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December 4, 2016 09:34
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Documentation added to describe each class and step-by-step conversion, testing, and validation of the ABC pathway
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| { | |
| "elements": { | |
| "nodes": [ | |
| { | |
| "data": { | |
| "id": "graphDescriptor", | |
| "orgid": "ABC" | |
| }, | |
| "position": { | |
| "x": 0, | |
| "y": 0 | |
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| "selectable": true, | |
| "locked": false, | |
| "grabbable": true, | |
| "classes": "graphDescriptor" | |
| }, | |
| { | |
| "data": { | |
| "id": "CPD1834-1281752--PWY1834-3", | |
| "label": "A", | |
| "parent": "PWY1834-3", | |
| "frame-id": "CPD1834-1", | |
| "ttipData": [ | |
| { | |
| "hdr": "Compound", | |
| "data": [ | |
| { | |
| "id": "CPD1834-1", | |
| "text": "A" | |
| } | |
| ] | |
| }, | |
| { | |
| "hdr": "Pathway", | |
| "data": [ | |
| { | |
| "id": "PWY1834-3", | |
| "text": "ABC Pathway" | |
| } | |
| ] | |
| } | |
| ] | |
| }, | |
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| "y": 484.7902097902098 | |
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| "selectable": true, | |
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| "grabbable": true, | |
| "classes": "cpd circle unfilled hiZoom" | |
| }, | |
| { | |
| "data": { | |
| "id": "F281754--PWY1834-3", | |
| "label": "F", | |
| "parent": "PWY1834-3", | |
| "frame-id": "F", | |
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| { | |
| "hdr": "Compound", | |
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| { | |
| "id": "F", | |
| "text": "F" | |
| } | |
| ] | |
| }, | |
| { | |
| "hdr": "Pathway", | |
| "data": [ | |
| { | |
| "id": "PWY1834-3", | |
| "text": "ABC Pathway" | |
| } | |
| ] | |
| } | |
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| "y": 724.9225297898728 | |
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| "selectable": true, | |
| "locked": false, | |
| "grabbable": true, | |
| "classes": "cpd circle unfilled hiZoom" | |
| }, | |
| { | |
| "data": { | |
| "id": "G281740--PWY1834-3", | |
| "label": "A->C: G3", | |
| "parent": "PWY1834-3", | |
| "frame-id": "G1834-21-MONOMER", | |
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| { | |
| "hdr": "Protein", | |
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| { | |
| "id": "G1834-21-MONOMER", | |
| "text": "R3" | |
| } | |
| ] | |
| }, | |
| { | |
| "hdr": "Gene", | |
| "data": [ | |
| { | |
| "id": "G1834-21", | |
| "text": "G3" | |
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| "classes": "noIcon enz hiZoom" | |
| }, | |
| { | |
| "data": { | |
| "id": "G281734--PWY1834-3", | |
| "label": "C->D: G7", | |
| "parent": "PWY1834-3", | |
| "frame-id": "G1834-25-MONOMER", | |
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| { | |
| "hdr": "Protein", | |
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| { | |
| "id": "G1834-25-MONOMER", | |
| "text": "R7" | |
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| ] | |
| }, | |
| { | |
| "hdr": "Gene", | |
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| { | |
| "id": "G1834-25", | |
| "text": "G7" | |
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| "classes": "noIcon enz hiZoom" | |
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| { | |
| "data": { | |
| "id": "G281728--PWY1834-3", | |
| "label": "F[cytosol]->\nF[extracellular]:\nG9", | |
| "parent": "PWY1834-3", | |
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| "parent": "PWY1834-3", | |
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| }, | |
| { | |
| "hdr": "Pathway", | |
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| "id": "PWY1834-3", | |
| "text": "ABC Pathway" | |
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| { | |
| "data": { | |
| "id": "CPD1834-4281755--PWY1834-3", | |
| "label": "D", | |
| "parent": "PWY1834-3", | |
| "frame-id": "CPD1834-4", | |
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| "hdr": "Compound", | |
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| { | |
| "id": "CPD1834-4", | |
| "text": "D" | |
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| }, | |
| { | |
| "hdr": "Pathway", | |
| "data": [ | |
| { | |
| "id": "PWY1834-3", | |
| "text": "ABC Pathway" | |
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| { | |
| "data": { | |
| "id": "CPD1834-3281749--PWY1834-3", | |
| "label": "C", | |
| "parent": "PWY1834-3", | |
| "frame-id": "CPD1834-3", | |
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| "hdr": "Compound", | |
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| "hdr": "Pathway", | |
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| "id": "PWY1834-3", | |
| "text": "ABC Pathway" | |
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| { | |
| "data": { | |
| "id": "B281750--PWY1834-3", | |
| "label": "B", | |
| "parent": "PWY1834-3", | |
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| }, | |
| { | |
| "hdr": "Pathway", | |
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| { | |
| "id": "PWY1834-3", | |
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| }, | |
| { | |
| "data": { | |
| "id": "CPD1834-1281753--PWY1834-3", | |
| "label": "A", | |
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| "hdr": "Compound", | |
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| }, | |
| { | |
| "hdr": "Pathway", | |
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| "hdr": "Gene", | |
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| { | |
| "data": { | |
| "id": "G281744--PWY1834-3", | |
| "label": "A[extracellular] -\n> A[cytosol]: G1", | |
| "parent": "PWY1834-3", | |
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| { | |
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| "label": "B+E->\n2D: G4", | |
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| { | |
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| "id": "CPD1834-5281748--PWY1834-3", | |
| "label": "E", | |
| "parent": "PWY1834-3", | |
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| { | |
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| { | |
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| "id": "G281730--PWY1834-3", | |
| "label": "D[cytosol] ->\nD[extracellular]:\nG8", | |
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| { | |
| "data": { | |
| "id": "G281742--PWY1834-3", | |
| "label": "A->B: G2", | |
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