Installation of `Kokkos`, `Silo`, parallel `hdf5`, `Cabana` on Ubuntu machine

kokkos_silo_parallel_hdf5_cabana_ubuntu_22_installation.md

Kokkos installation

add the following to the bashrc file

1. Add the following line to the bashrc

export KOKKOS_INSTALL_DIR=/home/dinesh/post_doc/softwares/kokkos/build/install

2. Execute the following in the terminal

cmake \
      -D CMAKE_BUILD_TYPE="Release" \
      -D CMAKE_INSTALL_PREFIX=$KOKKOS_INSTALL_DIR \
      -D Kokkos_ENABLE_OPENMP=ON \
      -D Kokkos_ENABLE_SERIAL=ON \
      .. ;

Silo installation

3. add to bashrc

export SILO_INSTALL_DIR=/home/dinesh/post_doc/softwares/Silo

4. To install follow

https://github.com/LLNL/Silo/blob/main/INSTALL

4a) ./configure 4b) make 4c) make install

Install Hdf5

Follow this

https://accserv.lepp.cornell.edu/svn/packages/hdf5/release_docs/INSTALL_parallel

Download the source

Add the following to bashrc

export HDF_INSTALL_DIR=/home/dinesh/post_doc/softwares/hdf5/

5. CC=/usr/bin/mpicc ./configure --enable-parallel --prefix=/home/dinesh/post_doc/softwares/hdf5/install
6. make
7. make install

Cabana installation

add the following to the bashrc file

5. Add the following line to the bashrc

export CABANA_INSTALL_DIR=/home/dinesh/post_doc/softwares/Cabana/build/install

6. Execute the following in the terminal

cmake \
      -D CMAKE_BUILD_TYPE="Debug" \
      -D CMAKE_PREFIX_PATH="$KOKKOS_INSTALL_DIR;$SILO_INSTALL_DIR;$HDF_INSTALL_DIR" \
      -D CMAKE_INSTALL_PREFIX="$CABANA_INSTALL_DIR" \
      -D Cabana_REQUIRE_OPENMP=ON \
      -D Cabana_ENABLE_EXAMPLES=ON \
      -D Cabana_ENABLE_TESTING=OFF \
      -D Cabana_REQUIRE_SILO=ON \
      -D Cabana_REQUIRE_HDF5=ON \
      -D Cabana_ENABLE_PERFORMANCE_TESTING=OFF \
      -D Cabana_ENABLE_CAJITA=ON \
      .. ;

Rigid body

export CABANA_INSTALL_DIR=/home/dinesh/post_doc/softwares/Cabana/build/install

cmake \
    -D CMAKE_PREFIX_PATH="$CABANA_INSTALL_DIR" \
    -D CMAKE_INSTALL_PREFIX=install \
    .. ;