-

From 5f60239292d8d963997aeb14201e2e9eb2635c63 Mon Sep 17 00:00:00 2001
From: Daniel Klevebring <daniel.klevebring@gmail.com>
Date: Wed, 24 Sep 2014 06:42:15 +0000
Subject: [PATCH] added quotes around  to build on centos 6.5

---
 Analysis/CMakeLists.txt                      |    2 +-
 buildTools/cmake/CMakeLists.compiler.txt     |    4 ++--
 buildTools/cmake/CMakeLists.dependencies.txt |   26 +++++++++++++-------------
 buildTools/cmake/CMakeLists.version.txt      |    6 +++---
 4 files changed, 19 insertions(+), 19 deletions(-)

diff --git a/Analysis/CMakeLists.txt b/Analysis/CMakeLists.txt
index aee8f3d..c20a88a 100644
--- a/Analysis/CMakeLists.txt
+++ b/Analysis/CMakeLists.txt
@@ -317,7 +317,7 @@ if(ION_USE_CUDA)
   endif()
 endif()
 
-if (${LSB_RELEASE_CODENAME} STREQUAL "lucid")
+if ("${LSB_RELEASE_CODENAME}" STREQUAL "lucid")
     set(LUCID_EXTRA_LIB lapack_atlas)
 endif()
 
diff --git a/buildTools/cmake/CMakeLists.compiler.txt b/buildTools/cmake/CMakeLists.compiler.txt
index 02c472e..6d6ebc9 100644
--- a/buildTools/cmake/CMakeLists.compiler.txt
+++ b/buildTools/cmake/CMakeLists.compiler.txt
@@ -6,7 +6,7 @@ IF(NOT CMAKE_CONFIGURATION_TYPES AND NOT CMAKE_BUILD_TYPE)
 ENDIF()
 
 # Common compiler flags
-if (${LSB_RELEASE_CODENAME} STREQUAL "lucid" OR ${LSB_RELEASE_CODENAME} STREQUAL "raring")
+if ("${LSB_RELEASE_CODENAME}" STREQUAL "lucid" OR "${LSB_RELEASE_CODENAME}" STREQUAL "raring")
     set(ION_COMMON_FLAGS "${ION_COMMON_FLAGS} -Wall -Wextra -Werror -fPIC")
 else()
     set(ION_COMMON_FLAGS "${ION_COMMON_FLAGS} -Wall -Wextra -fPIC")
@@ -20,7 +20,7 @@ execute_process(COMMAND ${CMAKE_CXX_COMPILER} -dumpversion OUTPUT_VARIABLE GCC_C
 # GCC depresses SSEx instructions when -mavx is used. Instead, it generates new AVX instructions or AVX equivalence for all SSEx instructions when needed.
 if ("${CMAKE_C_COMPILER_ID}" STREQUAL "GNU")
     if(GCC_C_VERSION VERSION_EQUAL 4.4 OR (GCC_C_VERSION VERSION_GREATER 4.4) AND NOT CMAKE_SSE_ONLY)
-        if (${LSB_RELEASE_CODENAME} STREQUAL "lucid")
+        if ("${LSB_RELEASE_CODENAME}" STREQUAL "lucid")
             set(ION_COMMON_FLAGS "${ION_COMMON_FLAGS} -msse3")
         else()
             set(ION_COMMON_FLAGS "${ION_COMMON_FLAGS} -mavx")
diff --git a/buildTools/cmake/CMakeLists.dependencies.txt b/buildTools/cmake/CMakeLists.dependencies.txt
index d0ed5da..3baf30c 100644
--- a/buildTools/cmake/CMakeLists.dependencies.txt
+++ b/buildTools/cmake/CMakeLists.dependencies.txt
@@ -26,7 +26,7 @@ mark_as_advanced(ION_USE_MKL)
 option(ION_USE_SYSTEM_CUDA "Use CUDA system libraries" OFF)
 mark_as_advanced(ION_USE_SYSTEM_CUDA)
 
-if (${LSB_RELEASE_CODENAME} STREQUAL "sid")
+if ("${LSB_RELEASE_CODENAME}" STREQUAL "sid")
   option(ION_USE_CUDA "Compile CUDA code" ON)
 else()
   option(ION_USE_CUDA "Compile CUDA code" ON)
@@ -39,24 +39,24 @@ mark_as_advanced(ION_USE_SYSTEM_SAMTOOLS)
 option(ION_USE_SYSTEM_BAMTOOLS "Use bamtools system libraries" OFF)
 mark_as_advanced(ION_USE_SYSTEM_BAMTOOLS)
 
-if (${LSB_RELEASE_CODENAME} STREQUAL "sid" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "jessie" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "wheezy" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "trusty" OR 
-    ${LSB_RELEASE_CODENAME} STREQUAL "saucy" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "raring")
+if ("${LSB_RELEASE_CODENAME}" STREQUAL "sid" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "jessie" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "wheezy" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "trusty" OR 
+    "${LSB_RELEASE_CODENAME}" STREQUAL "saucy" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "raring")
   option(ION_USE_SYSTEM_FFTW "Use fftw system libraries" ON)
 else()
   option(ION_USE_SYSTEM_FFTW "Use fftw system libraries" OFF)
 endif()
 mark_as_advanced(ION_USE_SYSTEM_FFTW)
 
-if (${LSB_RELEASE_CODENAME} STREQUAL "sid" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "jessie" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "wheezy" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "trusty" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "saucy" OR
-    ${LSB_RELEASE_CODENAME} STREQUAL "raring")
+if ("${LSB_RELEASE_CODENAME}" STREQUAL "sid" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "jessie" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "wheezy" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "trusty" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "saucy" OR
+    "${LSB_RELEASE_CODENAME}" STREQUAL "raring")
   option(ION_USE_SYSTEM_HDF5 "Use hdf5 system libraries" ON)
 else()
   option(ION_USE_SYSTEM_HDF5 "Use hdf5 system libraries" OFF)
diff --git a/buildTools/cmake/CMakeLists.version.txt b/buildTools/cmake/CMakeLists.version.txt
index 84b8fa9..c809314 100644
--- a/buildTools/cmake/CMakeLists.version.txt
+++ b/buildTools/cmake/CMakeLists.version.txt
@@ -42,17 +42,17 @@ if(LSB_RELEASE_COMMAND)
     message(STATUS "LSB release codename: ${LSB_RELEASE_CODENAME}")
 endif(LSB_RELEASE_COMMAND) 
 
-if (${LSB_RELEASE_CODENAME} STREQUAL "lucid")
+if ("${LSB_RELEASE_CODENAME}" STREQUAL "lucid")
     set(cuda_proj_version "5.5.22-16488124")
     set(cuda_toolkit_tar_file "cuda-linux64-rel-5.5.22-16488124.tar.gz")
     set(cuda_devdriver_file "devdriver_NVIDIA-Linux-x86_64-331.20-no-compat32.run")
     set(CUDA_VERSION "5.5")
-elseif (${LSB_RELEASE_CODENAME} STREQUAL "oneiric")
+elseif ("${LSB_RELEASE_CODENAME}" STREQUAL "oneiric")
     set(cuda_proj_version "5.5.22-16488124")
     set(cuda_toolkit_tar_file "cuda-linux64-rel-5.5.22-16488124.tar.gz")
     set(cuda_devdriver_file "devdriver_NVIDIA-Linux-x86_64-331.20-no-compat32.run")
     set(CUDA_VERSION "5.5")
-elseif (${LSB_RELEASE_CODENAME} STREQUAL "trusty")
+elseif ("${LSB_RELEASE_CODENAME}" STREQUAL "trusty")
     set(cuda_proj_version "5.5.22-16488124")
     set(cuda_toolkit_tar_file "cuda-linux64-rel-5.5.22-16488124.tar.gz")
     set(cuda_devdriver_file "devdriver_NVIDIA-Linux-x86_64-334.21-no-compat32.run")
-- 
1.7.1