script for octotiger

gistfile1.txt

set -x

source /usr/local/packages/compilers/Intel/parallel_studio_xe_2015/composer_xe_2015.0.090/bin/compilervars.sh intel64
source /usr/local/packages/compilers/Intel/parallel_studio_xe_2015/composer_xe_2015.0.090/bin/releasegervars.sh intel64
source /usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/bin64/mpivars.sh

rm -r -f hpx_build
rm -r -f release
mkdir hpx_build

cd hpx_build
wget https://sourceforge.net/projects/boost/files/boost/1.57.0/boost_1_57_0.tar.gz/download --no-check-certificate
rm -r boost_1_57_0
tar -xvf boost_1_57_0.tar.gz
cd boost_1_57_0
./bootstrap.sh --prefix=/work/$USER/release
./b2 toolset=intel variant=release cflags="-xHOST -O3" cxxflags="-xHOST -O3" install -j20
cd ..

mkdir hpx
git clone https://github.com/STEllAR-GROUP/hpx
rm -r build
mkdir build
cd build
cmake \
      -DCMAKE_CXX_COMPILER="/usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/intel64/bin/mpiicpc"                                              \
      -DCMAKE_C_COMPILER="/usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/intel64/bin/mpiicc"                                                 \
      -DCMAKE_C_FLAGS="-xHOST -O3  -mt_mpi -gcc-name=gcc"                                                                                                            \
      -DCMAKE_CXX_FLAGS="-xHOST -O3  -mt_mpi -std=c++11 -gxx-name=gcc"                                                                                                            \
      -DCMAKE_BUILD_TYPE=Release                                                                                                                                \
      -DHPX_WITH_PARCELPORT_MPI=ON  \
      -DCMAKE_INSTALL_PREFIX="/work/$USER/release/"                                   \
      -DBOOST_ROOT="/work/$USER/release/" \
      -DHPX_WITH_MALLOC=custom \
      -DHPX_WITH_HWLOC=ON                                                \
      -DHPX_WITH_EXAMPLES=OFF \
      -DHPX_WITH_TESTS=OFF\
       ../hpx

make -j20 install

cd /work/$USER/


rm -rf octotiger
git clone https://github.com/dmarce1/octotiger

cd octotiger
wget phys.lsu.edu/~dmarcel/X.0.chk.gz 
wget phys.lsu.edu/~dmarcel/pbs_script
cp pbs_script ~/octotiger_script
gunzip -f X.0.chk.gz
mv X.0.chk restart.chk
set -x

rm -r build
mkdir build



cd build

cmake -DCMAKE_CXX_COMPILER=mpiicpc -DCMAKE_PREFIX_PATH=/work/$USER/release ..  \
      -DCMAKE_CXX_COMPILER="/usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/intel64/bin/mpiicpc"                                              \
      -DCMAKE_C_COMPILER="/usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/intel64/bin/mpiicc"                                                 \
      -DCMAKE_C_FLAGS="-xHOST -O3 -mt_mpi -gcc-name=gcc"                                \
      -DCMAKE_CXX_FLAGS="-xHOST -O3 -std=c++11 -mt_mpi -gxx-name=g++"                                

make -j20
cp octotiger ..
cd ..
#chmod 755 octotiger_script
#./octotiger_script
ssh smic "qsub ~/octotiger_script"