Skip to content

Instantly share code, notes, and snippets.

@dgrapov
Last active August 29, 2015 14:02
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save dgrapov/c079db6f3a31f7fa478f to your computer and use it in GitHub Desktop.
Save dgrapov/c079db6f3a31f7fa478f to your computer and use it in GitHub Desktop.
edge list for making oxylipin networks (partial)
sourceName sourceKEGG sourceCID targetName targetKEGG targetCID indirect
arachidonic_acid C00219 444899 TXB2 C05963 5283137 y
arachidonic_acid C00219 444899 PGE2 C00584 5280360 y
arachidonic_acid C00219 444899 LTB4 C02165 5280492 y
linoleic_acid C01595 5280450 9,10,13-TriHOME C14835 5282965 y
linoleic_acid C01595 5280450 9,12,13-TriHOME C14833 9858729 y
linoleic_acid C01595 5280450 EKODE 5283007 y
arachidonic_acid C00219 444899 11(12)-EpETrE 53480479 n
arachidonic_acid C00219 444899 11-HETE C14780 5283168 n
arachidonic_acid C00219 444899 12-HETE C14777 5283155 n
arachidonic_acid C00219 444899 14(15)-EpETrE C14771 5283205 n
arachidonic_acid C00219 444899 15-HETE C04742 5280724 n
arachidonic_acid C00219 444899 5(6)-EpETrE C14768 5353351 n
arachidonic_acid C00219 444899 5-HETE C04805 5280733 n
arachidonic_acid C00219 444899 8(9)-EpETrE C14769 5353364 n
arachidonic_acid C00219 444899 8-HETE C14776 5283154 n
arachidonic_acid C00219 444899 9-HETE C14779 5283167 n
linoleic_acid C01595 5280450 9-HODE C14767 5312830 n
linoleic_acid C01595 5280450 9(10)-EpOME C14825 6246154 n
linoleic_acid C01595 5280450 13-HODE C14762 6443013 n
linoleic_acid C01595 5280450 12(13)-EpOME C14826 5281128 n
9-HODE C14767 5312830 9-oxo-ODE C14766 9839084 n
9(10)-EpOME C14825 6246154 9,10-DiHOME C14828 9966640 n
5-HETE C04805 5280733 5-oxo-ETE C14732 5283159 n
15-HETE C04742 5280724 15-oxo-ETE C04577 5280701 n
12-HETE C14777 5283155 12-oxo-ETE C14807 5283162 n
12(13)-EpOME C14826 5281128 12,13-DiHOME C14829 10236635 n
11(12)-EpETrE 53480479 11,12-DiHETrE C14774 5283146 n
14(15)-EpETrE C14771 5283205 14,15-DiHETrE C14775 5283147 n
5(6)-EpETrE C14768 5353351 5,6-DiHETrE C14772 5283142 n
8(9)-EpETrE C14769 5353364 8,9-DiHETrE C14773 5283144 n
arachidonic_acid C00219 444899 11-HETE C14780 5283168 n
15(16)-EpODE 16061062 15,16-DiHODE 16061068 n
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment