Created
January 5, 2015 23:01
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logging unicode error
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2015-01-05 16:01:13,885 INFO getting patient data for patient set 64969 | |
Traceback (most recent call last): | |
File "/usr/local/heron_extract/cdr2edc/dfbuilder.py", line 1033, in <module> | |
_trusted_main() | |
File "/usr/local/heron_extract/cdr2edc/dfbuilder.py", line 1031, in _trusted_main | |
gethostname=socket.gethostname) | |
File "/usr/local/heron_extract/cdr2edc/dfbuilder.py", line 951, in main | |
params['label'], concepts, filename, patient_set) | |
File "/usr/local/heron_extract/cdr2edc/dfbuilder.py", line 801, in __call__ | |
out = dest.export(job) | |
File "/usr/local/heron_extract/cdr2edc/dfbuilder.py", line 670, in export | |
self.export_data(dest_star, job) | |
File "/usr/local/heron_extract/cdr2edc/dfbuilder.py", line 633, in export_data | |
q, data = job.patient_data() | |
File "/usr/local/heron_extract/cdr2edc/dfbuilder.py", line 257, in patient_data | |
account.execute(var_ins, var_bind) | |
File "/usr/local/heron_extract/lib/python2.6/site-packages/sqlalchemy/engine/base.py", line 1752, in execute | |
return connection.execute(statement, *multiparams, **params) | |
File "/usr/local/heron_extract/lib/python2.6/site-packages/sqlalchemy/engine/base.py", line 729, in execute | |
return meth(self, multiparams, params) | |
File "/usr/local/heron_extract/lib/python2.6/site-packages/sqlalchemy/sql/elements.py", line 321, in _execute_on_connection | |
return connection._execute_clauseelement(self, multiparams, params) | |
File "/usr/local/heron_extract/lib/python2.6/site-packages/sqlalchemy/engine/base.py", line 826, in _execute_clauseelement | |
compiled_sql, distilled_params | |
File "/usr/local/heron_extract/lib/python2.6/site-packages/sqlalchemy/engine/base.py", line 958, in _execute_context | |
context) | |
File "/usr/local/heron_extract/lib/python2.6/site-packages/sqlalchemy/engine/base.py", line 1163, in _handle_dbapi_exception | |
util.reraise(*exc_info) | |
File "/usr/local/heron_extract/lib/python2.6/site-packages/sqlalchemy/engine/base.py", line 928, in _execute_context | |
context) | |
File "/usr/local/heron_extract/lib/python2.6/site-packages/sqlalchemy/dialects/oracle/cx_oracle.py", line 941, in do_executemany | |
cursor.executemany(statement, parameters) | |
UnicodeEncodeError: 'ascii' codec can't encode character u'\xbf' in position 77: ordinal not in range(128) |
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