This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
dhcp-172-17-187-12:Andante david$ make | |
gcc -I. -I../../lm -I../liborc -c -o alloc_structures.o alloc_structures.c | |
gcc -I. -I../../lm -I../liborc -c -o andante.o andante.c | |
gcc -I. -I../../lm -I../liborc -c -o assign_radii.o assign_radii.c | |
gcc -I. -I../../lm -I../liborc -c -o borrow_chi.o borrow_chi.c | |
gcc -I. -I../../lm -I../liborc -c -o build_stuff.o build_stuff.c | |
gcc -I. -I../../lm -I../liborc -c -o check_rotamers.o check_rotamers.c | |
gcc -I. -I../../lm -I../liborc -c -o combo_utility.o combo_utility.c | |
gcc -I. -I../../lm -I../liborc -c -o create_rotamer_library.o create_rotamer_library.c | |
gcc -I. -I../../lm -I../liborc -c -o d5_util1.o d5_util1.c |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
dhcp-172-17-187-12:Andante david$ make | |
gcc -I. -I../../lm -I../liborc -c -o alloc_structures.o alloc_structures.c | |
gcc -I. -I../../lm -I../liborc -c -o andante.o andante.c | |
gcc -I. -I../../lm -I../liborc -c -o assign_radii.o assign_radii.c | |
gcc -I. -I../../lm -I../liborc -c -o borrow_chi.o borrow_chi.c | |
gcc -I. -I../../lm -I../liborc -c -o borrowed_clashes.o borrowed_clashes.c | |
gcc -I. -I../../lm -I../liborc -c -o build_stuff.o build_stuff.c | |
gcc -I. -I../../lm -I../liborc -c -o check_rotamers.o check_rotamers.c | |
gcc -I. -I../../lm -I../liborc -c -o clash_check.o clash_check.c | |
gcc -I. -I../../lm -I../liborc -c -o combo_utility.o combo_utility.c |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
1 warning generated. | |
mv -f .deps/tinyxmlparser.Tpo .deps/tinyxmlparser.Plo | |
/bin/sh ../../libtool --tag=CXX --mode=link g++ -DNDEBUG -DUSE_TINYXML -DTIXML_USE_STL -DC99_OK -O2 -fno-common -DHAVE_ZLIB -framework Accelerate -static -o libtinyxml.la -rpath /Users/david/amber12/lib tinyxml.lo tinyxmlerror.lo tinystr.lo tinyxmlparser.lo -lz | |
libtool: link: ar cru .libs/libtinyxml.a tinyxml.o tinyxmlerror.o tinystr.o tinyxmlparser.o | |
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: .libs/libtinyxml.a(tinystr.o) has no symbols | |
libtool: link: ranlib .libs/libtinyxml.a | |
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: .libs/libtinyxml.a(tinystr.o) has no symbols | |
libtool: link: ( cd ".libs" && rm -f "libtinyxml.la" && ln -s "../libtinyxml.la" "libtinyxml.la" ) | |
Making all in Log | |
/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I./.. -I/Users/david/amber12/AmberTools/src/boost-1.38. |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"metadata": { | |
"collapsed": true | |
}, | |
"outputs": [], | |
"source": [ |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
#!/bin/bash | |
min=60 | |
say "Testing" | |
sleep 1 | |
say "Testing" | |
sleep 1 | |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
-I: Adding /Users/david/bin/amber14/dat/leap/prep to search path. | |
-I: Adding /Users/david/bin/amber14/dat/leap/lib to search path. | |
-I: Adding /Users/david/bin/amber14/dat/leap/parm to search path. | |
-I: Adding /Users/david/bin/amber14/dat/leap/cmd to search path. | |
-s: Ignoring startup file: leaprc | |
-f: Source tleapIn. | |
Welcome to LEaP! | |
Sourcing: ./tleapIn | |
----- Source: /Users/david/bin/amber14/dat/leap/cmd/leaprc.ff12SB |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
/usr/local/bin/speedtest-cli --csv > ~/.speedtest.log.csv |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
#!/bin/bash -e | |
cd /tmp | |
wget "https://sourceforge.net/projects/pymol/files/pymol/2/pymol-v2.1.0.tar.bz2" | |
tar -xf pymol-v2.1.0.tar.bz2 | |
cd pymol | |
mkdir -p ~/bin/pymol/modules | |
python2.7 setup.py build install \ | |
--install-scripts=~/bin/pymol \ |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
david ~> vf new -p python3 pystart-env | |
Running virtualenv with interpreter /usr/local/bin/python3 | |
Using base prefix '/usr/local/Cellar/python/3.6.5/Frameworks/Python.framework/Versions/3.6' | |
New python executable in /Users/david/.virtualenvs/pystart-env/bin/python3.6 | |
Also creating executable in /Users/david/.virtualenvs/pystart-env/bin/python | |
Installing setuptools, pip, wheel...done. | |
(pystart-env) david ~> pip install pystart | |
Collecting pystart | |
Collecting validate-email>=1.3 (from pystart) | |
Requirement already satisfied: pip>=9.0.1 in ./.virtualenvs/pystart-env/lib/python3.6/site-packages (from pystart) (10.0.1) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
@font-face { | |
font-family: "Roboto Mono"; | |
font-weight: normal; | |
font-style: normal; | |
src: local('"Roboto Mono"'), url('fonts/roboto.ttf') format('truetype'); | |
} | |
div.CodeMirror { | |
font-family: "Roboto Mono", monospace, monospace; | |
} |
OlderNewer