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#git clone
## adding .RProj file
##

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Updating a feature branch

First we'll update your local master branch. Go to your local project and check out the branch you want to merge into (your local master branch)

$ git checkout master

Fetch the remote, bringing the branches and their commits from the remote repository. You can use the -p, --prune option to delete any remote-tracking references that no longer exist in the remote. Commits to master will be stored in a local branch, remotes/origin/master

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3D Regression Shiny App

Base R code created by Irvin Alcaraz
Shiny app files created by Irvin Alcaraz

Cal Poly Statistics Dept Shiny Series 
http://statistics.calpoly.edu/shiny

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Hey there, apparently people are still using this Gist from 2013! It's out of date! Consult the Github docs.

Steps for Hosting a Website on GitHub

1. Create a GitHub account on github.com.
2. Download either [GitHub for Mac][1] or [GitHub for Windows][2], depending on your operating system. Open the app and log in using the account you just created.
3. (On Mac): After you login, click advanced and make sure that your name and email are correct. Then, click "Install Command Line Tools", just in case you want to start using the command line later in life.
4. Create a new repository in your GitHub application. Name it your-username.github.io. The name is very important. Note the folder that GitHub is saving the repository to. Make sure the "Push to GitHub?" box is checked.
5. Move your website's files into the folder that GitHub just created when you made the repository. IMPORTANT: Your homepage HTML file must be called "index.html", and it must exist in the top-level

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# Make sure you have the project running through RStudio with a "project" file within the root directory.
#libraries
library(here)
library(tidyverse)

# 1. Place R scripts in folder within the root directory (project file location)

# 2. Source file from this location in RMD file

source("./R/Rscriptv1.R")

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There are packages for this now!

2017-08-03: Since I wrote this in 2014, the universe, specifically Kirill Müller (https://github.com/krlmlr), has provided better solutions to this problem. I now recommend that you use one of these two packages:

• rprojroot: This is the main package with functions to help you express paths in a way that will "just work" when developing interactively in an RStudio Project and when you render your file.
• here: A lightweight wrapper around rprojroot that anticipates the most likely scenario: you want to write paths relative to the top-level directory, defined as an RStudio project or Git repo. TRY THIS FIRST.

I love these packages so much I wrote an ode to here.

I use these packages now instead of what I describe below. I'll leave this gist up for historical interest. 😆

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bookdown::gitbook:
  css: style.css
  config:
    toc:
      before: |
        <li><a href="./">Book title.</a></li>
      after: |
        <li><a href="https://github.com/username/repo" target="blank">Published with bookdown</a></li>
    edit: https://github.com/username/repo/docs/edit/master/%s
    download: ["pdf", "epub", "mobi", "docx"]

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---
title: "Book title"
site: bookdown::bookdown_site
output: bookdown::gitbook
#github-repo: username/repo
subtitle: "Sub info"
# bibliography: ["references.bib", "book.bib"]
---

# Summary {#summary}

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t-test Shiny App

Base R code created by Jimmy Wong
Shiny app files created by Jimmy Wong

Cal Poly Statistics Dept Shiny Series 
http://statistics.calpoly.edu/shiny

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