another andante compilation error

gistfile1.sh

dhcp-172-17-187-12:Andante david$ make
gcc   -I.  -I../../lm  -I../liborc   -c -o alloc_structures.o alloc_structures.c
gcc   -I.  -I../../lm  -I../liborc   -c -o andante.o andante.c
gcc   -I.  -I../../lm  -I../liborc   -c -o assign_radii.o assign_radii.c
gcc   -I.  -I../../lm  -I../liborc   -c -o borrow_chi.o borrow_chi.c
gcc   -I.  -I../../lm  -I../liborc   -c -o borrowed_clashes.o borrowed_clashes.c
gcc   -I.  -I../../lm  -I../liborc   -c -o build_stuff.o build_stuff.c
gcc   -I.  -I../../lm  -I../liborc   -c -o check_rotamers.o check_rotamers.c
gcc   -I.  -I../../lm  -I../liborc   -c -o clash_check.o clash_check.c
gcc   -I.  -I../../lm  -I../liborc   -c -o combo_utility.o combo_utility.c
gcc   -I.  -I../../lm  -I../liborc   -c -o create_rotamer_library.o create_rotamer_library.c
gcc   -I.  -I../../lm  -I../liborc   -c -o d5_util1.o d5_util1.c
gcc   -I.  -I../../lm  -I../liborc   -c -o d5_util2.o d5_util2.c
gcc   -I.  -I../../lm  -I../liborc   -c -o dee_functions.o dee_functions.c
gcc   -I.  -I../../lm  -I../liborc   -c -o dee_functions2.o dee_functions2.c
gcc   -I.  -I../../lm  -I../liborc   -c -o dee_sa_combo.o dee_sa_combo.c
gcc   -I.  -I../../lm  -I../liborc   -c -o dee_utilty.o dee_utilty.c
gcc   -I.  -I../../lm  -I../liborc   -c -o disul4.o disul4.c
gcc   -I.  -I../../lm  -I../liborc   -c -o disul5.o disul5.c
gcc   -I.  -I../../lm  -I../liborc   -c -o disul5_data.o disul5_data.c
gcc   -I.  -I../../lm  -I../liborc   -c -o dyn_clash_array.o dyn_clash_array.c
gcc   -I.  -I../../lm  -I../liborc   -c -o hbond_acceptor.o hbond_acceptor.c
gcc   -I.  -I../../lm  -I../liborc   -c -o init_options.o init_options.c
gcc   -I.  -I../../lm  -I../liborc   -c -o input.o input.c
gcc   -I.  -I../../lm  -I../liborc   -c -o keep_connect.o keep_connect.c
gcc   -I.  -I../../lm  -I../liborc   -c -o load_bb_lib.o load_bb_lib.c
gcc   -I.  -I../../lm  -I../liborc   -c -o morph.o morph.c
gcc   -I.  -I../../lm  -I../liborc   -c -o morph_utility.o morph_utility.c
gcc   -I.  -I../../lm  -I../liborc   -c -o no_borrow.o no_borrow.c
gcc   -I.  -I../../lm  -I../liborc   -c -o penult_lib_choose.o penult_lib_choose.c
gcc   -I.  -I../../lm  -I../liborc   -c -o pid_choose.o pid_choose.c
gcc   -I.  -I../../lm  -I../liborc   -c -o preprocess_H3.o preprocess_H3.c
gcc   -I.  -I../../lm  -I../liborc   -c -o ran2.o ran2.c
gcc   -I.  -I../../lm  -I../liborc   -c -o read_ali.o read_ali.c
gcc   -I.  -I../../lm  -I../liborc   -c -o read_tem_file.o read_tem_file.c
gcc   -I.  -I../../lm  -I../liborc   -c -o reset_clear.o reset_clear.c
gcc   -I.  -I../../lm  -I../liborc   -c -o restrict12.o restrict12.c
gcc   -I.  -I../../lm  -I../liborc   -c -o restrict_rotamers.o restrict_rotamers.c
gcc   -I.  -I../../lm  -I../liborc   -c -o sa_combos.o sa_combos.c
gcc   -I.  -I../../lm  -I../liborc   -c -o user_opts_help.o user_opts_help.c
gcc   -I.  -I../../lm  -I../liborc   -c -o utility.o utility.c
gcc   -I.  -I../../lm  -I../liborc   -c -o utility2.o utility2.c
gcc   -I.  -I../../lm  -I../liborc   -c -o utility3.o utility3.c
gcc   -I.  -I../../lm  -I../liborc   -c -o utility4.o utility4.c
gcc   -I.  -I../../lm  -I../liborc -o Andante  alloc_structures.o  andante.o  assign_radii.o  borrow_chi.o  borrowed_clashes.o  build_stuff.o  check_rotamers.o  clash_check.o  combo_utility.o  create_rotamer_library.o  d5_util1.o  d5_util2.o  dee_functions.o  dee_functions2.o  dee_sa_combo.o  dee_utilty.o  disul4.o  disul5.o  disul5_data.o  dyn_clash_array.o  hbond_acceptor.o  init_options.o  input.o  keep_connect.o  load_bb_lib.o  morph.o  morph_utility.o  no_borrow.o  penult_lib_choose.o  pid_choose.o  preprocess_H3.o  ran2.o  read_ali.o  read_tem_file.o  reset_clear.o  restrict12.o  restrict_rotamers.o  sa_combos.o  user_opts_help.o  utility.o  utility2.o  utility3.o  utility4.o -lm  ../liborc/liborc.a
ld: warning: ignoring file ../liborc/liborc.a, file was built for archive which is not the architecture being linked (x86_64): ../liborc/liborc.a
Undefined symbols for architecture x86_64:
  "_AssignAtom", referenced from:
      _mutant_lib_rotamers in build_stuff.o
      _check_atom_allocation in input.o
      _load_parent_coordinates in input.o
      _morph_atom_allocation in morph_utility.o
      _Alloc_Heavy_Atoms in utility4.o
  "_Build_missing_CB", referenced from:
      _borrow_chi1 in borrow_chi.o
      _create_rotamer_library in create_rotamer_library.o
      _morph in morph.o
      _no_borrow in no_borrow.o
  "_CB_defined", referenced from:
      _build_rot in build_stuff.o
      _CB_d_OK in d5_util1.o
      _quick_check in d5_util1.o
      _clear_initial_coords in reset_clear.o
      _reset_sidechain_coords in reset_clear.o
      _first_check_for_user_conserved_keep in utility3.o
  "_Calc_Dihedral", referenced from:
      _approx_CC_bonds4 in disul4.o
  "_Calc_Distance", referenced from:
      _check_conserved_conserved_clash in borrowed_clashes.o
      _CA_d_OK in d5_util1.o
      _CB_d_OK in d5_util1.o
      _quick_check in d5_util1.o
      _CC_rot_bb_E in disul4.o
      _score_vdw_clashes in disul5.o
      _place_morph_TER in morph_utility.o
      ...
  "_CreateFRAGMENT", referenced from:
      _morph in morph.o
  "_CreateRESIDUE", referenced from:
      _alloc_morph_coord_memory in morph_utility.o
  "_FreeFRAGMENT", referenced from:
      _borrow_chi1 in borrow_chi.o
      _morph in morph.o
      _no_borrow in no_borrow.o
      _preprocess_H3_data in preprocess_H3.o
  "_ORC_MODAA_HANDLING", referenced from:
      _main in andante.o
  "_OutputPDB", referenced from:
      _borrow_chi1 in borrow_chi.o
      _build_mutant_residue_rotamers in build_stuff.o
      _check_rotamers in check_rotamers.o
      _create_rotamer_library in create_rotamer_library.o
      _morph in morph.o
      _no_borrow in no_borrow.o
  "_RES_CheckAtomOrder", referenced from:
      _check_atom_allocation in input.o
  "_ReadPDB", referenced from:
      _borrow_chi1 in borrow_chi.o
      _check_rotamers in check_rotamers.o
      _create_rotamer_library in create_rotamer_library.o
      _load_parent_coordinates in input.o
      _no_borrow in no_borrow.o
      _preprocess_H3_data in preprocess_H3.o
  "_ResIndex", referenced from:
      _assign_rotamer_atom_radii in assign_radii.o
      _check_atom_allocation in input.o
      _load_parent_coordinates in input.o
      _morph_atom_allocation in morph_utility.o
      _Alloc_Heavy_Atoms in utility4.o
  "_SeqIndex", referenced from:
      _check_conserved_conserved_clash in borrowed_clashes.o
      _mutant_lib_rotamers in build_stuff.o
      _residual_clash_check in clash_check.o
      _singleE in clash_check.o
      _rot_bb_E in clash_check.o
      _sc_sc_clash in clash_check.o
      _DEE_singleE in dee_utilty.o
      ...
  "_SeqRes", referenced from:
      _mutant_lib_rotamers in build_stuff.o
      _alloc_morph_coord_memory in morph_utility.o
  "_UpdateDerivedPDB", referenced from:
      _borrow_chi1 in borrow_chi.o
      _check_rotamers in check_rotamers.o
      _create_rotamer_library in create_rotamer_library.o
      _split_clusters in dee_utilty.o
      _update_parent_data in input.o
      _no_borrow in no_borrow.o
  "_assign_SYBYL_Radii", referenced from:
      _borrow_chi1 in borrow_chi.o
      _check_rotamers in check_rotamers.o
      _create_rotamer_library in create_rotamer_library.o
      _no_borrow in no_borrow.o
  "_calc_disulphide_variables", referenced from:
      _new_disulphide in disul5.o
  "_energy", referenced from:
      _CC_rot_bb_E in disul4.o
      _score_vdw_clashes in disul5.o
     (maybe you meant: _and_energy)
  "_is_backbone_atom", referenced from:
      _check_1_borr_bb_clash in borrowed_clashes.o
      _reset_sidechain_coords in reset_clear.o
  "_is_defined_atom", referenced from:
      _CC_rot_bb_E in disul4.o
      _score_vdw_clashes in disul5.o
  "_is_sidechain_atom", referenced from:
      _check_conserved_conserved_clash in borrowed_clashes.o
  "_load_pdb", referenced from:
      _borrow_chi1 in borrow_chi.o
      _create_rotamer_library in create_rotamer_library.o
  "_missing_bb_atom_check", referenced from:
      _borrow_chi1 in borrow_chi.o
      _create_rotamer_library in create_rotamer_library.o
      _no_borrow in no_borrow.o
  "_positive_chi_value", referenced from:
      _new_chi2_penalty in d5_util1.o
  "_read_SYBYL_atom_info", referenced from:
      _main in andante.o
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make: *** [Andante] Error 1