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@dalguji
Last active August 29, 2015 13:59
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Plotting Maps: Visualizing Haiti Earthquake Crisis Data
import pandas as pd
import numpy as np
from pandas import DataFrame
data = pd.read_csv('Haiti.csv')
data = data[(data.LATITUDE > 18) & (data.LATITUDE < 20) &
(data.LONGITUDE > -75) & (data.LONGITUDE < -70)
& data.CATEGORY.notnull()]
def to_cat_list(catstr):
stripped = (x.strip() for x in catstr.split(','))
return [x for x in stripped if x]
def get_all_categories(cat_series):
cat_sets = (set(to_cat_list(x)) for x in cat_series)
return sorted(set.union(*cat_sets))
def get_english(cat):
code, names = cat.split('.')
if '|' in names:
names = names.split(' | ')[1]
return code, names.strip()
all_cats = get_all_categories(data.CATEGORY)
english_mapping = dict(get_english(x) for x in all_cats)
def get_code(seq):
return [x.split('.')[0] for x in seq if x]
all_codes = get_code(all_cats)
code_index = pd.Index(np.unique(all_codes))
dummy_frame = DataFrame(np.zeros((len(data), len(code_index))),
index=data.index, columns=code_index)
for row, cat in zip(data.index, data.CATEGORY):
codes = get_code(to_cat_list(cat))
dummy_frame.ix[row, codes] = 1
data = data.join(dummy_frame.add_prefix('category_'))
from mpl_toolkits.basemap import Basemap
import matplotlib.pyplot as plt
def basic_haiti_map(ax=None, lllat=17.25, urlat=20.25, lllon=-75, urlon=-71):
# create polar stereographic Basemap instance.
m = Basemap(ax=ax, projection='stere',
lon_0=(urlon + lllon) / 2,
lat_0=(urlat + lllat) / 2,
llcrnrlat=lllat, urcrnrlat=urlat,
llcrnrlon=lllon, urcrnrlon=urlon,
resolution='f')
# draw coastlines, state and country boundaries, edge of map.
m.drawcoastlines()
m.drawstates()
m.drawcountries()
return m
fig, axes = plt.subplots(nrows=2, ncols=2, figsize=(12, 10))
fig.subplots_adjust(hspace=0.05, wspace=0.05)
to_plot = ['2a', '1', '3c', '7a']
lllat=17.25; urlat=20.25; lllon=-75; urlon=-71
for code, ax in zip(to_plot, axes.flat):
m = basic_haiti_map(ax, lllat=lllat, urlat=urlat,
lllon=lllon, urlon=urlon)
cat_data = data[data['category_%s' % code] == 1]
# compute map proj coordinates.
x, y = m(cat_data.LONGITUDE.values, cat_data.LATITUDE.values)
m.plot(x, y, 'k.', alpha=0.5)
ax.set_title('%s: %s' % (code, english_mapping[code]))
plt.show()
@dalguji
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dalguji commented Apr 17, 2014

This is an example code for "Plotting Maps: Visualizing Haiti Earthquake Crisis Data" on a book, Python for Data Analysis. Page 242-246

Haiti.csv file can be downloaded from https://github.com/pydata/pydata-book/raw/master/ch08/Haiti.csv

@dalguji
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dalguji commented Jun 18, 2014

The resulting figure can be seen at http://i.imgur.com/n4Zojxg.png

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