octotiger build script

gistfile1.txt

set -x

function pause(){
   read -p "$*"
}
 


source /usr/local/packages/compilers/Intel/parallel_studio_xe_2015/composer_xe_2015.0.090/bin/compilervars.sh intel64
#source /usr/local/packages/compilers/Intel/parallel_studio_xe_2015/composer_xe_2015.0.090/bin/releasegervars.sh intel64
source /usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/bin64/mpivars.sh

rm -r -f hpx_build

rm -r -f release
mkdir hpx_build


cd hpx_build

echo "Press any key to start building hwloc"
#pause


wget https://www.open-mpi.org/software/hwloc/v1.11/downloads/hwloc-1.11.2.tar.gz --no-check-certificate
tar -xvf hwloc-1.11.2.tar.gz
cd hwloc-1.11.2
./configure --prefix=/work/$USER/release/ CC="icc -gcc-name=gcc " CFLAGS="-O3 -ip -xHOST"
make -j40 install
cd ..

echo "Press any key to start building boost"
#pause

#wget https://sourceforge.net/projects/boost/files/boost/1.59.0/boost_1_59_0.tar.gz/download --no-check-certificate
cp ~/boost_1_59_0.tar.gz .
cp /work/dmarce1/boost_1_59_0.tar.gz .
rm -r boost_1_59_0
tar -xvf boost_1_59_0.tar.gz
cd boost_1_59_0
./bootstrap.sh --prefix=/work/$USER/release
./b2 toolset=intel variant=release cxxflags="-gxx-name=g++  -O3 -ip -xHOST "  install -j40
cd ..

echo "Press any key to start building hpx"
#pause


mkdir hpx
git clone https://github.com/STEllAR-GROUP/hpx
cd hpx
git checkout e657426d705dd2292109ff18e271ccaa5339f7ef
cd ..
rm -r build
mkdir build
cd build
cmake \
      -DCMAKE_CXX_COMPILER="/usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/intel64/bin/mpiicpc"                                              \
      -DCMAKE_C_COMPILER="/usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/intel64/bin/mpiicc"                                                 \
      -DCMAKE_C_FLAGS="-mt_mpi -gcc-name=gcc  -O3 -ip -xHOST "                                                                                                            \
      -DCMAKE_CXX_FLAGS="-mt_mpi -std=c++11 -gxx-name=g++ -O3 -ip -xHOST "                                                                                                            \
      -DCMAKE_BUILD_TYPE=release                                                                                                                                \
      -DHPX_WITH_PARCELPORT_MPI=ON  \
      -DCMAKE_INSTALL_PREFIX="/work/$USER/release/"                                   \
      -DBOOST_ROOT="/work/$USER/release/" \
      -DHWLOC_ROOT="/work/$USER/release/" \
      -DHPX_WITH_MALLOC=custom \
      -DHPX_WITH_HWLOC=ON                                                \
      -DHPX_WITH_EXAMPLES=OFF \
      -DHPX_WITH_TESTS=OFF\
       ../hpx

make -j40 install


echo "Press any key to start building octotiger"
pause


cd /work/$USER/



rm -rf octotiger
git clone https://github.com/dmarce1/octotiger

cd octotiger


wget phys.lsu.edu/~dmarcel/X.0.chk.gz 
wget phys.lsu.edu/~dmarcel/pbs_script
cp pbs_script ~/octotiger_script
gunzip -f X.0.chk.gz
mv X.0.chk restart.chk
set -x

rm -r build
mkdir build



cd build

cmake -DCMAKE_CXX_COMPILER=mpiicpc -DCMAKE_PREFIX_PATH=/work/$USER/release ..  \
      -DCMAKE_CXX_COMPILER="/usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/intel64/bin/mpiicpc"                                              \
      -DCMAKE_C_COMPILER="/usr/local/compilers/Intel/parallel_studio_xe_2015/impi/5.0.1.035/intel64/bin/mpiicc"                                                 \
      -DCMAKE_BUILD_TYPE=release                                                                                                                                \
      -DCMAKE_C_FLAGS="-xHOST -mt_mpi -gcc-name=gcc  -O3 -ip  "                                \
      -DCMAKE_CXX_FLAGS="-xHOST -std=c++11 -mt_mpi -gxx-name=g++ -O3 -ip  "                                

make -j40
cp octotiger ..
cd ..
chmod 755 octotiger_script
cd
qsub ./octotiger_script