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@dermatologist dermatologist/install.sh forked from cwant/install.sh
Created Feb 10, 2019

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This is a script that takes a fresh Compute Canada Ubuntu 16.04 cloud instance, installs docker, docker-compose, ruby, grabs avalon source, and starts services
#!/bin/bash
BIND_NETWORK='192.168'
RUBY_VERSION='2.4'
BUNDLER_VERSION='1.14'
AVALON_REPO='https://github.com/cwant/avalon'
AVALON_BRANCH='cwant/docker-refactor'
SRC_DIR=$HOME/gitwork
AVALON_DIR=$SRC_DIR/avalon
main() {
setup_hostname || exit
install_packages || exit
install_docker || exit
install_ruby || exit
install_sources || exit
configure_sources || exit
launch_services || exit
}
setup_hostname() {
# sudo complains that hostname isn't set, so we set it
hostname=`hostname`
grep '127.0.1.1.*'$hostname /etc/hosts && return 0
sudo sh -c "echo 127.0.1.1 $hostname >> /etc/hosts" || exit 1
}
install_packages() {
sudo apt-get -y update || exit 1
sudo apt-get -y dist-upgrade || exit 1
sudo apt-get install -y \
tmux \
emacs-nox \
lynx \
htop \
git \
phantomjs \
mediainfo \
libmysqlclient-dev \
apt-transport-https \
ca-certificates \
curl \
software-properties-common \
cmake \
nodejs \
libpq-dev \
python3-pip \
libyazpp-dev \
zlib1g-dev \
libyaml-dev \
libsqlite3-dev \
sqlite3 \
autoconf \
libgmp-dev \
libgdbm-dev \
libncurses5-dev \
automake \
libtool \
bison \
pkg-config \
libffi-dev \
libgmp-dev \
libreadline6-dev \
libssl-dev || exit 1
}
install_docker() {
(sudo apt-key list | grep 0EBFCD87) || \
curl -fsSL https://download.docker.com/linux/ubuntu/gpg | \
sudo apt-key add - || exit 1
(apt-cache policy | grep docker) || \
sudo add-apt-repository \
"deb [arch=amd64] https://download.docker.com/linux/ubuntu \
$(lsb_release -cs) stable" || exit 1
sudo apt-get -y update || exit 1
sudo apt-get -y install docker-ce || exit 1
which docker-compose || pip3 install docker-compose || exit 1
sudo service docker start || exit 1
# Note, probably need to log in and out for the next one to stick
sudo adduser $USER docker || exit 1
}
install_ruby() {
# After this runs, if you want to use ruby/bundler you can either login
# again, or run in the current shell by doing: source $HOME/.rvm/scripts/rvm
cd $HOME
[ -d .rvm ] || gpg --keyserver hkp://keys.gnupg.net --recv-keys 409B6B1796C275462A1703113804BB82D39DC0E3 7D2BAF1CF37B13E2069D6956105BD0E739499BDB
[ -d .rvm ] || \curl -sSL https://get.rvm.io | bash -s stable
source $HOME/.rvm/scripts/rvm
rvm install $RUBY_VERSION
gem install bundler -v $BUNDLER_VERSION
}
install_sources() {
mkdir -p $SRC_DIR
cd $SRC_DIR
[ -d avalon ] || git clone $AVALON_REPO || exit
cd $AVALON_DIR
git checkout $AVALON_BRANCH || exit
}
configure_sources() {
cd $AVALON_DIR
cp config/controlled_vocabulary.yml.example \
config/controlled_vocabulary.yml
}
launch_services() {
cd $AVALON_DIR
bundle install --path=vendor/bundle --with development test postgres aws \
|| exit
# The su to $USER is to ensure that shell has user in docker group
sudo su -c "(cd $AVALON_DIR; pwd; docker-compose up -d)" - $USER || exit
sleep 120
bundle exec rake db:setup || exit
bundle exec rake db:migrate || exit
IP=`ifconfig | grep $BIND_NETWORK | sed 's/^.*addr://' | sed 's/ .*$//'`
bundle exec rails s -b $IP -d
}
main || exit
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