Created
September 1, 2018 17:17
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Max-Spacing K-Clustering Algorithm
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class UnionFind: | |
def __init__(self, ids): | |
self._id = {i: i for i in ids} # pointer to the leader | |
self.sizes = {i: 1 for i in ids} | |
self.n_components = len(set(self._id)) | |
def _root(self, i): | |
j = i | |
while (j != self._id[j]): | |
self._id[j] = self._id[self._id[j]] | |
j = self._id[j] | |
return j | |
def find(self, p): | |
return self._root(p) | |
def union(self, p, q): | |
i = self._root(p) | |
j = self._root(q) | |
if (self.sizes[i] < self.sizes[j]): | |
self._id[i] = j | |
self.sizes[j] = self.sizes[j] + self.sizes.pop(i) | |
else: | |
self._id[j] = i | |
self.sizes[i] = self.sizes[i] + self.sizes.pop(j) | |
self.n_components -= 1 | |
def max_spacing_k_clustering(k, graph): | |
uf = UnionFind(graph.nodes) | |
edges = sorted(graph.edges, key=lambda e: e.cost) | |
while uf.n_components > k: | |
max_edge = edges.pop(0) # pre-sorted | |
n1, n2, cost = max_edge | |
if uf.find(n1) != uf.find(n2): | |
uf.union(n1, n2) | |
spacings = [] | |
# remaining edge costs will contain spacings | |
while len(spacings) < uf.n_components: | |
max_edge = edges.pop(0) | |
n1, n2, cost = max_edge | |
if uf.find(n1) != uf.find(n2): | |
spacings.append(cost) | |
return spacings[0], uf |
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