Skip to content

Instantly share code, notes, and snippets.

@dmitry-osin
Last active December 11, 2018 13:14
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save dmitry-osin/cceeaeffa52cbb461abdb2c8292588c6 to your computer and use it in GitHub Desktop.
Save dmitry-osin/cceeaeffa52cbb461abdb2c8292588c6 to your computer and use it in GitHub Desktop.
NCBI
<?xml version="1.0" encoding="UTF-8" standalone="no"?><root><taxonomy name="NCBI"><term externalId="NCBI-131567"><synonym uniqueName="Bacteria &lt;prokaryotes&gt;">Bacteria</synonym><synonym uniqueName="Monera &lt;Bacteria&gt;">Monera</synonym><synonym uniqueName="Procaryotae &lt;Bacteria&gt;">Procaryotae</synonym><synonym uniqueName="Prokaryota &lt;Bacteria&gt;">Prokaryota</synonym><synonym uniqueName="Prokaryotae &lt;Bacteria&gt;">Prokaryotae</synonym><synonym uniqueName="bacteria &lt;blast2&gt;">bacteria</synonym><synonym uniqueName="">eubacteria</synonym><synonym uniqueName="prokaryote &lt;Bacteria&gt;">prokaryote</synonym><synonym uniqueName="prokaryotes &lt;Bacteria&gt;">prokaryotes</synonym></term><term externalId="NCBI-335928"><synonym uniqueName="">Azorhizobium</synonym><synonym uniqueName="">Azorhizobium Dreyfus et al. 1988 emend. Lang et al. 2013</synonym></term><term externalId="NCBI-6"><synonym uniqueName="ATCC 43989 &lt;type strain&gt;">ATCC 43989</synonym><synonym uniqueName="">Azorhizobium caulinodans</synonym><synonym uniqueName="">Azorhizobium caulinodans Dreyfus et al. 1988</synonym><synonym uniqueName="">Azotirhizobium caulinodans</synonym><synonym uniqueName="CCUG 26647 &lt;type strain&gt;">CCUG 26647</synonym><synonym uniqueName="DSM 5975 &lt;type strain&gt;">DSM 5975</synonym><synonym uniqueName="IFO 14845 &lt;type strain&gt;">IFO 14845</synonym><synonym uniqueName="JCM 20966 &lt;type strain&gt;">JCM 20966</synonym><synonym uniqueName="LMG 6465 &lt;type strain&gt;">LMG 6465</synonym><synonym uniqueName="LMG:6465 &lt;type strain&gt;">LMG:6465</synonym><synonym uniqueName="NBRC 14845 &lt;type strain&gt;">NBRC 14845</synonym><synonym uniqueName="ORS 571 &lt;type strain&gt;">ORS 571</synonym></term><term externalId="NCBI-32199"><synonym uniqueName="">Acyrthosiphon pisum symbiont P</synonym><synonym uniqueName="">Buchnera aphidicola</synonym><synonym uniqueName="">Buchnera aphidicola Munson et al. 1991</synonym><synonym uniqueName="">primary endosymbiont of Schizaphis graminum</synonym></term><term externalId="NCBI-1706371"><synonym uniqueName="">"Cellvibrio" Winogradsky 1929</synonym><synonym uniqueName="">Cellvibrio</synonym><synonym uniqueName="">Cellvibrio (ex Winogradsky 1929) Blackall et al. 1986 emend. Humphry et al. 2003</synonym><synonym uniqueName="">Cellvibrio (ex Winogradsky 1929) Blackall et al. 1986 emend. Suarez et al. 2014</synonym></term><term externalId="NCBI-1707"><synonym uniqueName="">"Cellulomonas gilvus" (Hulcher and King 1958) Christopherson et al. 2013</synonym><synonym uniqueName="">"Cellvibrio gilvus" Hulcher and King 1958</synonym><synonym uniqueName="ATCC 13127 &lt;type strain&gt;">ATCC 13127</synonym><synonym uniqueName="">Cellulomonas gilvus</synonym><synonym uniqueName="">Cellvibrio gilvus</synonym><synonym uniqueName="NRRL B-14078 &lt;type strain&gt;">NRRL B-14078</synonym><synonym uniqueName="">[Cellvibrio] gilvus</synonym></term><term externalId="NCBI-203488"><synonym uniqueName="">Dictyoglomus</synonym><synonym uniqueName="">Dictyoglomus Saiki et al. 1985</synonym></term><term externalId="NCBI-13"><synonym uniqueName="ATCC 35947 &lt;type strain&gt;">ATCC 35947</synonym><synonym uniqueName="DSM 3960 &lt;type strain&gt;">DSM 3960</synonym><synonym uniqueName="">Dictyoglomus thermophilum</synonym><synonym uniqueName="">Dictyoglomus thermophilum Saiki et al. 1985</synonym><synonym uniqueName="strain H-6-12 &lt;type strain&gt;">strain H-6-12</synonym></term><term externalId="NCBI-32011"><synonym uniqueName="">Methyliphilus</synonym><synonym uniqueName="">Methylophilus</synonym><synonym uniqueName="">Methylophilus Jenkins et al. 1987</synonym></term><term externalId="NCBI-16"><synonym uniqueName="ATCC 53528 &lt;type strain&gt;">ATCC 53528</synonym><synonym uniqueName="DSM 46235 &lt;type strain&gt;">DSM 46235</synonym><synonym uniqueName="LMG 6787 &lt;type strain&gt;">LMG 6787</synonym><synonym uniqueName="LMG:6787 &lt;type strain&gt;">LMG:6787</synonym><synonym uniqueName="">Methyliphilus methylitrophus</synonym><synonym uniqueName="">Methyliphilus methylotrophus</synonym><synonym uniqueName="">Methylophilus methylitrophus</synonym><synonym uniqueName="">Methylophilus methylotrophus</synonym><synonym uniqueName="">Methylophilus methylotrophus Jenkins et al. 1987</synonym><synonym uniqueName="">Methylophilus sp. CBMB147</synonym><synonym uniqueName="">Methylotrophus methylophilus</synonym><synonym uniqueName="NCIB 10515 &lt;type strain&gt;">NCIB 10515</synonym><synonym uniqueName="NCIB:10515 &lt;type strain&gt;">NCIB:10515</synonym><synonym uniqueName="NCIMB 10515 &lt;type strain&gt;">NCIMB 10515</synonym><synonym uniqueName="VKM B-1623 &lt;type strain&gt;">VKM B-1623</synonym></term><term externalId="NCBI-213421"><synonym uniqueName="">Pelobacter</synonym><synonym uniqueName="">Pelobacter Schink and Pfennig 1983</synonym></term><term externalId="NCBI-18"><synonym uniqueName="DSM 2380 &lt;type strain&gt;">DSM 2380</synonym><synonym uniqueName="NBRC 103641 &lt;type strain&gt;">NBRC 103641</synonym><synonym uniqueName="">Pelobacter carbinolicus</synonym><synonym uniqueName="">Pelobacter carbinolicus Schink 1984</synonym><synonym uniqueName="strain Gra Bd 1 &lt;type strain&gt;">strain Gra Bd 1</synonym></term><term externalId="NCBI-76892"><synonym uniqueName="">Phenylobacterium</synonym><synonym uniqueName="">Phenylobacterium Lingens et al. 1985 emend. Abraham et al. 2008</synonym><synonym uniqueName="">Phenylobacterium Lingens et al. 1985 emend. Kanso and Patel 2004</synonym><synonym uniqueName="">Phenylobacterium Lingens et al. 1985 emend. Oh and Roh 2012</synonym><synonym uniqueName="">Phenylobacterium Lingens et al. 1985 emend. Tiago et al. 2005</synonym></term><term externalId="NCBI-20"><synonym uniqueName="ATCC 35973 &lt;type strain&gt;">ATCC 35973</synonym><synonym uniqueName="CIP 103305 &lt;type strain&gt;">CIP 103305</synonym><synonym uniqueName="DSM 1986 &lt;type strain&gt;">DSM 1986</synonym><synonym uniqueName="LMG 6165 &lt;type strain&gt;">LMG 6165</synonym><synonym uniqueName="LMG:6165 &lt;type strain&gt;">LMG:6165</synonym><synonym uniqueName="">Phenylobacterium immobile</synonym><synonym uniqueName="">Phenylobacterium immobile Lingens et al. 1985</synonym><synonym uniqueName="strain E &lt;type strain&gt;">strain E</synonym></term><term externalId="NCBI-267890"><synonym uniqueName="">Shewanella</synonym><synonym uniqueName="">Shewanella MacDonell and Colwell 1986</synonym></term><term externalId="NCBI-22"><synonym uniqueName="ATCC 39565 &lt;type strain&gt;">ATCC 39565</synonym><synonym uniqueName="">Alteromonas colwelliana</synonym><synonym uniqueName="">Alteromonas colwelliana Weiner et al. 1988</synonym><synonym uniqueName="">Shewanella affinis</synonym><synonym uniqueName="">Shewanella affinis Ivanova et al. 2004</synonym><synonym uniqueName="">Shewanella colwelliana</synonym><synonym uniqueName="">Shewanella colwelliana (Weiner et al. 1988) Coyne et al. 1990</synonym><synonym uniqueName="strain LST-W &lt;type strain&gt;">strain LST-W</synonym></term><term externalId="NCBI-22"><synonym uniqueName="">"Pseudomonas putrefaciens" (Derby and Hammer) Long and Hammer 1941</synonym><synonym uniqueName="ATCC 8071 &lt;type strain&gt;">ATCC 8071</synonym><synonym uniqueName="">Alteromonas putrefaciens</synonym><synonym uniqueName="">Alteromonas putrefaciens (ex Derby and Hammer) Lee et al. 1981</synonym><synonym uniqueName="CCUG 13452 D &lt;type strain&gt;">CCUG 13452 D</synonym><synonym uniqueName="CFBP 3033 &lt;type strain&gt;">CFBP 3033</synonym><synonym uniqueName="CFBP 3034 &lt;type strain&gt;">CFBP 3034</synonym><synonym uniqueName="CIP 80.40 &lt;type strain&gt;">CIP 80.40</synonym><synonym uniqueName="DSM 6067 &lt;type strain&gt;">DSM 6067</synonym><synonym uniqueName="IFO 3908 &lt;type strain&gt;">IFO 3908</synonym><synonym uniqueName="JCM 20190 &lt;type strain&gt;">JCM 20190</synonym><synonym uniqueName="JCM 9294 &lt;type strain&gt;">JCM 9294</synonym><synonym uniqueName="LMG 2268 &lt;type strain&gt;">LMG 2268</synonym><synonym uniqueName="LMG:2268 &lt;type strain&gt;">LMG:2268</synonym><synonym uniqueName="NBRC 3908 &lt;type strain&gt;">NBRC 3908</synonym><synonym uniqueName="NCIB 10471 &lt;type strain&gt;">NCIB 10471</synonym><synonym uniqueName="NCIB:10471 &lt;type strain&gt;">NCIB:10471</synonym><synonym uniqueName="NCIMB 10471 &lt;type strain&gt;">NCIMB 10471</synonym><synonym uniqueName="NCTC 12960 &lt;type strain&gt;">NCTC 12960</synonym><synonym uniqueName="">Pseudomonas putrefaciens</synonym><synonym uniqueName="">Shewanella putrefaciens</synonym><synonym uniqueName="">Shewanella putrefaciens (Lee et al. 1981) MacDonell and Colwell 1986</synonym><synonym uniqueName="strain Hammer 95 &lt;type strain&gt;">strain Hammer 95</synonym></term><term externalId="NCBI-22"><synonym uniqueName="ATCC 33224 &lt;type strain&gt;">ATCC 33224</synonym><synonym uniqueName="">Alteromonas hanedai</synonym><synonym uniqueName="">Alteromonas hanedai Jensen et al. 1981</synonym><synonym uniqueName="CCUG 16097 &lt;type strain&gt;">CCUG 16097</synonym><synonym uniqueName="CIP 103207 &lt;type strain&gt;">CIP 103207</synonym><synonym uniqueName="DSM 6066 &lt;type strain&gt;">DSM 6066</synonym><synonym uniqueName="JCM 20706 &lt;type strain&gt;">JCM 20706</synonym><synonym uniqueName="LMG 19004 &lt;type strain&gt;">LMG 19004</synonym><synonym uniqueName="LMG:19004 &lt;type strain&gt;">LMG:19004</synonym><synonym uniqueName="NBRC 102223 &lt;type strain&gt;">NBRC 102223</synonym><synonym uniqueName="">Shewanella hanedai</synonym><synonym uniqueName="">Shewanella hanedai (Jensen et al. 1981) MacDonell and Colwell 1986</synonym><synonym uniqueName="strain 281 &lt;type strain&gt;">strain 281</synonym></term><term externalId="NCBI-49928"><synonym uniqueName="">halophilic eubacterium (NRCC 41227)</synonym><synonym uniqueName="">halophilic eubacterium NRCC 41227</synonym><synonym uniqueName="">halophilic eubacterium NRCC41227</synonym></term><term externalId="NCBI-49928"><synonym uniqueName="">halophilic eubacterium</synonym></term><term externalId="NCBI-28221"><synonym uniqueName="">Myxobacteria</synonym><synonym uniqueName="">Myxococcales</synonym><synonym uniqueName="">Myxococcales Tchan et al. 1948</synonym><synonym uniqueName="">The Myxobacteria</synonym><synonym uniqueName="">fruiting gliding bacteria</synonym></term><term externalId="NCBI-80811"><synonym uniqueName="">Myxococcaceae</synonym><synonym uniqueName="">Myxococcaceae Jahn et al. 1924 (Approved Lists 1980) emend. Lang et al. 2015</synonym></term><term externalId="NCBI-31"><synonym uniqueName="">Myxococcus</synonym><synonym uniqueName="">Myxococcus Thaxter 1892 emend. Lang and Stackebrandt 2009</synonym></term><term externalId="NCBI-32"><synonym uniqueName="">"Micrococcus fulvus" Cohn 1875</synonym><synonym uniqueName="ATCC 25199 &lt;type strain&gt;">ATCC 25199</synonym><synonym uniqueName="DSM 16525 &lt;type strain&gt;">DSM 16525</synonym><synonym uniqueName="">Micrococcus fulvus</synonym><synonym uniqueName="">Myxococcus fulvus</synonym><synonym uniqueName="">Myxococcus fulvus (Cohn 1875) Jahn 1911</synonym><synonym uniqueName="NBRC 100333 &lt;type strain&gt;">NBRC 100333</synonym><synonym uniqueName="NCIMB 13349 &lt;type strain&gt;">NCIMB 13349</synonym></term><term externalId="NCBI-32"><synonym uniqueName="ATCC 25232 &lt;type strain&gt;">ATCC 25232</synonym><synonym uniqueName="CCUG 2079 &lt;type strain&gt;">CCUG 2079</synonym><synonym uniqueName="CIP 107069 &lt;type strain&gt;">CIP 107069</synonym><synonym uniqueName="DSM 16526 &lt;type strain&gt;">DSM 16526</synonym><synonym uniqueName="IFO 13542 &lt;type strain&gt;">IFO 13542</synonym><synonym uniqueName="">Myxococcus xanthus</synonym><synonym uniqueName="">Myxococcus xanthus Beebe 1941</synonym><synonym uniqueName="">Myxococcus xanthus retron Mx162</synonym><synonym uniqueName="">Myxococcus xanthus retron Mx65</synonym><synonym uniqueName="NBRC 13542 &lt;type strain&gt;">NBRC 13542</synonym></term><term externalId="NCBI-32"><synonym uniqueName="">"Chondrococcus macrosporus" Krzemieniewska and Krzemieniewski 1926</synonym><synonym uniqueName="CIP 109128 &lt;type strain&gt;">CIP 109128</synonym><synonym uniqueName="">Chondrococcus macrosporus</synonym><synonym uniqueName="">Corallococcus macrosporus</synonym><synonym uniqueName="">Corallococcus macrosporus Reichenbach 2007</synonym><synonym uniqueName="DSM 14697 &lt;type strain&gt;">DSM 14697</synonym><synonym uniqueName="JCM 12621 &lt;type strain&gt;">JCM 12621</synonym><synonym uniqueName="">Myxococcus macrosporus</synonym><synonym uniqueName="">Myxococcus macrosporus (Krzemieniewska and Krzemieniewski 1926) Zahler and McCurdy 1974 (Approved Lists 1980)</synonym><synonym uniqueName="strain Cc m8 &lt;type strain&gt;">strain Cc m8</synonym></term><term externalId="NCBI-47"><synonym uniqueName="">"Angiococcus disciformis" (Thaxter 1904) Jahn 1924</synonym><synonym uniqueName="">"Cystobacter disciformis" (Thaxter 1904) Brockman and McCurdy 1989</synonym><synonym uniqueName="ATCC 33172 &lt;type strain&gt;">ATCC 33172</synonym><synonym uniqueName="">Angiococcus disciformis</synonym><synonym uniqueName="">Angiococcus disciformis (Thaxter 1904) Hook et al. 1980</synonym><synonym uniqueName="">Archangium disciforme</synonym><synonym uniqueName="">Archangium disciforme (Thaxter 1904) Lang et al. 2015</synonym><synonym uniqueName="">Cystobacter disciformis</synonym><synonym uniqueName="DSM 17051 &lt;type strain&gt;">DSM 17051</synonym><synonym uniqueName="DSM 52716 &lt;type strain&gt;">DSM 52716</synonym><synonym uniqueName="">Myxococcus disciformis</synonym><synonym uniqueName="">Myxococcus disciformis Thaxter 1904 (Approved Lists 1980)</synonym><synonym uniqueName="strain CMU-1 &lt;type strain&gt;">strain CMU-1</synonym></term><term externalId="NCBI-80811"><synonym uniqueName="">Archangiaceae</synonym><synonym uniqueName="">Archangiaceae Jahn et al. 1924 (Approved Lists 1980) emend. Lang et al. 2015</synonym><synonym uniqueName="">Cystobacteraceae</synonym><synonym uniqueName="">Cystobacteraceae McCurdy 1970 (Approved Lists 1980) emend. Awal et al. 2017</synonym></term><term externalId="NCBI-39"><synonym uniqueName="">Stigmatella</synonym><synonym uniqueName="">Stigmatella Berkeley and Curtis 1875</synonym></term><term externalId="NCBI-40"><synonym uniqueName="">"Chondromyces aurantiacus" (Berkeley and Curtis) Thaxter 1892</synonym><synonym uniqueName="ATCC 25190 &lt;type strain&gt;">ATCC 25190</synonym><synonym uniqueName="">Chondromyces aurantiacus</synonym><synonym uniqueName="DSM 17044 &lt;type strain&gt;">DSM 17044</synonym><synonym uniqueName="">Stigmatella aurantiaca</synonym><synonym uniqueName="">Stigmatella aurantiaca Berkeley and Curtis 1875</synonym></term></taxonomy></root>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment