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dbolser-ebi/gist:c88215566573f942475f

Created May 21, 2014 15:08
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Painful GFF
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gistfile1.txt
##gff-version 3
##sequence-region 1812.scaffold02418 1 1541
1812.scaffold02418 AUGUSTUS gene 1 1541 0.29 - . ID=Bv_56410_edoq;Name=Bv_56410_edoq
1812.scaffold02418 AUGUSTUS mRNA 1 1541 0.29 - . ID=Bv_56410_edoq.t1;Parent=Bv_56410_edoq;Name=Bv_56410_edoq.t1 88.9%;Note=cDNAcoverage_88.9%
1812.scaffold02418 AUGUSTUS intron 1 218 0.39 - . ID=Bv_56410_edoq.t1.intron;Parent=Bv_56410_edoq.t1
1812.scaffold02418 AUGUSTUS CDS 219 293 0.67 - 0 ID=Bv_56410_edoq.t1.CDS;Parent=Bv_56410_edoq.t1
1812.scaffold02418 AUGUSTUS intron 294 610 0.83 - . ID=Bv_56410_edoq.t1.intron;Parent=Bv_56410_edoq.t1
1812.scaffold02418 AUGUSTUS CDS 611 655 0.83 - 0 ID=Bv_56410_edoq.t1.CDS;Parent=Bv_56410_edoq.t1
1812.scaffold02418 AUGUSTUS start_codon 653 655 . - 0 ID=Bv_56410_edoq.t1.start_codon;Parent=Bv_56410_edoq.t1
1812.scaffold02418 AUGUSTUS five_prime_UTR 656 708 . - . Parent=Bv_56410_edoq.t1
1812.scaffold02418 AUGUSTUS five_prime_UTR 844 949 . - . Parent=Bv_56410_edoq.t1
1812.scaffold02418 AUGUSTUS five_prime_UTR 1324 1541 . - . Parent=Bv_56410_edoq.t1
###
##sequence-region contig129422 1 481
contig129422 AUGUSTUS gene 1 481 0.28 - . ID=Bv_74460_uozm;Name=Bv_74460_uozm
contig129422 AUGUSTUS mRNA 1 481 0.28 - . ID=Bv_74460_uozm.t1;Parent=Bv_74460_uozm;Name=Bv_74460_uozm.t1 33.3%;Note=cDNAcoverage_33.3%
contig129422 AUGUSTUS three_prime_UTR 1 171 . - . Parent=Bv_74460_uozm.t1
contig129422 AUGUSTUS stop_codon 172 174 . - 0 ID=Bv_74460_uozm.t1.stop_codon;Parent=Bv_74460_uozm.t1
contig129422 AUGUSTUS CDS 172 408 0.68 - 0 ID=Bv_74460_uozm.t1.CDS;Parent=Bv_74460_uozm.t1
contig129422 AUGUSTUS start_codon 406 408 . - 0 ID=Bv_74460_uozm.t1.start_codon;Parent=Bv_74460_uozm.t1
contig129422 AUGUSTUS five_prime_UTR 409 481 . - . Parent=Bv_74460_uozm.t1
###
##sequence-region contig128400 1 692
contig128400 AUGUSTUS gene 1 692 0.33 + . ID=Bv_74000_ihwa;Name=Bv_74000_ihwa
contig128400 AUGUSTUS mRNA 1 692 0.33 + . ID=Bv_74000_ihwa.t1;Parent=Bv_74000_ihwa;Name=Bv_74000_ihwa.t1 33.3%;Note=cDNAcoverage_33.3%
contig128400 AUGUSTUS intron 1 244 0.87 + . ID=Bv_74000_ihwa.t1.intron;Parent=Bv_74000_ihwa.t1
contig128400 AUGUSTUS CDS 245 574 0.96 + 0 ID=Bv_74000_ihwa.t1.CDS;Parent=Bv_74000_ihwa.t1
contig128400 AUGUSTUS stop_codon 572 574 . + 0 ID=Bv_74000_ihwa.t1.stop_codon;Parent=Bv_74000_ihwa.t1
contig128400 AUGUSTUS three_prime_UTR 575 692 . + . Parent=Bv_74000_ihwa.t1
###
##sequence-region contig128401 1 691
contig128401 AUGUSTUS gene 1 691 0.95 + . ID=Bv_74010_dzqo;Name=Bv_74010_dzqo
contig128401 AUGUSTUS mRNA 1 691 0.95 + . ID=Bv_74010_dzqo.t1;Parent=Bv_74010_dzqo;Name=Bv_74010_dzqo.t1 100%;Note=cDNAcoverage_100%
contig128401 AUGUSTUS CDS 1 691 0.95 + 2 ID=Bv_74010_dzqo.t1.CDS;Parent=Bv_74010_dzqo.t1
###
@standage
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