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dataverse (v4.12) indexing error log
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| [#|2019-04-12T16:59:51.484+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391484;_LevelValue=800;| | |
| indexing dataset 1 of 68 (id=16)|#] | |
| [#|2019-04-12T16:59:51.672+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391672;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:51.672+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391672;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:51.674+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391674;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:51.674+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391674;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:51.674+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391674;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:51.675+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391675;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:51.676+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391676;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:51.676+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391676;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:51.678+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391678;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:51.678+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391678;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:51.679+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391679;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:51.679+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391679;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:51.680+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391680;_LevelValue=800;| | |
| FAILURE indexing dataset 1 of 68 (id=16) Exception info: null|#] | |
| [#|2019-04-12T16:59:51.680+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088391680;_LevelValue=800;| | |
| indexing dataset 2 of 68 (id=17)|#] | |
| [#|2019-04-12T16:59:52.182+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392182;_LevelValue=800;| | |
| indexing dataset 3 of 68 (id=18)|#] | |
| [#|2019-04-12T16:59:52.245+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392245;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.245+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392245;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.246+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392246;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.247+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392247;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.247+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392247;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.247+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392247;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.248+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392248;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.248+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392248;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.248+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392248;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.248+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392248;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.249+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392249;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.249+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392249;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.249+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392249;_LevelValue=800;| | |
| FAILURE indexing dataset 3 of 68 (id=18) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.249+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392249;_LevelValue=800;| | |
| indexing dataset 4 of 68 (id=19)|#] | |
| [#|2019-04-12T16:59:52.348+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392348;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.348+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392348;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.349+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392349;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.349+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392349;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.350+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392350;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.350+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392350;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.351+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392351;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.351+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392351;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.351+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392351;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.351+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392351;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.352+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392352;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.352+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392352;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.352+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392352;_LevelValue=800;| | |
| FAILURE indexing dataset 4 of 68 (id=19) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.352+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392352;_LevelValue=800;| | |
| indexing dataset 5 of 68 (id=20)|#] | |
| [#|2019-04-12T16:59:52.421+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392421;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.421+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392421;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.422+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392422;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.422+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392422;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.422+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392422;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.427+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392427;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.428+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392428;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.428+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392428;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.428+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392428;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.428+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392428;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.429+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392429;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.429+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392429;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.429+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392429;_LevelValue=800;| | |
| FAILURE indexing dataset 5 of 68 (id=20) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.429+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392429;_LevelValue=800;| | |
| indexing dataset 6 of 68 (id=21)|#] | |
| [#|2019-04-12T16:59:52.476+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392476;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.477+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392477;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.477+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392477;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.478+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392478;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.478+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392478;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.479+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392479;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.479+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392479;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.479+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392479;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.479+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392479;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.479+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392479;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.480+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392480;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.480+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392480;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.480+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392480;_LevelValue=800;| | |
| FAILURE indexing dataset 6 of 68 (id=21) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.480+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392480;_LevelValue=800;| | |
| indexing dataset 7 of 68 (id=22)|#] | |
| [#|2019-04-12T16:59:52.534+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392534;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.535+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392535;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.536+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392536;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.536+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392536;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.536+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392536;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.537+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392537;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.537+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392537;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.538+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392538;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.538+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392538;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.538+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392538;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.538+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392538;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.539+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392539;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.539+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392539;_LevelValue=800;| | |
| FAILURE indexing dataset 7 of 68 (id=22) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.539+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392539;_LevelValue=800;| | |
| indexing dataset 8 of 68 (id=23)|#] | |
| [#|2019-04-12T16:59:52.604+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392604;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.605+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392605;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.606+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392606;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.606+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392606;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.606+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392606;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.607+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392607;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.607+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392607;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.611+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392611;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.611+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392611;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.612+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392612;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.612+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392612;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.612+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392612;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.613+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392613;_LevelValue=800;| | |
| FAILURE indexing dataset 8 of 68 (id=23) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.613+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392613;_LevelValue=800;| | |
| indexing dataset 9 of 68 (id=24)|#] | |
| [#|2019-04-12T16:59:52.695+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392695;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.695+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392695;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.697+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392697;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.697+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392697;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.697+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392697;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.698+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392698;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.698+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392698;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.698+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392698;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.699+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392699;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.699+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392699;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.699+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392699;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.699+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392699;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.700+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392700;_LevelValue=800;| | |
| FAILURE indexing dataset 9 of 68 (id=24) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.700+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392700;_LevelValue=800;| | |
| indexing dataset 10 of 68 (id=25)|#] | |
| [#|2019-04-12T16:59:52.775+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392775;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.775+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392775;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.777+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392777;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.777+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392777;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.777+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392777;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.778+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392778;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.778+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392778;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.778+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392778;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.779+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392779;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.779+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392779;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.779+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392779;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.779+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392779;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.780+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392780;_LevelValue=800;| | |
| FAILURE indexing dataset 10 of 68 (id=25) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.780+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392780;_LevelValue=800;| | |
| indexing dataset 11 of 68 (id=26)|#] | |
| [#|2019-04-12T16:59:52.868+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392868;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.870+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392870;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.872+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392872;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.872+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392872;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.872+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392872;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.873+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392873;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.873+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392873;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.874+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392874;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.874+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392874;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.874+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392874;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.874+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392874;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.875+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392875;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.875+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392875;_LevelValue=800;| | |
| FAILURE indexing dataset 11 of 68 (id=26) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.875+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392875;_LevelValue=800;| | |
| indexing dataset 12 of 68 (id=27)|#] | |
| [#|2019-04-12T16:59:52.952+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392952;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.953+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392953;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:52.954+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392954;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.954+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392954;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:52.954+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392954;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:52.955+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392955;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:52.955+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392955;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.955+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392955;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:52.955+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392955;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.955+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392955;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:52.956+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392956;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:52.956+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392956;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:52.956+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392956;_LevelValue=800;| | |
| FAILURE indexing dataset 12 of 68 (id=27) Exception info: null|#] | |
| [#|2019-04-12T16:59:52.956+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088392956;_LevelValue=800;| | |
| indexing dataset 13 of 68 (id=28)|#] | |
| [#|2019-04-12T16:59:53.060+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393060;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.060+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393060;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:53.061+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393061;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.061+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393061;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:53.061+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393061;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:53.062+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393062;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.062+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393062;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.063+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393063;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.063+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393063;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.063+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393063;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.063+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393063;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.063+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393063;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:53.064+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393064;_LevelValue=800;| | |
| FAILURE indexing dataset 13 of 68 (id=28) Exception info: null|#] | |
| [#|2019-04-12T16:59:53.064+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393064;_LevelValue=800;| | |
| indexing dataset 14 of 68 (id=29)|#] | |
| [#|2019-04-12T16:59:53.101+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393101;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.101+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393101;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:478) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:53.102+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393102;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.102+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393102;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:53.102+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393102;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:53.103+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393103;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.103+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393103;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:478) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.104+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393104;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.104+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393104;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.104+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393104;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:478) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.104+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393104;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.105+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393105;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:478) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:53.105+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393105;_LevelValue=800;| | |
| FAILURE indexing dataset 14 of 68 (id=29) Exception info: null|#] | |
| [#|2019-04-12T16:59:53.105+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393105;_LevelValue=800;| | |
| indexing dataset 15 of 68 (id=30)|#] | |
| [#|2019-04-12T16:59:53.162+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393162;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.162+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393162;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:53.164+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393164;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.164+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393164;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:53.164+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393164;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:53.165+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393165;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.165+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393165;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.166+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393166;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.166+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393166;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.166+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393166;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.166+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393166;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.167+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393167;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:53.167+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393167;_LevelValue=800;| | |
| FAILURE indexing dataset 15 of 68 (id=30) Exception info: null|#] | |
| [#|2019-04-12T16:59:53.167+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393167;_LevelValue=800;| | |
| indexing dataset 16 of 68 (id=31)|#] | |
| [#|2019-04-12T16:59:53.289+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393289;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.290+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393290;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 75 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 105 more | |
| |#] | |
| [#|2019-04-12T16:59:53.291+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393291;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.291+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393291;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:53.291+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393291;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:53.292+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393292;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.292+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393292;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.293+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393293;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.293+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393293;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.293+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393293;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.293+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393293;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.293+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393293;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 73 more | |
| |#] | |
| [#|2019-04-12T16:59:53.294+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393294;_LevelValue=800;| | |
| FAILURE indexing dataset 16 of 68 (id=31) Exception info: null|#] | |
| [#|2019-04-12T16:59:53.294+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393294;_LevelValue=800;| | |
| indexing dataset 17 of 68 (id=32)|#] | |
| [#|2019-04-12T16:59:53.332+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393332;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.333+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393333;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:478) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:53.334+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393334;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.334+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393334;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:53.334+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393334;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:53.335+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393335;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.335+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393335;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:478) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.335+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393335;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.335+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393335;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.335+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393335;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:478) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.336+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393336;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.336+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393336;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:478) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:53.336+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393336;_LevelValue=800;| | |
| FAILURE indexing dataset 17 of 68 (id=32) Exception info: null|#] | |
| [#|2019-04-12T16:59:53.336+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393336;_LevelValue=800;| | |
| indexing dataset 18 of 68 (id=33)|#] | |
| [#|2019-04-12T16:59:53.374+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393374;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.374+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393374;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:53.375+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393375;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.375+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393375;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:53.376+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393376;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:53.376+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393376;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:53.377+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393377;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.377+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393377;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:53.377+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393377;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.377+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393377;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:53.378+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393378;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:53.378+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393378;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:53.378+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393378;_LevelValue=800;| | |
| FAILURE indexing dataset 18 of 68 (id=33) Exception info: null|#] | |
| [#|2019-04-12T16:59:53.378+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393378;_LevelValue=800;| | |
| indexing dataset 19 of 68 (id=34)|#] | |
| [#|2019-04-12T16:59:53.858+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088393858;_LevelValue=800;| | |
| indexing dataset 20 of 68 (id=35)|#] | |
| [#|2019-04-12T16:59:54.198+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394198;_LevelValue=800;| | |
| indexing dataset 21 of 68 (id=36)|#] | |
| [#|2019-04-12T16:59:54.239+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394239;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.239+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394239;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:54.240+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394240;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.240+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394240;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:54.240+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394240;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:54.241+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394241;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.241+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394241;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.241+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394241;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.241+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394241;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.241+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394241;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.242+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394242;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.242+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394242;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:54.242+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394242;_LevelValue=800;| | |
| FAILURE indexing dataset 21 of 68 (id=36) Exception info: null|#] | |
| [#|2019-04-12T16:59:54.242+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394242;_LevelValue=800;| | |
| indexing dataset 22 of 68 (id=37)|#] | |
| [#|2019-04-12T16:59:54.296+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394296;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.296+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394296;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:54.297+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394297;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.297+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394297;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:54.297+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394297;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:54.298+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394298;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.298+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394298;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.298+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394298;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.298+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394298;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.298+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394298;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.299+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394299;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.299+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394299;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:54.299+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394299;_LevelValue=800;| | |
| FAILURE indexing dataset 22 of 68 (id=37) Exception info: null|#] | |
| [#|2019-04-12T16:59:54.299+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394299;_LevelValue=800;| | |
| indexing dataset 23 of 68 (id=38)|#] | |
| [#|2019-04-12T16:59:54.353+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394353;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.353+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394353;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:54.355+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394355;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.355+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394355;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:54.355+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394355;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:54.356+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394356;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.356+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394356;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.357+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394357;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.357+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394357;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.357+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394357;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.357+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394357;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.357+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394357;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:54.363+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394363;_LevelValue=800;| | |
| FAILURE indexing dataset 23 of 68 (id=38) Exception info: null|#] | |
| [#|2019-04-12T16:59:54.363+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394363;_LevelValue=800;| | |
| indexing dataset 24 of 68 (id=39)|#] | |
| [#|2019-04-12T16:59:54.410+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394410;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.410+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394410;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:54.411+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394411;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.411+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394411;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:54.411+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394411;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:54.412+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394412;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.412+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394412;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.412+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394412;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.412+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394412;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.412+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394412;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.413+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394413;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.413+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394413;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:54.413+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394413;_LevelValue=800;| | |
| FAILURE indexing dataset 24 of 68 (id=39) Exception info: null|#] | |
| [#|2019-04-12T16:59:54.413+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394413;_LevelValue=800;| | |
| indexing dataset 25 of 68 (id=40)|#] | |
| [#|2019-04-12T16:59:54.467+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394467;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.467+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394467;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:54.468+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394468;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.468+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394468;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:54.468+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394468;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:54.469+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394469;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.469+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394469;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.470+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394470;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.470+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394470;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.470+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394470;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.470+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394470;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.470+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394470;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:54.470+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394470;_LevelValue=800;| | |
| FAILURE indexing dataset 25 of 68 (id=40) Exception info: null|#] | |
| [#|2019-04-12T16:59:54.470+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394470;_LevelValue=800;| | |
| indexing dataset 26 of 68 (id=41)|#] | |
| [#|2019-04-12T16:59:54.519+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394519;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.519+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394519;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:54.520+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394520;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.520+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394520;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:54.520+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394520;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:54.521+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394521;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.521+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394521;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.521+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394521;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.521+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394521;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.521+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394521;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.522+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394522;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.522+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394522;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:534) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:54.522+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394522;_LevelValue=800;| | |
| FAILURE indexing dataset 26 of 68 (id=41) Exception info: null|#] | |
| [#|2019-04-12T16:59:54.522+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394522;_LevelValue=800;| | |
| indexing dataset 27 of 68 (id=42)|#] | |
| [#|2019-04-12T16:59:54.559+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394559;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.559+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394559;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.checkExceptionClientTx(EJBContainerTransactionManager.java:662) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:507) | |
| at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:582) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:547) | |
| at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400) | |
| at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:164) | |
| at sun.reflect.GeneratedMethodAccessor229.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| ... 74 more | |
| Caused by: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details. | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.validateOnCallbackEvent(BeanValidationListener.java:90) | |
| at org.eclipse.persistence.internal.jpa.metadata.listeners.BeanValidationListener.preUpdate(BeanValidationListener.java:72) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyListener(DescriptorEventManager.java:721) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.notifyEJB30Listeners(DescriptorEventManager.java:691) | |
| at org.eclipse.persistence.descriptors.DescriptorEventManager.executeEvent(DescriptorEventManager.java:229) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChanges(DeferredChangeDetectionPolicy.java:87) | |
| at org.eclipse.persistence.descriptors.changetracking.DeferredChangeDetectionPolicy.calculateChangesForExistingObject(DeferredChangeDetectionPolicy.java:56) | |
| at org.eclipse.persistence.internal.sessions.UnitOfWorkImpl.calculateChanges(UnitOfWorkImpl.java:664) | |
| at org.eclipse.persistence.internal.sessions.RepeatableWriteUnitOfWork.writeChanges(RepeatableWriteUnitOfWork.java:438) | |
| at org.eclipse.persistence.internal.jpa.EntityManagerImpl.flush(EntityManagerImpl.java:863) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.performPreQueryFlush(QueryImpl.java:963) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.executeReadQuery(QueryImpl.java:207) | |
| at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:517) | |
| ... 104 more | |
| |#] | |
| [#|2019-04-12T16:59:54.560+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394560;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.560+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394560;_LevelValue=800;| | |
| caused by... javax.ejb.TransactionRolledbackLocalException: Exception thrown from bean|#] | |
| [#|2019-04-12T16:59:54.560+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394560;_LevelValue=800;| | |
| caused by... javax.persistence.PersistenceException: javax.validation.ConstraintViolationException: Bean Validation constraint(s) violated while executing Automatic Bean Validation on callback event:'preUpdate'. Please refer to embedded ConstraintViolations for details.|#] | |
| [#|2019-04-12T16:59:54.561+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394561;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()|#] | |
| [#|2019-04-12T16:59:54.561+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394561;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy202.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findRootDataverseCached(IndexServiceBean.java:1398) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1208) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.findPathSegments(IndexServiceBean.java:1212) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:667) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:582) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.561+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394561;_LevelValue=800;| | |
| caught javax.ejb.EJBTransactionRolledbackException|#] | |
| [#|2019-04-12T16:59:54.561+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394561;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB DatasetLinkingServiceBean, method: public java.util.List edu.harvard.iq.dataverse.DatasetLinkingServiceBean.findLinkingDataverses(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.562+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394562;_LevelValue=900;| | |
| javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:582) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| |#] | |
| [#|2019-04-12T16:59:54.562+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394562;_LevelValue=900;_MessageID=AS-EJB-00056;| | |
| A system exception occurred during an invocation on EJB IndexServiceBean, method: public java.util.concurrent.Future edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(java.lang.Long)|#] | |
| [#|2019-04-12T16:59:54.562+0000|WARNING|glassfish 4.1|javax.enterprise.ejb.container|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394562;_LevelValue=900;| | |
| javax.ejb.EJBTransactionRolledbackException | |
| at com.sun.ejb.containers.BaseContainer.mapLocal3xException(BaseContainer.java:2342) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2123) | |
| at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy316.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetLinkingServiceBean__Intf____Bean__.findLinkingDataverses(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.addOrUpdateDataset(IndexServiceBean.java:673) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDataset(IndexServiceBean.java:582) | |
| at edu.harvard.iq.dataverse.search.IndexServiceBean.indexDatasetInNewTransaction(IndexServiceBean.java:286) | |
| at sun.reflect.GeneratedMethodAccessor242.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88) | |
| at com.sun.proxy.$Proxy206.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.__EJB31_Generated__IndexServiceBean__Intf____Bean__.indexDatasetInNewTransaction(Unknown Source) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:147) | |
| at edu.harvard.iq.dataverse.search.IndexBatchServiceBean.indexAllOrSubset(IndexBatchServiceBean.java:51) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081) | |
| at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153) | |
| at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786) | |
| at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:73) | |
| at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) | |
| at sun.reflect.GeneratedMethodAccessor111.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) | |
| at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) | |
| at sun.reflect.GeneratedMethodAccessor110.invoke(Unknown Source) | |
| at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at java.lang.reflect.Method.invoke(Method.java:498) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883) | |
| at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822) | |
| at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369) | |
| at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758) | |
| at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746) | |
| at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) | |
| at java.util.concurrent.FutureTask.run(FutureTask.java:266) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) | |
| at java.lang.Thread.run(Thread.java:748) | |
| Caused by: javax.ejb.TransactionRolledbackLocalException: Client's transaction aborted | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.useClientTx(EJBContainerTransactionManager.java:357) | |
| at com.sun.ejb.containers.EJBContainerTransactionManager.preInvokeTx(EJBContainerTransactionManager.java:251) | |
| at com.sun.ejb.containers.BaseContainer.preInvokeTx(BaseContainer.java:4524) | |
| at com.sun.ejb.containers.BaseContainer.preInvoke(BaseContainer.java:1986) | |
| at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:210) | |
| ... 72 more | |
| |#] | |
| [#|2019-04-12T16:59:54.562+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394562;_LevelValue=800;| | |
| FAILURE indexing dataset 27 of 68 (id=42) Exception info: null|#] | |
| [#|2019-04-12T16:59:54.562+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394562;_LevelValue=800;| | |
| indexing dataset 28 of 68 (id=346)|#] | |
| [#|2019-04-12T16:59:54.803+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088394803;_LevelValue=800;| | |
| indexing dataset 29 of 68 (id=356)|#] | |
| [#|2019-04-12T16:59:55.369+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088395369;_LevelValue=800;| | |
| indexing dataset 30 of 68 (id=374)|#] | |
| [#|2019-04-12T16:59:55.940+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088395940;_LevelValue=800;| | |
| indexing dataset 31 of 68 (id=380)|#] | |
| [#|2019-04-12T16:59:56.289+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088396289;_LevelValue=800;| | |
| indexing dataset 32 of 68 (id=416)|#] | |
| [#|2019-04-12T16:59:56.720+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088396720;_LevelValue=800;| | |
| indexing dataset 33 of 68 (id=418)|#] | |
| [#|2019-04-12T16:59:57.014+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088397014;_LevelValue=800;| | |
| indexing dataset 34 of 68 (id=420)|#] | |
| [#|2019-04-12T16:59:57.341+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088397341;_LevelValue=800;| | |
| indexing dataset 35 of 68 (id=423)|#] | |
| [#|2019-04-12T16:59:57.625+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088397625;_LevelValue=800;| | |
| indexing dataset 36 of 68 (id=429)|#] | |
| [#|2019-04-12T17:00:01.011+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088401011;_LevelValue=800;| | |
| indexing dataset 37 of 68 (id=637)|#] | |
| [#|2019-04-12T17:00:01.257+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088401257;_LevelValue=800;| | |
| indexing dataset 38 of 68 (id=639)|#] | |
| [#|2019-04-12T17:00:01.503+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088401503;_LevelValue=800;| | |
| indexing dataset 39 of 68 (id=641)|#] | |
| [#|2019-04-12T17:00:01.821+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088401821;_LevelValue=800;| | |
| indexing dataset 40 of 68 (id=647)|#] | |
| [#|2019-04-12T17:00:02.354+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088402354;_LevelValue=800;| | |
| indexing dataset 41 of 68 (id=664)|#] | |
| [#|2019-04-12T17:00:02.764+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088402764;_LevelValue=800;| | |
| indexing dataset 42 of 68 (id=693)|#] | |
| [#|2019-04-12T17:00:03.028+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088403028;_LevelValue=800;| | |
| indexing dataset 43 of 68 (id=694)|#] | |
| [#|2019-04-12T17:00:03.237+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088403237;_LevelValue=800;| | |
| indexing dataset 44 of 68 (id=707)|#] | |
| [#|2019-04-12T17:00:03.488+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088403488;_LevelValue=800;| | |
| indexing dataset 45 of 68 (id=712)|#] | |
| [#|2019-04-12T17:00:03.721+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088403721;_LevelValue=800;| | |
| indexing dataset 46 of 68 (id=715)|#] | |
| [#|2019-04-12T17:00:03.968+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088403968;_LevelValue=800;| | |
| indexing dataset 47 of 68 (id=769)|#] | |
| [#|2019-04-12T17:00:04.346+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088404346;_LevelValue=800;| | |
| indexing dataset 48 of 68 (id=776)|#] | |
| [#|2019-04-12T17:00:04.603+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088404603;_LevelValue=800;| | |
| indexing dataset 49 of 68 (id=779)|#] | |
| [#|2019-04-12T17:00:04.798+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088404798;_LevelValue=800;| | |
| indexing dataset 50 of 68 (id=781)|#] | |
| [#|2019-04-12T17:00:05.114+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088405114;_LevelValue=800;| | |
| indexing dataset 51 of 68 (id=794)|#] | |
| [#|2019-04-12T17:00:05.355+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088405355;_LevelValue=800;| | |
| indexing dataset 52 of 68 (id=812)|#] | |
| [#|2019-04-12T17:00:05.551+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088405551;_LevelValue=800;| | |
| indexing dataset 53 of 68 (id=815)|#] | |
| [#|2019-04-12T17:00:07.416+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088407416;_LevelValue=800;| | |
| indexing dataset 54 of 68 (id=816)|#] | |
| [#|2019-04-12T17:00:07.596+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088407596;_LevelValue=800;| | |
| indexing dataset 55 of 68 (id=968)|#] | |
| [#|2019-04-12T17:00:07.856+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088407856;_LevelValue=800;| | |
| indexing dataset 56 of 68 (id=982)|#] | |
| [#|2019-04-12T17:00:08.092+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088408092;_LevelValue=800;| | |
| indexing dataset 57 of 68 (id=1046)|#] | |
| [#|2019-04-12T17:00:08.294+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088408294;_LevelValue=800;| | |
| indexing dataset 58 of 68 (id=1089)|#] | |
| [#|2019-04-12T17:00:08.480+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088408480;_LevelValue=800;| | |
| indexing dataset 59 of 68 (id=1093)|#] | |
| [#|2019-04-12T17:00:08.767+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088408767;_LevelValue=800;| | |
| indexing dataset 60 of 68 (id=1100)|#] | |
| [#|2019-04-12T17:00:08.930+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088408930;_LevelValue=800;| | |
| indexing dataset 61 of 68 (id=1101)|#] | |
| [#|2019-04-12T17:00:09.120+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088409120;_LevelValue=800;| | |
| indexing dataset 62 of 68 (id=1104)|#] | |
| [#|2019-04-12T17:00:09.353+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088409353;_LevelValue=800;| | |
| indexing dataset 63 of 68 (id=1109)|#] | |
| [#|2019-04-12T17:00:09.540+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088409540;_LevelValue=800;| | |
| indexing dataset 64 of 68 (id=1115)|#] | |
| [#|2019-04-12T17:00:09.733+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088409733;_LevelValue=800;| | |
| indexing dataset 65 of 68 (id=1120)|#] | |
| [#|2019-04-12T17:00:09.976+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088409976;_LevelValue=800;| | |
| indexing dataset 66 of 68 (id=1122)|#] | |
| [#|2019-04-12T17:00:10.208+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088410208;_LevelValue=800;| | |
| indexing dataset 67 of 68 (id=1123)|#] | |
| [#|2019-04-12T17:00:10.384+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088410384;_LevelValue=800;| | |
| indexing dataset 68 of 68 (id=1126)|#] | |
| [#|2019-04-12T17:00:10.669+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088410669;_LevelValue=800;| | |
| done iterating through all datasets|#] | |
| [#|2019-04-12T17:00:10.669+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088410669;_LevelValue=800;| | |
| index all took 21801 milliseconds|#] | |
| [#|2019-04-12T17:00:10.669+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088410669;_LevelValue=800;| | |
| There were index failures. 0 dataverse(s) and 24 dataset(s) failed to index. Please check the log for more information.|#] | |
| [#|2019-04-12T17:00:10.669+0000|INFO|glassfish 4.1|edu.harvard.iq.dataverse.search.IndexBatchServiceBean|_ThreadID=125;_ThreadName=__ejb-thread-pool1;_TimeMillis=1555088410669;_LevelValue=800;| | |
| 29 dataverses and 68 datasets indexed. index all took 21801 milliseconds. Solr index was not cleared before indexing. | |
| |#] |
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