Created
September 16, 2015 13:57
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agas seg fault
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{stack-trace}: 4 frames: | |
0x2ae2d315921f : hpx::detail::backtrace(unsigned long) + 0x7f in /home/dmarce1/lib/libhpx.so.0 | |
0x2ae2d315a79d : boost::exception_ptr hpx::detail::get_exception<hpx::exception>(hpx::exception const&, std::string const&, std::string const&, long, std::string const&) + 0x23d in /home/dmarce1/lib/libhpx.so.0 | |
0x2ae2d315a36c : void hpx::detail::throw_exception<hpx::exception>(hpx::exception const&, std::string const&, std::string const&, long) + 0x10c in /home/dmarce1/lib/libhpx.so.0 | |
0x2ae2d392bd36 : hpx::agas::server::primary_namespace::resolve_free_list(boost::unique_lock<hpx::lcos::local::spinlock>&, std::list<std::_Rb_tree_iterator<std::pair<hpx::naming::gid_type const, long> >, std::allocator<std::_Rb_tree_iterator<std::pair<hpx::naming::gid_type const, long> > > > const&, std::list<hpx::agas::server::primary_namespace::free_entry, std::allocator<hpx::agas::server::primary_namespace::free_entry> >&, hpx::naming::gid_type const&, hpx::naming::gid_type const&, hpx::error_code&) + 0x1316 in /home/dmarce1/lib/libhpx.so.0 | |
{env}: 104 entries: | |
ACLOCAL_PATH=/usr/local/packages/cmake/2.8.12/INTEL-14.0.2/share/aclocal | |
BASH_FUNC_module()=() { eval `/usr/local/packages/Modules/$MODULE_VERSION/bin/modulecmd bash $*` | |
} | |
@ | |
1067,1 65% | |
LIBRARY_PATH=/home/dmarce1/lib:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/compiler/lib/intel64:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/ipp/../compiler/lib/intel64:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/ipp/lib/intel64:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/compiler/lib/intel64:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/mkl/lib/intel64:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/tbb/lib/intel64/gcc4.4:/usr/local/packages/mvapich2/2.0/INTEL-14.0.2/lib:/usr/local/packages/hwloc/1.10.0/INTEL-14.0.2-mic//lib:/usr/local/compilers/gcc/4.9.0/lib64:/usr/local/compilers/gcc/4.9.0/lib:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/compiler/lib/intel64:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/mkl/lib/intel64 | |
LM_LICENSE_FILE=/usr/local/compilers/pgi/license.dat | |
LOADEDMODULES=gcc/4.9.0:intel/14.0.2:cmake/2.8.12/INTEL-14.0.2:hwloc/1.10.0/INTEL-14.0.2-mic:mvapich2/2.0/INTEL-14.0.2 | |
LOGNAME=dmarce1 | |
MAIL=/var/spool/mail/dmarce1 | |
MANPATH=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/man/en_US:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/man/en_US:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/debugger/gdb/intel64/share/man/:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/debugger/gdb/intel64_mic/share/man/:/usr/local/packages/mvapich2/2.0/INTEL-14.0.2/share/man:/usr/local/packages/hwloc/1.10.0/INTEL-14.0.2-mic//share/man:/usr/local/packages/cmake/2.8.12/INTEL-14.0.2/man:/usr/local/compilers/gcc/4.9.0/share/man:/usr/local/compilers/pgi/linux86-64/man:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/man/en_US:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/man/en_US: | |
MIC_LD_LIBRARY_PATH=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/compiler/lib/mic:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/mpirt/lib/mic:/opt/intel/mic/coi/device-linux-release/lib:/opt/intel/mic/myo/lib:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/ipp/lib/lib/mic:/opt/intel/mic/coi/device-linux-release/lib:/opt/intel/mic/myo/lib:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/compiler/lib/mic:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/mkl/lib/mic:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/tbb/lib/mic:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/compiler/lib/mic:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/mkl/lib/mic | |
MIC_LIBRARY_PATH=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/compiler/lib/mic:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/mpirt/lib/mic:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/tbb/lib/mic | |
MKLROOT=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/mkl | |
MOABHOMEDIR=/usr/moab | |
MODULEPATH=/usr/local/packages/Modules/modulefiles/apps:/usr/local/packages/Modules/modulefiles/admin:/usr/local/packages/Modules/modulefiles/xsede | |
MODULESHOME=/usr/local/packages/Modules/3.2.10 | |
MODULE_VERSION=3.2.10 | |
MODULE_VERSION_STACK=3.2.10 | |
MPIR_CVAR_CH3_INTERFACE_HOSTNAME=smic288 | |
MPM_LAUNCHER=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/debugger/mpm/bin/start_mpm.sh | |
MV2_COMM_WORLD_LOCAL_RANK=0 | |
MV2_COMM_WORLD_LOCAL_SIZE=1 | |
MV2_COMM_WORLD_RANK=59 | |
MV2_COMM_WORLD_SIZE=128 | |
MV2_IBA_HCA=mlx4_0 | |
NLSPATH=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/compiler/lib/intel64/locale/%l_%t/%N:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/ipp/lib/intel64/locale/%l_%t/%N:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/mkl/lib/intel64/locale/%l_%t/%N:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/debugger/gdb/intel64_mic/share/locale/%l_%t/%N:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/debugger/gdb/intel64/share/locale/%l_%t/%N:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/compiler/lib/intel64/locale/en_US:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/mkl/lib/intel64/locale/en_US | |
OLDPWD=/home/dmarce1 | |
PATH=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/bin/intel64:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/debugger/gdb/intel64_mic/bin:/usr/lib64/qt-3.3/bin:/usr/local/packages/mvapich2/2.0/INTEL-14.0.2/bin:/usr/local/packages/hwloc/1.10.0/INTEL-14.0.2-mic//bin:/usr/local/packages/cmake/2.8.12/INTEL-14.0.2/bin:/usr/local/compilers/gcc/4.9.0/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/local/bin:/usr/local/compilers/pgi/linux86-64/6.1/bin:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/bin/intel64:/opt/ibutils/bin:/home/dmarce1/bin:/home/dmarce1/bin | |
PBS_ENVIRONMENT=PBS_BATCH | |
PBS_GPUFILE=/var/spool/torque/aux//48882.smic3gpu | |
PBS_JOBCOOKIE=A36A676B679F0FA57227E8601174B793 | |
PBS_JOBID=48882.smic3 | |
PBS_JOBNAME=job | |
PBS_MOMPORT=15003 | |
PBS_NODENUM=0 | |
PBS_NP=2560 | |
PBS_NUM_NODES=128 | |
PBS_NUM_PPN=20 | |
PBS_O_HOME=/home/dmarce1 | |
1148,3 70% | |
PBS_NUM_PPN=20 | |
PBS_O_HOME=/home/dmarce1 | |
PBS_O_HOST=smic1.hpc.lsu.edu | |
PBS_O_LANG=en_US.UTF-8 | |
PBS_O_LOGNAME=dmarce1 | |
PBS_O_MAIL=/var/spool/mail/dmarce1 | |
PBS_O_PATH=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/bin/intel64:/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/debugger/gdb/intel64_mic/bin:/usr/local/packages/hwloc/1.10.0/INTEL-14.0.2-mic//bin:/usr/local/packages/cmake/2.8.12/INTEL-14.0.2/bin:/usr/local/compilers/gcc/4.9.0/bin:/usr/lib64/qt-3.3/bin:/usr/local/packages/mvapich2/2.0/INTEL-14.0.2/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/local/bin:/usr/local/compilers/pgi/linux86-64/6.1/bin:/usr/local/compilers/Intel/cluster_studio_xe_2013.1.046/composer_xe_2013_sp1.2.144/bin/intel64:/opt/ibutils/bin:/opt/dell/srvadmin/bin:/home/dmarce1/bin:/home/dmarce1/bin:/usr/local/compilers/pgi/linux86-64/6.1/bin:/home/dmarce1/bin | |
PBS_O_QUEUE=checkpt | |
PBS_O_SHELL=/bin/bash | |
PBS_O_WORKDIR=/work/dmarce1/FVFMM/Release | |
PBS_QUEUE=checkpt | |
PBS_SERVER=smic3 | |
PBS_TASKNUM=1 | |
PBS_VERSION=TORQUE-3.0.6 | |
PBS_VNODENUM=0 | |
PBS_WALLTIME=21600 | |
PGI=/usr/local/compilers/pgi | |
PKG_CONFIG_PATH=/usr/local/packages/mvapich2/2.0/INTEL-14.0.2/lib/pkgconfig:/usr/local/packages/hwloc/1.10.0/INTEL-14.0.2-mic//lib/pkgconfig:/home/dmarce1/lib/pkgconfig | |
PMI_FD=5 | |
PMI_RANK=59 | |
PMI_SIZE=128 | |
PWD=/work/dmarce1/FVFMM/Release | |
QTDIR=/usr/lib64/qt-3.3 | |
QTINC=/usr/lib64/qt-3.3/include | |
QTLIB=/usr/lib64/qt-3.3/lib | |
SHELL=/bin/bash | |
SHLVL=2 | |
SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass | |
SSH_CLIENT=204.90.41.8 46428 22 | |
SSH_CONNECTION=204.90.41.8 46428 204.90.42.34 22 | |
TBBROOT=/usr/local/compilers/Intel/parallel_studio-2015u3/composer_xe_2015.3.187/tbb | |
USER=dmarce1 | |
_=/usr/local/packages/mvapich2/2.0/INTEL-14.0.2/bin/mpirun | |
_LMFILES_=/usr/local/packages/Modules/modulefiles/apps/gcc/4.9.0:/usr/local/packages/Modules/modulefiles/apps/intel/14.0.2:/usr/local/packages/Modules/modulefiles/apps/cmake/2.8.12/INTEL-14.0.2:/usr/local/packages/Modules/modulefiles/apps/hwloc/1.10.0/INTEL-14.0.2-mic:/usr/local/packages/Modules/modulefiles/apps/mvapich2/2.0/INTEL-14.0.2 | |
_MODULESBEGINENV_=/home/dmarce1/.modulesbeginenv | |
{locality-id}: 59 | |
{hostname}: [ (mpi:59) (tcp:127.0.0.1:7969) ] | |
{process-id}: 18395 | |
{function}: primary_namespace::resolve_free_list | |
{file}: /work/dmarce1/builds/hpx/src/runtime/agas/server/primary_namespace_server.cpp | |
{line}: 1012 | |
{os-thread}: 12, worker-thread#12 | |
{thread-id}: 00002ae2dea3f740 | |
{thread-description}: <unknown> | |
{state}: state_running | |
{auxinfo}: | |
{config}: | |
HPX_HAVE_NATIVE_TLS=ON | |
HPX_HAVE_STACKTRACES=ON | |
1181,3 72% | |
HPX_HAVE_NATIVE_TLS=ON | |
HPX_HAVE_STACKTRACES=ON | |
HPX_HAVE_COMPRESSION_BZIP2=OFF | |
HPX_HAVE_COMPRESSION_SNAPPY=OFF | |
HPX_HAVE_COMPRESSION_ZLIB=OFF | |
HPX_HAVE_PARCEL_COALESCING=ON | |
HPX_HAVE_PARCELPORT_TCP=ON | |
HPX_HAVE_PARCELPORT_MPI=ON (MPICH V3.1, MPI V3.0) | |
HPX_HAVE_PARCELPORT_IPC=OFF | |
HPX_HAVE_PARCELPORT_IBVERBS=OFF | |
HPX_HAVE_VERIFY_LOCKS=OFF | |
HPX_HAVE_HWLOC=ON | |
HPX_HAVE_ITTNOTIFY=OFF | |
HPX_HAVE_RUN_MAIN_EVERYWHERE=OFF | |
HPX_LIMIT=5 | |
HPX_PARCEL_MAX_CONNECTIONS=512 | |
HPX_PARCEL_MAX_CONNECTIONS_PER_LOCALITY=4 | |
HPX_INITIAL_AGAS_LOCAL_CACHE_SIZE=256 | |
HPX_AGAS_LOCAL_CACHE_SIZE_PER_THREAD=32 | |
HPX_HAVE_MALLOC=tbbmalloc | |
HPX_PREFIX (configured)=/work/dmarce1/builds/hpx_build | |
HPX_PREFIX=/home/dmarce1 | |
{version}: V0.9.11-trunk (AGAS: V3.0), Git: | |
{boost}: V1.59.0 | |
{build-type}: release | |
{date}: Sep 15 2015 14:55:30 | |
{platform}: linux | |
{compiler}: Intel C++ C++0x mode version 1500 | |
{stdlib}: GNU libstdc++ version 20140422 | |
{what}: primary_namespace::resolve_free_list, failed to resolve gid, gid({0000003c00000001, 0000000002dc13f6}): HPX(internal_server_error) |
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