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MATLAB function to calculate framewise displacement from 6 motion parameters
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function [mat, fwd_percent] = fwd(subj_numb, filename, exit_file, csv_file, run) | |
mat = textread(filename); | |
radius = 50; %mm | |
ts = mat; | |
temp = mat(:,4:6)*180/pi; %convert to degrees | |
temp = (2*radius*pi/360)*temp; | |
ts(:,4:6) = temp; | |
dts = diff(ts); | |
fwd = sum(abs(dts),2); | |
a = 0.0; | |
fwd = [a;fwd]; | |
mat = [mat fwd]; | |
fwd_1 = fwd>0.2; | |
fwd_ex = fwd(fwd_1); | |
fwd_percent = (size(fwd_ex)/size(fwd))*100; | |
fwd_percent = round(fwd_percent); | |
fid = fopen(exit_file,'a+'); | |
fprintf(fid,'%s has %d percent volumes higher than 0.2 in %s\n',subj_numb,fwd_percent,run); | |
fclose(fid); | |
mat = array2table(mat); | |
writetable(mat,csv_file) | |
end |
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