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dbolser/dummy data.txt

Last active August 17, 2018 11:54
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Some dummy alignment data to chain.
Raw
dummy data.txt
+---------------+------------------+----------------+-------------------+-------------------+----------------+-----------+---------+------------+------------+------------+-------+------------------+
| seq_region_id | seq_region_start | seq_region_end | seq_region_length | seq_region_strand | hit_name | hit_start | hit_end | hit_length | hit_strand | perc_ident | score | evalue |
+---------------+------------------+----------------+-------------------+-------------------+----------------+-----------+---------+------------+------------+------------+-------+------------------+
| 82 | 9191436 | 9192063 | 628 | -1 | XR_001930025.1 | 353 | 958 | 606 | 1 | 79 | 221 | 5e-112 |
| 82 | 8315905 | 8316314 | 410 | -1 | XR_001930025.1 | 596 | 1008 | 413 | 1 | 84 | 210 | 4e-106 |
| 127 | 37710340 | 37710847 | 508 | -1 | XR_001930025.1 | 498 | 1008 | 511 | 1 | 82 | 230 | 3e-116 |
| 127 | 15935200 | 15935308 | 109 | -1 | XR_001930025.1 | 353 | 461 | 109 | 1 | 93 | 85 | 2e-36 |
| 127 | 15934695 | 15935091 | 397 | -1 | XR_001930025.1 | 464 | 872 | 409 | 1 | 84 | 202 | 1e-101 |
| 127 | 9280227 | 9280320 | 94 | -1 | XR_001930025.1 | 258 | 358 | 101 | 1 | 91 | 70 | 4e-29 |*
| 127 | 9279697 | 9280204 | 508 | -1 | XR_001930025.1 | 462 | 969 | 508 | 1 | 98 | 475 | 0 |* I'm picking this pair so far
| 127 | 31062796 | 31063326 | 531 | 1 | XR_001930025.1 | 462 | 1008 | 547 | 1 | 85 | 287 | 2e-149 |
| 2997 | 10491832 | 10492177 | 346 | -1 | XR_001930025.1 | 352 | 698 | 347 | 1 | 90 | 241 | 3e-124 |
| 2997 | 3323373 | 3323865 | 493 | -1 | XR_001930025.1 | 462 | 966 | 505 | 1 | 85 | 274 | 1e-142 |
| 5812 | 6638734 | 6638842 | 109 | 1 | XR_001930025.1 | 353 | 461 | 109 | 1 | 93 | 85 | 1e-34 |
| 5812 | 6638949 | 6639490 | 542 | 1 | XR_001930025.1 | 462 | 1008 | 547 | 1 | 85 | 301 | 1e-154 |
| 6233 | 10260938 | 10261097 | 160 | -1 | XR_001930025.1 | 462 | 621 | 160 | 1 | 78 | 55 | 2e-17 |
| 6233 | 8830153 | 8830662 | 510 | -1 | XR_001930025.1 | 462 | 966 | 505 | -1 | 81 | 213 | 3e-105 |
| 6233 | 8829938 | 8830046 | 109 | -1 | XR_001930025.1 | 353 | 461 | 109 | -1 | 82 | 49 | 0.00000000000004 |
| 6233 | 8753759 | 8754289 | 531 | -1 | XR_001930025.1 | 462 | 1008 | 547 | -1 | 82 | 236 | 4e-118 |
| 6233 | 8753543 | 8753651 | 109 | -1 | XR_001930025.1 | 353 | 461 | 109 | -1 | 94 | 88 | 8e-36 |
| 6233 | 8828390 | 8828500 | 111 | 1 | XR_001930025.1 | 353 | 463 | 111 | 1 | 82 | 51 | 2e-17 |
| 6233 | 8828526 | 8829035 | 510 | 1 | XR_001930025.1 | 462 | 966 | 505 | 1 | 81 | 213 | 1e-107 |
| 8991 | 30968987 | 30969095 | 109 | -1 | XR_001930025.1 | 353 | 461 | 109 | 1 | 90 | 76 | 2e-30 |
| 8991 | 30968335 | 30968880 | 546 | -1 | XR_001930025.1 | 462 | 1007 | 546 | 1 | 86 | 315 | 3e-163 |
| 8991 | 6526146 | 6526689 | 544 | 1 | XR_001930025.1 | 462 | 1008 | 547 | 1 | 85 | 296 | 1e-154 |
| 11827 | 36551338 | 36551880 | 543 | -1 | XR_001930025.1 | 462 | 1005 | 544 | 1 | 86 | 318 | 5e-166 |
| 11827 | 15917871 | 15918351 | 481 | 1 | XR_001930025.1 | 529 | 1008 | 480 | 1 | 87 | 297 | 1e-154 |
| 11827 | 35350100 | 35350615 | 516 | 1 | XR_001930025.1 | 478 | 1005 | 528 | -1 | 80 | 210 | 2e-105 |
| 11827 | 35354096 | 35354203 | 108 | 1 | XR_001930025.1 | 354 | 461 | 108 | -1 | 84 | 57 | 2e-20 |
| 11827 | 35367365 | 35367473 | 109 | 1 | XR_001930025.1 | 353 | 461 | 109 | 1 | 88 | 70 | 1e-27 |
| 11827 | 35367587 | 35368078 | 492 | 1 | XR_001930025.1 | 462 | 958 | 497 | 1 | 80 | 194 | 1e-96 |
| 14711 | 912235 | 912714 | 480 | 1 | XR_001930025.1 | 462 | 958 | 497 | -1 | 79 | 176 | 8e-85 |
| 14711 | 912828 | 912935 | 108 | 1 | XR_001930025.1 | 354 | 461 | 108 | -1 | 85 | 60 | 3e-20 |
| 14711 | 1502327 | 1502839 | 513 | 1 | XR_001930025.1 | 493 | 1005 | 513 | 1 | 79 | 186 | 2e-90 |
| 14711 | 2274686 | 2275212 | 527 | 1 | XR_001930025.1 | 465 | 1008 | 544 | -1 | 84 | 271 | 1e-137 |
| 14711 | 2275323 | 2275430 | 108 | 1 | XR_001930025.1 | 354 | 461 | 108 | -1 | 93 | 84 | 1e-33 |
| 14711 | 15721636 | 15722258 | 623 | 1 | XR_001930025.1 | 356 | 1008 | 653 | 1 | 81 | 260 | 9e-134 |
| 18329 | 13594471 | 13595014 | 544 | 1 | XR_001930025.1 | 462 | 1005 | 544 | -1 | 88 | 343 | 7e-178 |
| 18329 | 13595121 | 13595234 | 114 | 1 | XR_001930025.1 | 349 | 461 | 113 | -1 | 90 | 80 | 1e-31 |
| 20212 | 14004033 | 14004624 | 592 | -1 | XR_001930025.1 | 417 | 1008 | 592 | 1 | 89 | 388 | 0 |
| 20212 | 20762152 | 20762265 | 114 | 1 | XR_001930025.1 | 349 | 461 | 113 | 1 | 93 | 89 | 5e-39 |
| 20212 | 20762373 | 20762915 | 543 | 1 | XR_001930025.1 | 462 | 1007 | 546 | 1 | 84 | 277 | 1e-143 |
| 20212 | 32913159 | 32913237 | 79 | 1 | XR_001930025.1 | 116 | 193 | 78 | 1 | 82 | 36 | 0.00000001 |
| 20212 | 32918125 | 32918615 | 491 | 1 | XR_001930025.1 | 458 | 950 | 493 | 1 | 91 | 360 | 0 |
| 20212 | 32918125 | 32918403 | 279 | 1 | XR_001930025.1 | 458 | 737 | 280 | 1 | 91 | 201 | 5e-102 |
| 20212 | 32918613 | 32918645 | 33 | 1 | XR_001930025.1 | 971 | 1003 | 33 | 1 | 94 | 27 | 0.001 |
+---------------+------------------+----------------+-------------------+-------------------+----------------+-----------+---------+------------+------------+------------+-------+------------------+
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