' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| make[3]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0 && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/libcmph-build | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 3 | |
| [ 14%] Performing install step for 'libcmph' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0 && make install | |
| make[3]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| Making install in src | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/src' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/src' | |
| test -z "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib" || /bin/mkdir -p "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib" | |
| /bin/sh ../libtool --mode=install /usr/bin/install -c libcmph.la '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib' | |
| libtool: install: /usr/bin/install -c .libs/libcmph.so.0.0.0 /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libcmph.so.0.0.0 | |
| libtool: install: (cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib && { ln -s -f libcmph.so.0.0.0 libcmph.so.0 || { rm -f libcmph.so.0 && ln -s libcmph.so.0.0.0 libcmph.so.0; }; }) | |
| libtool: install: (cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib && { ln -s -f libcmph.so.0.0.0 libcmph.so || { rm -f libcmph.so && ln -s libcmph.so.0.0.0 libcmph.so; }; }) | |
| libtool: install: /usr/bin/install -c .libs/libcmph.lai /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libcmph.la | |
| libtool: install: /usr/bin/install -c .libs/libcmph.a /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libcmph.a | |
| libtool: install: chmod 644 /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libcmph.a | |
| libtool: install: ranlib /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libcmph.a | |
| libtool: finish: PATH="/gulo/glob/kleve/private/linuxbrew/bin:/sw/comp/gcc/4.9.1_milou/bin:/home/kleve/glob/private/linuxbrew/bin:/home/kleve/perl5/bin:/home/kleve/.pyenv/shims:/home/kleve/.pyenv/bin:/usr/local/sbin:/home/kleve/bin:~/python:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/thinlinc/bin:/sw/uppmax/bin:/home/kleve/bin:/home/kleve/Dropbox/bin:/home/kleve/bin/x86_64:/home/kleve/.gem/ruby/2.0.0/bin:/home/kleve/.gem/ruby/1.8/bin:/gulo/glob/kleve/private/linuxbrew/Library/ENV/scm:/sbin" ldconfig -n /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| ---------------------------------------------------------------------- | |
| Libraries have been installed in: | |
| /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| If you ever happen to want to link against installed libraries | |
| in a given directory, LIBDIR, you must either use libtool, and | |
| specify the full pathname of the library, or use the `-LLIBDIR' | |
| flag during linking and do at least one of the following: | |
| - add LIBDIR to the `LD_LIBRARY_PATH' environment variable | |
| during execution | |
| - add LIBDIR to the `LD_RUN_PATH' environment variable | |
| during linking | |
| - use the `-Wl,-rpath -Wl,LIBDIR' linker flag | |
| - have your system administrator add LIBDIR to `/etc/ld.so.conf' | |
| See any operating system documentation about shared libraries for | |
| more information, such as the ld(1) and ld.so(8) manual pages. | |
| ---------------------------------------------------------------------- | |
| test -z "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/bin" || /bin/mkdir -p "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/bin" | |
| /bin/sh ../libtool --mode=install /usr/bin/install -c cmph '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/bin' | |
| libtool: install: /usr/bin/install -c .libs/cmph /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/bin/cmph | |
| test -z "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include" || /bin/mkdir -p "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include" | |
| /usr/bin/install -c -m 644 cmph.h cmph_types.h cmph_time.h chd_ph.h '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include' | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/src' | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/src' | |
| Making install in tests | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/tests' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/tests' | |
| make[5]: Nothing to be done for `install-exec-am'. | |
| make[5]: Nothing to be done for `install-data-am'. | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/tests' | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/tests' | |
| Making install in examples | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/examples' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/examples' | |
| make[5]: Nothing to be done for `install-exec-am'. | |
| make[5]: Nothing to be done for `install-data-am'. | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/examples' | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/examples' | |
| Making install in man | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/man' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/man' | |
| make[5]: Nothing to be done for `install-exec-am'. | |
| test -z "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/share/man/man1" || /bin/mkdir -p "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/share/man/man1" | |
| /usr/bin/install -c -m 644 cmph.1 '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/share/man/man1' | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/man' | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0/man' | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| make[5]: Nothing to be done for `install-exec-am'. | |
| test -z "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/pkgconfig" || /bin/mkdir -p "/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/pkgconfig" | |
| /usr/bin/install -c -m 644 cmph.pc '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/pkgconfig' | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| make[3]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/cmph-2.0 && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/libcmph-install | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 2 | |
| [ 16%] Completed 'libcmph' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles/libcmph-complete | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libcmph-prefix/src/libcmph-stamp/libcmph-done | |
| make[2]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 2 3 4 5 6 7 8 9 | |
| [ 16%] Built target libcmph | |
| make -f CMakeFiles/libjellyfish.dir/build.make CMakeFiles/libjellyfish.dir/depend | |
| make[2]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles/libjellyfish.dir/DependInfo.cmake --color= | |
| Scanning dependencies of target libjellyfish | |
| make[2]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| make -f CMakeFiles/libjellyfish.dir/build.make CMakeFiles/libjellyfish.dir/build | |
| make[2]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 12 | |
| [ 18%] Creating directories for 'libjellyfish' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10 | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10 | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/tmp | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/libjellyfish-mkdir | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 13 | |
| [ 20%] Performing download step (download, verify and extract) for 'libjellyfish' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/download-libjellyfish.cmake | |
| -- downloading... | |
| src='http://www.cbcb.umd.edu/software/jellyfish/jellyfish-1.1.10.tar.gz' | |
| dst='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10.tar.gz' | |
| timeout='none' | |
| -- [download 0% complete] | |
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| -- downloading... done | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/verify-libjellyfish.cmake | |
| -- verifying file... | |
| file='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10.tar.gz' | |
| -- verifying file... warning: did not verify file - no URL_HASH specified? | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/extract-libjellyfish.cmake | |
| -- extracting... | |
| src='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10.tar.gz' | |
| dst='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| -- extracting... [tar xfz] | |
| -- extracting... [analysis] | |
| -- extracting... [rename] | |
| -- extracting... [clean up] | |
| -- extracting... done | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/libjellyfish-download | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 15 | |
| [ 22%] No patch step for 'libjellyfish' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/libjellyfish-patch | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 14 | |
| [ 24%] No update step for 'libjellyfish' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/libjellyfish-update | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 16 | |
| [ 26%] Performing configure step for 'libjellyfish' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10 && /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10/configure --prefix=/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install | |
| checking build system type... x86_64-unknown-linux-gnu | |
| checking host system type... x86_64-unknown-linux-gnu | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking whether build environment is sane... yes | |
| checking for a thread-safe mkdir -p... /bin/mkdir -p | |
| checking for gawk... gawk | |
| checking whether make sets $(MAKE)... yes | |
| checking whether make supports nested variables... yes | |
| checking how to print strings... printf | |
| checking for style of include used by make... GNU | |
| checking for gcc... /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 accepts -g... yes | |
| checking for /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 option to accept ISO C89... none needed | |
| checking dependency style of /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9... gcc3 | |
| checking for a sed that does not truncate output... /bin/sed | |
| checking for grep that handles long lines and -e... /bin/grep | |
| checking for egrep... /bin/grep -E | |
| checking for fgrep... /bin/grep -F | |
| checking for ld used by /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking whether ln -s works... yes | |
| checking the maximum length of command line arguments... 3458764513820540925 | |
| checking whether the shell understands some XSI constructs... yes | |
| checking whether the shell understands "+="... yes | |
| checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for ar... ar | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking command to parse /usr/bin/nm -B output from /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 object... ok | |
| checking for sysroot... no | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking how to run the C preprocessor... /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 supports -fno-rtti -fno-exceptions... yes | |
| checking for /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 option to produce PIC... -fPIC -DPIC | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 PIC flag -fPIC -DPIC works... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 static flag -static works... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 supports -c -o file.o... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 supports -c -o file.o... (cached) yes | |
| checking whether the /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... yes | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 accepts -g... yes | |
| checking dependency style of /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9... gcc3 | |
| checking how to run the C++ preprocessor... /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 -E | |
| checking for ld used by /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 option to produce PIC... -fPIC -DPIC | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 PIC flag -fPIC -DPIC works... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 static flag -static works... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 supports -c -o file.o... yes | |
| checking if /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 supports -c -o file.o... (cached) yes | |
| checking whether the /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for md5sum... md5sum | |
| checking for __int128... yes | |
| checking whether strerror_r is declared... yes | |
| checking for strerror_r... yes | |
| checking whether strerror_r returns char *... no | |
| checking execinfo.h usability... yes | |
| checking execinfo.h presence... yes | |
| checking for execinfo.h... yes | |
| checking for siginfo_t.si_int... yes | |
| configure: creating ./config.status | |
| config.status: creating Makefile | |
| config.status: creating tests/compat.sh | |
| config.status: creating jellyfish-1.1.pc | |
| config.status: creating config.h | |
| config.status: executing depfiles commands | |
| config.status: executing libtool commands | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10 && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/libjellyfish-configure | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 17 | |
| [ 28%] Performing build step for 'libjellyfish' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10 && make | |
| make[3]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| make all-am | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| CXX jellyfish/square_binary_matrix.lo | |
| CXX jellyfish/err.lo | |
| CXX jellyfish/misc.lo | |
| CXX jellyfish/storage.lo | |
| CXX jellyfish/thread_exec.lo | |
| CXX jellyfish/time.lo | |
| CXX jellyfish/file_parser.lo | |
| CXX jellyfish/read_parser.lo | |
| CXX jellyfish/parse_read.lo | |
| CXX jellyfish/half.lo | |
| CXX jellyfish/mapped_file.lo | |
| CXX jellyfish/parse_dna.lo | |
| CXX jellyfish/parse_quake.lo | |
| CXX jellyfish/parse_qual_dna.lo | |
| CXX jellyfish/sequence_parser.lo | |
| CXX jellyfish/seq_qual_parser.lo | |
| CXX jellyfish/backtrace.lo | |
| CXX jellyfish/floats.lo | |
| CXX jellyfish/dbg.lo | |
| CXX jellyfish/allocators_mmap.lo | |
| CXX jellyfish/dna_codes.lo | |
| CXXLD libjellyfish-1.1.la | |
| CXX jellyfish/jellyfish.o | |
| CXX jellyfish/stats_main.o | |
| CXX jellyfish/hash_merge.o | |
| CXX jellyfish/mer_counter.o | |
| CXX jellyfish/histo_main.o | |
| CXX jellyfish/dump_main.o | |
| CXX jellyfish/query_main.o | |
| CXX jellyfish/dump_fastq_main.o | |
| CXX jellyfish/histo_fastq_main.o | |
| CXX jellyfish/cite.o | |
| CXX jellyfish/hash_fastq_merge.o | |
| CXX jellyfish/yaggo.o | |
| CXXLD bin/jellyfish | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| make[3]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10 && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/libjellyfish-build | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 11 | |
| [ 30%] Performing install step for 'libjellyfish' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10 && make install && cp config.h /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include/jellyfish-1.1.10/ && cp jellyfish/noop_dumper.hpp /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include/jellyfish-1.1.10/jellyfish && cp jellyfish/count_main_cmdline.hpp /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include/jellyfish-1.1.10/jellyfish | |
| make[3]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| /bin/mkdir -p '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib' | |
| /bin/sh ./libtool --mode=install /usr/bin/install -c libjellyfish-1.1.la '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib' | |
| libtool: install: /usr/bin/install -c .libs/libjellyfish-1.1.so.1.0.1 /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libjellyfish-1.1.so.1.0.1 | |
| libtool: install: (cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib && { ln -s -f libjellyfish-1.1.so.1.0.1 libjellyfish-1.1.so.1 || { rm -f libjellyfish-1.1.so.1 && ln -s libjellyfish-1.1.so.1.0.1 libjellyfish-1.1.so.1; }; }) | |
| libtool: install: (cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib && { ln -s -f libjellyfish-1.1.so.1.0.1 libjellyfish-1.1.so || { rm -f libjellyfish-1.1.so && ln -s libjellyfish-1.1.so.1.0.1 libjellyfish-1.1.so; }; }) | |
| libtool: install: /usr/bin/install -c .libs/libjellyfish-1.1.lai /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libjellyfish-1.1.la | |
| libtool: install: /usr/bin/install -c .libs/libjellyfish-1.1.a /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libjellyfish-1.1.a | |
| libtool: install: chmod 644 /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libjellyfish-1.1.a | |
| libtool: install: ranlib /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/libjellyfish-1.1.a | |
| libtool: finish: PATH="/gulo/glob/kleve/private/linuxbrew/bin:/sw/comp/gcc/4.9.1_milou/bin:/home/kleve/glob/private/linuxbrew/bin:/home/kleve/perl5/bin:/home/kleve/.pyenv/shims:/home/kleve/.pyenv/bin:/usr/local/sbin:/home/kleve/bin:~/python:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/thinlinc/bin:/sw/uppmax/bin:/home/kleve/bin:/home/kleve/Dropbox/bin:/home/kleve/bin/x86_64:/home/kleve/.gem/ruby/2.0.0/bin:/home/kleve/.gem/ruby/1.8/bin:/gulo/glob/kleve/private/linuxbrew/Library/ENV/scm:/sbin" ldconfig -n /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| ---------------------------------------------------------------------- | |
| Libraries have been installed in: | |
| /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib | |
| If you ever happen to want to link against installed libraries | |
| in a given directory, LIBDIR, you must either use libtool, and | |
| specify the full pathname of the library, or use the `-LLIBDIR' | |
| flag during linking and do at least one of the following: | |
| - add LIBDIR to the `LD_LIBRARY_PATH' environment variable | |
| during execution | |
| - add LIBDIR to the `LD_RUN_PATH' environment variable | |
| during linking | |
| - use the `-Wl,-rpath -Wl,LIBDIR' linker flag | |
| - have your system administrator add LIBDIR to `/etc/ld.so.conf' | |
| See any operating system documentation about shared libraries for | |
| more information, such as the ld(1) and ld.so(8) manual pages. | |
| ---------------------------------------------------------------------- | |
| /bin/mkdir -p '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/bin' | |
| /bin/sh ./libtool --mode=install /usr/bin/install -c bin/jellyfish '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/bin' | |
| libtool: install: /usr/bin/install -c bin/.libs/jellyfish /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/bin/jellyfish | |
| /bin/mkdir -p '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include/jellyfish-1.1.10/jellyfish' | |
| /usr/bin/install -c -m 644 jellyfish/allocators_malloc.hpp jellyfish/allocators_mmap.hpp jellyfish/allocators_shm.hpp jellyfish/atomic_gcc.hpp jellyfish/compacted_dumper.hpp jellyfish/compacted_hash.hpp jellyfish/concurrent_queues.hpp jellyfish/direct_indexing_array.hpp jellyfish/direct_sorted_dumper.hpp jellyfish/divisor.hpp jellyfish/dumper.hpp jellyfish/hash_function.hpp jellyfish/hash.hpp jellyfish/heap.hpp jellyfish/invertible_hash_array.hpp jellyfish/locking_hash_counters.hpp jellyfish/locks_pthread.hpp jellyfish/mapped_file.hpp jellyfish/mer_counting.hpp jellyfish/err.hpp jellyfish/misc.hpp jellyfish/offsets_key_value.hpp jellyfish/reversible_hash_function.hpp jellyfish/sorted_dumper.hpp jellyfish/square_binary_matrix.hpp jellyfish/storage.hpp jellyfish/thread_exec.hpp jellyfish/time.hpp jellyfish/token_ring.hpp jellyfish/raw_dumper.hpp jellyfish/capped_integer.hpp jellyfish/aligned_values_array.hpp jellyfish/fastq_dumper.hpp jellyfish/floats.hpp jellyfish/circular_buffer.hpp jellyfish/counter.hpp jellyfish/parse_quake.hpp jellyfish/parse_dna.hpp jellyfish/parse_qual_dna.hpp jellyfish/file_parser.hpp '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include/jellyfish-1.1.10/jellyfish' | |
| /usr/bin/install -c -m 644 jellyfish/sequence_parser.hpp jellyfish/seq_qual_parser.hpp jellyfish/double_fifo_input.hpp jellyfish/read_parser.hpp jellyfish/parse_read.hpp jellyfish/simple_growing_array.hpp jellyfish/toFloat.h jellyfish/eLut.h jellyfish/dbg.hpp jellyfish/half.h jellyfish/backtrace.hpp jellyfish/dna_codes.hpp jellyfish/simple_circular_buffer.hpp '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/include/jellyfish-1.1.10/jellyfish' | |
| /bin/mkdir -p '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/share/man/man1' | |
| /usr/bin/install -c -m 644 'doc/jellyfish.man' '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/share/man/man1/jellyfish.1' | |
| /bin/mkdir -p '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/pkgconfig' | |
| /usr/bin/install -c -m 644 jellyfish-1.1.pc '/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install/lib/pkgconfig' | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| make[3]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/jellyfish-1.1.10 && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/libjellyfish-install | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 10 | |
| [ 32%] Completed 'libjellyfish' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles/libjellyfish-complete | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libjellyfish-prefix/src/libjellyfish-stamp/libjellyfish-done | |
| make[2]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 10 11 12 13 14 15 16 17 | |
| [ 32%] Built target libjellyfish | |
| make -f CMakeFiles/libshark.dir/build.make CMakeFiles/libshark.dir/depend | |
| make[2]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles/libshark.dir/DependInfo.cmake --color= | |
| Scanning dependencies of target libshark | |
| make[2]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| make -f CMakeFiles/libshark.dir/build.make CMakeFiles/libshark.dir/build | |
| make[2]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 20 | |
| [ 34%] Creating directories for 'libshark' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/tmp | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E make_directory /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp/libshark-mkdir | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 21 | |
| [ 36%] Performing download step (download, verify and extract) for 'libshark' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp/download-libshark.cmake | |
| -- downloading... | |
| src='http://www.cs.cmu.edu/~robp/files/Shark.tar.gz' | |
| dst='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark.tar.gz' | |
| timeout='none' | |
| -- [download 0% complete] | |
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| -- downloading... done | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp/verify-libshark.cmake | |
| -- verifying file... | |
| file='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark.tar.gz' | |
| -- verifying file... warning: did not verify file - no URL_HASH specified? | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -P /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp/extract-libshark.cmake | |
| -- extracting... | |
| src='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark.tar.gz' | |
| dst='/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| -- extracting... [tar xfz] | |
| -- extracting... [analysis] | |
| -- extracting... [rename] | |
| -- extracting... [clean up] | |
| -- extracting... done | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp/libshark-download | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 23 | |
| [ 38%] No patch step for 'libshark' | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp/libshark-patch | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 22 | |
| [ 40%] No update step for 'libshark' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp/libshark-update | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 24 | |
| [ 42%] Performing configure step for 'libshark' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -DOPT_DYNAMIC_LIBRARY=FALSE -DBoost_NO_SYSTEM_PATHS=TRUE -DBOOST_INCLUDEDIR=/gulo/glob/kleve/private/linuxbrew/include -DBOOST_LIBRARYDIR=/gulo/glob/kleve/private/linuxbrew/lib -DOPT_MAKE_TESTS=OFF -DCMAKE_INSTALL_PREFIX=/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/install "-GUnix Makefiles" /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark | |
| -- The CXX compiler identification is GNU 4.9.1 | |
| -- Check for working CXX compiler: /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 | |
| -- Check for working CXX compiler: /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 -- works | |
| -- Detecting CXX compiler ABI info | |
| -- Detecting CXX compiler ABI info - done | |
| -- The C compiler identification is GNU 4.9.1 | |
| -- Check for working C compiler: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 | |
| -- Check for working C compiler: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 -- works | |
| -- Detecting C compiler ABI info | |
| -- Detecting C compiler ABI info - done | |
| -- C++ compiler: /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 | |
| -- C compiler: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 | |
| -- Boost version: 1.56.0 | |
| -- Found the following Boost libraries: | |
| -- system | |
| -- date_time | |
| -- filesystem | |
| -- program_options | |
| -- regex | |
| -- signals | |
| -- serialization | |
| -- thread | |
| -- unit_test_framework | |
| -- /gulo/glob/kleve/private/linuxbrew/lib | |
| -- Configuring done | |
| -- Generating done | |
| -- Build files have been written to: /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark && /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E touch /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/libshark-prefix/src/libshark-stamp/libshark-configure | |
| /gulo/glob/kleve/private/linuxbrew/Cellar/cmake/3.0.2/bin/cmake -E cmake_progress_report /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build/CMakeFiles 25 | |
| [ 44%] Performing build step for 'libshark' | |
| cd /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark && sh -c make | |
| make[3]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| make[4]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| Scanning dependencies of target Version | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| [ 2%] Building CXX object src/CMakeFiles/Version.dir/Core/Version.cpp.o | |
| Linking CXX executable bin/Version | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| [ 2%] Built target Version | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| Scanning dependencies of target shark | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| make[5]: Entering directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| [ 5%] Building CXX object src/CMakeFiles/shark.dir/Models/LinearNorm.cpp.o | |
| [ 8%] Building CXX object src/CMakeFiles/shark.dir/Models/Converter.cpp.o | |
| [ 11%] Building CXX object src/CMakeFiles/shark.dir/Models/RBFNet.cpp.o | |
| [ 14%] Building CXX object src/CMakeFiles/shark.dir/Models/Softmax.cpp.o | |
| [ 17%] Building CXX object src/CMakeFiles/shark.dir/Models/KalmanFilter.cpp.o | |
| [ 20%] Building CXX object src/CMakeFiles/shark.dir/Models/CMAC.cpp.o | |
| [ 23%] Building CXX object src/CMakeFiles/shark.dir/Models/OnlineRNNet.cpp.o | |
| [ 26%] Building CXX object src/CMakeFiles/shark.dir/Models/RNNet.cpp.o | |
| [ 29%] Building CXX object src/CMakeFiles/shark.dir/Models/SigmoidModel.cpp.o | |
| [ 32%] Building CXX object src/CMakeFiles/shark.dir/Models/LinearClassifier.cpp.o | |
| In file included from /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark/include/shark/Data/Impl/Dataset.inl:39:0, | |
| from /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark/include/shark/Data/Dataset.h:47, | |
| from /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark/include/shark/Models/AbstractModel.h:35, | |
| from /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark/include/shark/Models/LinearClassifier.h:4, | |
| from /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark/src/Models/LinearClassifier.cpp:37: | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/serialization/shared_ptr.hpp: In instantiation of ‘void boost::serialization::load(Archive&, boost::shared_ptr<U>&, unsigned int) [with Archive = boost::archive::polymorphic_iarchive; T = shark::blas::matrix<double, shark::blas::basic_row_major<> >]’: | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/serialization/split_free.hpp:58:22: required from ‘static void boost::serialization::free_loader<Archive, T>::invoke(Archive&, T&, unsigned int) [with Archive = boost::archive::polymorphic_iarchive; T = boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > >]’ | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/serialization/split_free.hpp:74:38: required from ‘void boost::serialization::split_free(Archive&, T&, unsigned int) [with Archive = boost::archive::polymorphic_iarchive; T = boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > >]’ | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/serialization/shared_ptr.hpp:180:57: required from ‘void boost::serialization::serialize(Archive&, boost::shared_ptr<U>&, unsigned int) [with Archive = boost::archive::polymorphic_iarchive; T = shark::blas::matrix<double, shark::blas::basic_row_major<> >]’ | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/serialization/serialization.hpp:128:27: required from ‘void boost::serialization::serialize_adl(Archive&, T&, unsigned int) [with Archive = boost::archive::polymorphic_iarchive; T = boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > >]’ | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/archive/detail/iserializer.hpp:188:5: required from ‘void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::polymorphic_iarchive; T = boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > >]’ | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/archive/detail/iserializer.hpp:116:1: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/archive/detail/iserializer.hpp:618:24: required from ‘void boost::archive::load(Archive&, T&) [with Archive = boost::archive::polymorphic_iarchive; T = std::vector<boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > >, std::allocator<boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > > > >]’ | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/archive/polymorphic_iarchive.hpp:107:40: required from ‘void boost::archive::polymorphic_iarchive_impl::load_override(T&, int) [with T = std::vector<boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > >, std::allocator<boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > > > >]’ | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/archive/detail/interface_iarchive.hpp:60:9: required from ‘Archive& boost::archive::detail::interface_iarchive<Archive>::operator>>(T&) [with T = std::vector<boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > >, std::allocator<boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > > > >; Archive = boost::archive::polymorphic_iarchive]’ | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/archive/detail/interface_iarchive.hpp:67:32: required from ‘Archive& boost::archive::detail::interface_iarchive<Archive>::operator&(T&) [with T = std::vector<boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > >, std::allocator<boost::shared_ptr<shark::blas::matrix<double, shark::blas::basic_row_major<> > > > >; Archive = boost::archive::polymorphic_iarchive]’ | |
| /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark/include/shark/Data/Impl/Dataset.inl:418:11: required from ‘void shark::detail::SharedContainer<Type>::read(shark::InArchive&) [with Type = shark::blas::vector<double>; shark::InArchive = boost::archive::polymorphic_iarchive]’ | |
| /tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark/src/Models/LinearClassifier.cpp:183:1: required from here | |
| /gulo/glob/kleve/private/linuxbrew/include/boost/serialization/shared_ptr.hpp:163:11: error: ‘class boost::archive::polymorphic_iarchive’ has no member named ‘get_helper’ | |
| >(); | |
| ^ | |
| make[5]: *** [src/CMakeFiles/shark.dir/Models/LinearClassifier.cpp.o] Error 1 | |
| make[5]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| make[4]: *** [src/CMakeFiles/shark.dir/all] Error 2 | |
| make[4]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| make[3]: *** [all] Error 2 | |
| make[3]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/external/Shark' | |
| make[2]: *** [libshark-prefix/src/libshark-stamp/libshark-build] Error 2 | |
| make[2]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| make[1]: *** [CMakeFiles/libshark.dir/all] Error 2 | |
| make[1]: Leaving directory `/tmp/sailfish-ksUEoY/Sailfish-0.6.2-Source/build' | |
| make: *** [all] Error 2 | |
| ==> Formula | |
| Tap: homebrew/homebrew-science | |
| Path: /gulo/glob/kleve/private/linuxbrew/Library/Taps/homebrew/homebrew-science/sailfish.rb | |
| ==> Configuration | |
| HOMEBREW_VERSION: 0.9.5 | |
| HEAD: f5d4584434f46433b009629149fe9792676ed051 | |
| HOMEBREW_PREFIX: /gulo/glob/kleve/private/linuxbrew | |
| CPU: 16-core 64-bit 6 | |
| OS X: 0-x86_64 | |
| X11: N/A | |
| ==> ENV | |
| CC: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 => /pica/sw/comp/gcc/4.9.1_milou/bin/gcc | |
| CXX: /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 => /pica/sw/comp/gcc/4.9.1_milou/bin/g++ | |
| OBJC: /gulo/glob/kleve/private/linuxbrew/bin/gcc-4.9 | |
| OBJCXX: /gulo/glob/kleve/private/linuxbrew/bin/g++-4.9 | |
| HOMEBREW_CC: gcc-4.9 | |
| CFLAGS: -Os -w -pipe -march=core2 | |
| CXXFLAGS: -Os -w -pipe -march=core2 | |
| CPPFLAGS: -isystem/gulo/glob/kleve/private/linuxbrew/include | |
| LDFLAGS: -L/gulo/glob/kleve/private/linuxbrew/lib -Wl,-rpath,/gulo/glob/kleve/private/linuxbrew/lib | |
| CMAKE_PREFIX_PATH: /gulo/glob/kleve/private/linuxbrew | |
| PKG_CONFIG_LIBDIR: /gulo/glob/kleve/private/linuxbrew/lib/pkgconfig | |
| ACLOCAL_PATH: /gulo/glob/kleve/private/linuxbrew/share/aclocal | |
| PATH: /gulo/glob/kleve/private/linuxbrew/bin:/sw/comp/gcc/4.9.1_milou/bin:/home/kleve/glob/private/linuxbrew/bin:/home/kleve/perl5/bin:/home/kleve/.pyenv/shims:/home/kleve/.pyenv/bin:/usr/local/sbin:/home/kleve/bin:~/python:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/thinlinc/bin:/sw/uppmax/bin:/home/kleve/bin:/home/kleve/Dropbox/bin:/home/kleve/bin/x86_64:/home/kleve/.gem/ruby/2.0.0/bin:/home/kleve/.gem/ruby/1.8/bin:/gulo/glob/kleve/private/linuxbrew/Library/ENV/scm | |
| Error: sailfish 0.6.2 did not build | |
| Logs: | |
| /home/kleve/Library/Logs/Homebrew/sailfish/02.make | |
| /home/kleve/Library/Logs/Homebrew/sailfish/01.cmake |
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