Created
May 4, 2016 06:34
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| 11540659 + 0 in total (QC-passed reads + QC-failed reads) | |
| 6365 + 0 secondary | |
| 0 + 0 supplementary | |
| 0 + 0 duplicates | |
| 11540643 + 0 mapped (100.00%:-nan%) | |
| 11534294 + 0 paired in sequencing | |
| 5767147 + 0 read1 | |
| 5767147 + 0 read2 | |
| 11518384 + 0 properly paired (99.86%:-nan%) | |
| 11534266 + 0 with itself and mate mapped | |
| 12 + 0 singletons (0.00%:-nan%) | |
| 628 + 0 with mate mapped to a different chr | |
| 344 + 0 with mate mapped to a different chr (mapQ>=5) |
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| 1 249250621 860208 1 | |
| 2 243199373 1106007 2 | |
| 3 198022430 545145 1 | |
| 4 191154276 359862 0 | |
| 5 180915260 604803 0 | |
| 6 171115067 531674 0 | |
| 7 159138663 667701 2 | |
| 8 146364022 398788 0 | |
| 9 141213431 371684 0 | |
| 10 135534747 411317 0 | |
| 11 135006516 397326 1 | |
| 12 133851895 451235 0 | |
| 13 115169878 241506 1 | |
| 14 107349540 196401 1 | |
| 15 102531392 305768 0 | |
| 16 90354753 414172 0 | |
| 17 81195210 728986 1 | |
| 18 78077248 212281 1 | |
| 19 59128983 406564 1 | |
| 20 63025520 167774 0 | |
| 21 48129895 91318 0 | |
| 22 51304566 118749 0 | |
| X 155270560 189549 0 | |
| Y 59373566 55 0 | |
| MT 16569 1760887 0 | |
| GL000207.1 4262 0 0 | |
| GL000226.1 15008 0 0 | |
| GL000229.1 19913 0 0 | |
| GL000231.1 27386 0 0 | |
| GL000210.1 27682 0 0 | |
| GL000239.1 33824 0 0 | |
| GL000235.1 34474 0 0 | |
| GL000201.1 36148 0 0 | |
| GL000247.1 36422 0 0 | |
| GL000245.1 36651 0 0 | |
| GL000197.1 37175 0 0 | |
| GL000203.1 37498 0 0 | |
| GL000246.1 38154 0 0 | |
| GL000249.1 38502 0 0 | |
| GL000196.1 38914 1 0 | |
| GL000248.1 39786 0 0 | |
| GL000244.1 39929 0 0 | |
| GL000238.1 39939 0 0 | |
| GL000202.1 40103 0 0 | |
| GL000234.1 40531 0 0 | |
| GL000232.1 40652 0 0 | |
| GL000206.1 41001 0 0 | |
| GL000240.1 41933 0 0 | |
| GL000236.1 41934 2 0 | |
| GL000241.1 42152 3 0 | |
| GL000243.1 43341 0 0 | |
| GL000242.1 43523 1 0 | |
| GL000230.1 43691 0 0 | |
| GL000237.1 45867 0 0 | |
| GL000233.1 45941 0 0 | |
| GL000204.1 81310 0 0 | |
| GL000198.1 90085 0 0 | |
| GL000208.1 92689 0 0 | |
| GL000191.1 106433 0 0 | |
| GL000227.1 128374 0 0 | |
| GL000228.1 129120 0 0 | |
| GL000214.1 137718 0 0 | |
| GL000221.1 155397 0 0 | |
| GL000209.1 159169 0 0 | |
| GL000218.1 161147 0 0 | |
| GL000220.1 161802 2 0 | |
| GL000213.1 164239 0 0 | |
| GL000211.1 166566 4 0 | |
| GL000199.1 169874 0 0 | |
| GL000217.1 172149 0 0 | |
| GL000216.1 172294 0 0 | |
| GL000215.1 172545 0 0 | |
| GL000205.1 174588 2 0 | |
| GL000219.1 179198 2 0 | |
| GL000224.1 179693 0 0 | |
| GL000223.1 180455 0 0 | |
| GL000195.1 182896 0 0 | |
| GL000212.1 186858 40 0 | |
| GL000222.1 186861 0 0 | |
| GL000200.1 187035 0 0 | |
| GL000193.1 189789 0 0 | |
| GL000194.1 191469 0 0 | |
| GL000225.1 211173 0 0 | |
| GL000192.1 547496 0 0 | |
| NC_007605 171823 9 0 | |
| hs37d5 35477943 817 0 | |
| * 0 0 4 |
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