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@docsteveharris
Created June 16, 2017 15:39
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example field spec with options for some of the classification levels
# # apply response after field specification allows two possibilities
# # apply: drop_entry - just replace field with NA
# # apply: drop_episode - drop entire episode
# # range checks for continuous data *must* use traffic light terms
# # - red
# # - amber
# # - green
# # also concept of nodata check which will drop episode if data is missing
# # e.g. for something crucial like date of birth (age)
# # nodata:
# # apply: drop_episode
# # set missingness yellow to -1 to prevent any data being dropped
# ===============================
# = drop episode filters to add =
# ===============================
# - [ ] TODO(2016-06-16): data/time icu admit
# - [ ] TODO(2016-06-16): data/time icu discharge
# - [ ] TODO(2016-06-16): icu mortality
# Maybe not drop these
# - [ ] TODO(2016-06-16): data/time hospital admit
# - [ ] TODO(2016-06-16): data/time hospital discharge
# - [ ] TODO(2016-06-16): hospital mortality
# =====================================
# = no data missingess for key fields =
# =====================================
# - [ ] NOTE(2016-11-30): AGE comes from the anonymised data
AGE:
age: age
dataItem: Age (via ccanonym)
NIHR_HIC_ICU_0033:
shortName: dob
dataItem: Date of birth
NIHR_HIC_ICU_0001:
shortName: pas_id
dataItem: PAS number
NIHR_HIC_ICU_0073:
shortName: nhs_id
dataItem: NHS number
# - [ ] NOTE(2016-07-17): these are automatically imported and will cause duplicate problems if re-imported
# NIHR_HIC_ICU_0002:
# shortName: site_id
# dataItem: ICNARC CMP number
# distribution: nominal
# nodata:
# apply: drop_episode
# NIHR_HIC_ICU_0005:
# shortName: episode_id
# dataItem: Critical care local identifier / ICNARC admission number
NIHR_HIC_ICU_0108:
shortName: hrate
dataItem: Heart rate
distribution: normal
decimal_places: 0
range:
labels:
red: (0, 300)
amber: (11, 170)
green: (60, 100)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
# apply: drop_episode
NIHR_HIC_ICU_0122:
shortName: lac_bg
dataItem: Lactate - ABG
distribution: skewed
decimal_places: 1
range:
labels:
red: (0, 30)
amber: (0.1, 20)
green: (0.4, 2.2)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 4
# lag: 4
# fun: median
# apply: drop_episode
NIHR_HIC_ICU_0093:
shortName: sex
dataItem: Sex
distribution: binary
category:
levels: # beware case-sensitive
M: male
F: female
NIHR_HIC_ICU_0097:
shortName: dead_icu
dataItem: Dead or alive on discharge
distribution: binary
category:
levels:
A: Alive
D: Dead
E: Alive - not discharged
apply: drop_entry
NIHR_HIC_ICU_0930:
shortName: ult_dead_icu
dataItem: Status at ultimate discharge from ICUHDU
distribution: binary
category:
levels:
A: Alive
D: Dead
E: Alive - not discharged
apply: drop_entry
NIHR_HIC_ICU_0112:
shortName: bp_sys_a
dataItem: Systolic Arterial blood pressure - Art BPSystolic Arterial blood pressure
distribution: normal
decimal_places: 0
range:
labels:
red: (0, 300)
amber: (50, 220)
green: (80, 120)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
NIHR_HIC_ICU_0113:
shortName: bp_sys_ni
dataItem: Systolic Arterial blood pressure - NBPSystolic Arterial blood pressure
distribution: normal
decimal_places: 0
range:
labels:
red: (0, 300)
amber: (50, 220)
green: (80, 120)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
NIHR_HIC_ICU_0114:
shortName: bp_dia_a
dataItem: Diastolic arterial blood pressure - Art BPDiastolic arterial blood pressure
distribution: normal
decimal_places: 0
range:
labels:
red: (0, 250)
amber: (20, 150)
green: (50, 80)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
NIHR_HIC_ICU_0115:
shortName: bp_dia_ni
dataItem: Diastolic arterial blood pressure - NBPDiastolic arterial blood pressure
distribution: normal
decimal_places: 0
range:
labels:
red: (0, 250)
amber: (20, 150)
green: (50, 80)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
NIHR_HIC_ICU_0110:
shortName: bp_m_a
dataItem: Mean arterial blood pressure - Art BPMean arterial blood pressure
distribution: normal
decimal_places: 0
range:
labels:
red: (0, 270)
amber: (30, 175)
green: (60, 95)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
NIHR_HIC_ICU_0111:
shortName: bp_m_ni
dataItem: Mean arterial blood pressure - NBPMean arterial blood pressure
distribution: normal
decimal_places: 0
range:
labels:
red: (0, 270)
amber: (30, 175)
green: (60, 95)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
NIHR_HIC_ICU_0398:
shortName: adm_type
dataItem: Admission type
distribution: nominal
category:
levels:
L: unplanned Local admission
U: Unplanned transfer in
P: Planned transfer in
S: planned local Surgical admission
M: planned local Medical admission
R: Repatriation
apply: drop_entry
NIHR_HIC_ICU_0058:
shortName: ethnic
dataItem: Ethnicity
distribution: nominal
category:
levels:
A: white British
B: white Irish
C: white any other
D: mixed white and black Caribbean
E: mixed white and black African
F: mixed white and Asian
G: mixed any other
H: Asian or Asian British - Indian
J: Asian or Asian British - Pakistani
K: Asian or Asian British - Bangladeshi
L: Asian or Asian British - any other
M: black or black British - Caribbean
N: black or black British - African
P: black or black British - any other
R: other ethnic group - Chinese
S: any other ethnic group
Z: not stated
apply: drop_entry
NIHR_HIC_ICU_0077:
shortName: loca_in_prior
dataItem: Prior location (in)
distribution: nominal
category:
levels:
W: Ward
B: oBstetric area
M: other interMediate care area
P: Paediatric/neonatal ICU/HCU
I: level 3 bed in adult ICU or ICU/HDU
H: level 2 bed in adult ICU or ICU/HDU
U: adUlt HCU
T: Theatre & recovery
E: accident & Emergency
R: Recovery only
G: imaGing department
S: Specialist treatment area
C: Clinic
N: Not in hospital
apply: drop_entry
NIHR_HIC_ICU_0068:
shortName: loca_in
dataItem: Location (in)
distribution: nominal
category:
levels:
W: Ward
B: oBstetric area
M: other interMediate care area
P: Paediatric/neonatal ICU/HCU
I: level 3 bed in adult ICU or ICU/HDU
H: level 2 bed in adult ICU or ICU/HDU
U: adUlt HCU
T: Theatre & recovery
E: accident & Emergency
R: Recovery only
G: imaGing department
S: Specialist treatment area
C: Clinic
N: Not in hospital
apply: drop_entry
NIHR_HIC_ICU_0399:
shortName: diag_admx1
dataItem: Primary reason for admission to your unit
distribution: nomimal
NIHR_HIC_ICU_0088:
shortName: diag_admx2
dataItem: Secondary reasons for admission to your unit
distribution: nominal
NIHR_HIC_ICU_0095:
shortName: dead_hosp
dataItem: Status at discharge from your hospital
distribution: binary
category:
levels:
A: Alive
D: Dead
E: Alive - not discharged
apply: drop_entry
NIHR_HIC_ICU_0098:
shortName: ult_dead_hosp
dataItem: Status at ultimate discharge from hospital
distribution: binary
category:
levels:
A: Alive
D: Dead
E: Alive - not discharged
apply: drop_entry
NIHR_HIC_ICU_0409:
shortName: apa_II_sc
dataItem: APACHE II Score
distribution: normal
decimal_places: 0
range:
labels:
red: (-1, 72)
apply: drop_entry
NIHR_HIC_ICU_0410:
shortName: apa_II-pr
dataItem: APACHE II Probability
distribution: normal
decimal_places: 0
range:
labels:
red: (-1, 101)
apply: drop_entry
NIHR_HIC_ICU_0470:
shortName: rx_norad
dataItem: Noradrenaline
distribution: normal
decimal_places: 2
range:
labels:
red: (-0.01, 3)
amber: (-0.01, 1)
apply: drop_entry
NIHR_HIC_ICU_0469:
shortName: rx_levos
dataItem: Levosimendan
distribution: normal
decimal_places: 2
range:
labels:
red: (-0.01, 0.2)
amber: (-0.01, 0.1)
apply: drop_entry
NIHR_HIC_ICU_0027:
shortName: ncepod
dataItem: classification of surgery
distribution: nominal
category:
levels:
M: Emergency
U: Urgent
S: Scheduled
L: eLective
apply: drop_entry
NIHR_HIC_ICU_0465:
shortName: rx_adre
dataItem: Adrenaline
distribution: normal
decimal_places: 2
range:
labels:
red: (-0.01, 3)
amber: (-0.01, 1)
apply: drop_entry
NIHR_HIC_ICU_0466:
shortName: rx_dobu
dataItem: Dobutamine
distribution: normal
decimal_places: 1
range:
labels:
red: (-0.01, 50)
amber: (-0.01, 25)
green: (-0.01, 15)
apply: drop_entry
NIHR_HIC_ICU_0467:
shortName: rx_dopa
dataItem: Dopamine
distribution: normal
decimal_places: 1
range:
labels:
red: (-0.01, 50)
amber: (-0.01, 25)
green: (-0.01, 5)
apply: drop_entry
NIHR_HIC_ICU_0564:
shortName: rx_dopex
dataItem: Dopexamine
distribution: normal
decimal_places: 2
range:
labels:
red: (-0.01, 2)
amber: (-0.01, 1)
apply: drop_entry
NIHR_HIC_ICU_0468:
shortName: rx_enox
dataItem: Enoximone
distribution: normal
decimal_places: 1
range:
labels:
red: (-0.01, 40)
amber: (-0.01, 20)
apply: drop_entry
NIHR_HIC_ICU_0252:
shortName: rx_milr
dataItem: Milrinone
distribution: normal
decimal_places: 3
range:
labels:
red: (-0.01, 1)
amber: (-0.01, 0.75)
apply: drop_entry
NIHR_HIC_ICU_0471:
shortName: rx_vasopr
dataItem: Vasopressin
distribution: normal
decimal_places: 2
range:
labels:
red: (-0.01, 0.07)
amber: (-0.01, 0.06)
green: (-0.01, 0.04)
apply: drop_entry
NIHR_HIC_ICU_0565:
shortName: rx_terlip
dataItem: Terlipressin
distribution: normal
decimal_places: 2
range:
labels:
red: (-0.01, 2)
amber: (-0.01, 1)
green: (-0.01, 0.25)
apply: drop_entry
NIHR_HIC_ICU_0462:
shortName: propofol
dataItem: Propofol
distribution: normal
decimal_places: 0
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0558:
shortName: ~
dataItem: Thiopentone / Thiopental
Classification4: Barbiturates
distribution: normal
decimal_places: 0
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0463:
shortName: ~
dataItem: Midazolam
distribution: normal
decimal_places: 0
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0559:
shortName: ~
dataItem: Clonidine
distribution: normal
decimal_places: 2
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0560:
shortName: Dexmed
dataItem: Dexmedetomidine
distribution: normal
decimal_places: 2
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0561:
shortName: Keta
dataItem: Ketamine
distribution: normal
decimal_places: 2
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0242:
shortName: fentanyl
dataItem: Fentanyl
distribution: normal
decimal_places: 0
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0563:
shortName: ~
dataItem: Morphine
distribution: normal
decimal_places: 1
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0464:
shortName: ~
dataItem: Remifentanil
distribution: normal
decimal_places: 1
missingness:
range_red: 24
range_yellow: 1
NIHR_HIC_ICU_0160:
shortName: RASS
dataItem: Sedation score (hourly)
distribution: ordinal
decimal_places: 0
range:
labels:
red: (-6, 5)
apply: drop_entry
NIHR_HIC_ICU_0184:
shortName: platelets
dataItem: Platelets
distribution: skewed
decimal_places: 0
range:
labels:
red: (-1,5000)
amber: (0,1000)
green: (150, 400)
apply: drop_entry
NIHR_HIC_ICU_0174:
shortName: bilirubin
dataItem: Bilirubin
distribution: skewed
decimal_places: 0
range:
labels:
red: (1,1000)
amber: (5,500)
green: (3, 20)
apply: drop_entry
NIHR_HIC_ICU_0132:
shortName: pao2
dataItem: PaO2 - ABG
distribution: normal
decimal_places: 2
Units: kPa
range:
labels:
red: (0,100)
apply: drop_entry
# NIHR_HIC_ICU_0126:
# shortName: trachy
# dataItem: Airway
# distribution: nominal
# levels:
# comment:
# arthur: |
# # levels:
# # Endotracheal tube (oral/nasal)
# # Tracheostomy
# # None
# I am not sure about the name of those levels
# Endotracheal tube (oral/nasal)
# Tracheostomy
# None
NIHR_HIC_ICU_0549:
shortName: rrate_spont
dataItem: Spontaneous Respiratory Rate
distribution: normal
decimal_places: 0
range:
labels:
red: (-1, 121)
amber: (0, 100)
green: (12, 20)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
# apply: drop_episode
NIHR_HIC_ICU_0145:
shortName: Total_Resp_Rate_Monit
dataItem: Total respiratory rate (monitor)
distribution: normal
decimal_places: 0
range:
labels:
red: (-1, 121)
amber: (0, 100)
green: (12, 20)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
# apply: drop_episode
# NIHR_HIC_ICU_0147:
# shortName: Mandat_Resp_Rate
# dataItem: Mandatory Respiratory Rate
# distribution: normal
# decimal_places: 0
# missingness:
# range_red: 24
# range_yellow: 1
NIHR_HIC_ICU_0146:
shortName: Total_Resp_Rate_Ventil
dataItem: Total respiratory rate (ventilator)
distribution: normal
decimal_places: 0
range:
labels:
red: (-1, 121)
amber: (0, 100)
green: (12, 20)
apply: drop_entry
# missingness:
# labels:
# yellow: 24
# accept_2d:
# yellow: 70
# impute_2d:
# lead: 3
# lag: 3
# fun: median
# apply: drop_episode
NIHR_HIC_ICU_0144:
shortName: ventilated
dataItem: Invasive or non-invasive (ventilation)
distribution: binary
category:
levels:
1: invasive ventilation
2: non-invasive ventilation
apply: drop_entry
NIHR_HIC_ICU_0129:
shortName: spo2
dataItem: SpO2
distribution: normal
decimal_places: 0
range:
labels:
red: (-1, 101)
amber: (70,100)
green: (92, 100)
apply: drop_entry
# NIHR_HIC_ICU_0550:
# shortName: ~
# dataItem: Tidal volume
# distribution: normal
# decimal_places: 0
# missingness:
# range_red: 24
# range_yellow: 1
NIHR_HIC_ICU_0150:
shortName: fiO2
dataItem: Inspired fraction of oxygen
distribution: normal
decimal_places: 2
range:
labels:
red: (20,101)
apply: drop_entry
NIHR_HIC_ICU_0166:
shortName: creatinine
dataItem: Creatinine
distribution: normal
decimal_places: 0
range:
labels:
red: (-1, 5000)
amber: (20, 1000)
green: (50, 120)
apply: drop_entry
NIHR_HIC_ICU_0162:
shortName: urine1h
dataItem: Urine output (hourly)
distribution: normal
decimal_places: 0
range:
labels:
red: (-1, 2000)
amber: (-1, 1000)
apply: drop_entry
# missingness:
# range_red: 24
# range_yellow: 6
NIHR_HIC_ICU_0161:
shortName: rrt
dataItem: Renal replacement mode
distribution: nominal
category:
levels:
1: CVVHF
2: CVVHDF
apply: drop_entry
NIHR_HIC_ICU_0156:
shortName: gcs
dataItem: GCS - total
distribution: ordinal
decimal_places: 0
range:
labels:
red: (2, 16)
apply: drop_entry
# missingness:
# range_yellow: 24
NIHR_HIC_ICU_0913:
shortName: pf_ratio
distribution: normal
decimal_places: 1
dataItem: PaO2/FiO2 ratio
range:
labels:
red: (0,100)
apply: drop_entry
# NIHR_HIC_ICU_0187:
# shortName: micro_bug
# distribution: nominal
# dataItem: Organism
# NIHR_HIC_ICU_0188:
# shortName: micro_sens
# distribution: nominal
# dataItem: Sensitivity
# # Start of the antimicrobials, leaving in classification for now
# # Will be useful in assigning class
NIHR_HIC_ICU_0414:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Aminoglycosides
Classification4: ~
dataItem: Amikacin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0437:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Aminoglycosides
Classification4: ~
dataItem: Gentamicin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0444:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Aminoglycosides
Classification4: ~
dataItem: Neomycin
Units: mg
sepsis3_abx: FALSE
NIHR_HIC_ICU_0459:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Aminoglycosides
Classification4: ~
dataItem: Tobramycin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0447:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Anti_protozoal
Classification4: ~
dataItem: Pentamidine
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0434:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Anti_tuberculous
Classification4: ~
dataItem: Ethambutal HCL
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0438:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Anti_tuberculous
Classification4: ~
dataItem: Isoniazid
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0450:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Anti_tuberculous
Classification4: ~
dataItem: Pyrazinamide
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0452:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Anti_tuberculous
Classification4: ~
dataItem: Rifampacin
Units: tab
sepsis3_abx: TRUE
NIHR_HIC_ICU_0453:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Anti_tuberculous
Classification4: ~
dataItem: Rifater
Units: tab
sepsis3_abx: TRUE
NIHR_HIC_ICU_0454:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Anti_tuberculous
Classification4: ~
dataItem: Rifinah
Units: tab
sepsis3_abx: TRUE
NIHR_HIC_ICU_0432:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Carbapenems
Classification4: ~
dataItem: Ertapenem
Units: g
sepsis3_abx: TRUE
NIHR_HIC_ICU_0441:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Carbapenems
Classification4: ~
dataItem: Meropenem
Units: g
sepsis3_abx: TRUE
range:
labels:
red: (0, 2001)
amber: (0, 2.1)
apply: drop_entry
NIHR_HIC_ICU_0418:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Cephalosporins
Classification4: ~
dataItem: Cefotaxime
Units: g
sepsis3_abx: TRUE
NIHR_HIC_ICU_0419:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Cephalosporins
Classification4: ~
dataItem: Ceftazidime
Units: g
sepsis3_abx: TRUE
NIHR_HIC_ICU_0420:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Cephalosporins
Classification4: ~
dataItem: Ceftriaxone
Units: g
sepsis3_abx: TRUE
NIHR_HIC_ICU_0421:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Cephalosporins
Classification4: ~
dataItem: Cefuroxime
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0422:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Chloramphenicol
Classification4: ~
dataItem: Chloramphenicol
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0436:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Fusidanes
Classification4: ~
dataItem: Fuscidic acid
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0456:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Fusidanes
Classification4: ~
dataItem: Sodium Fusidate
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0457:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Glycopeptides
Classification4: ~
dataItem: Teicoplanin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0461:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Glycopeptides
Classification4: ~
dataItem: Vancomycin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0425:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Lincosamides
Classification4: ~
dataItem: Clindamycin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0416:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Macrolides
Classification4: ~
dataItem: Azithromycin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0424:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Macrolides
Classification4: ~
dataItem: Clarithromycin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0433:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Macrolides
Classification4: ~
dataItem: Erythromycin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0445:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Nitrofurans
Classification4: ~
dataItem: Nitrofurantion
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0442:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Nitroimidazole
Classification4: ~
dataItem: Metronidazole
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0440:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Oxazolidinone
Classification4: ~
dataItem: Linezolid
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0415:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Penicillins
Classification4: ~
dataItem: Amoxicillin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0417:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Penicillins
Classification4: ~
dataItem: Benzylpenicillin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0426:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Penicillins
Classification4: ~
dataItem: Co-Amoxiclav
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0435:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Penicillins
Classification4: ~
dataItem: Flucloxacillin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0448:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Penicillins
Classification4: ~
dataItem: Phenoxymethylpenicillin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0449:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Penicillins
Classification4: ~
dataItem: Piperacillin/Tazobactam
Units: g
sepsis3_abx: TRUE
NIHR_HIC_ICU_0427:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Polymyxins
Classification4: ~
dataItem: Colistin
Units: megaunits
sepsis3_abx: TRUE
NIHR_HIC_ICU_0423:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Quinolones
Classification4: ~
dataItem: Ciprofloxacin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0439:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Quinolones
Classification4: ~
dataItem: Levofloxacin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0443:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Quinolones
Classification4: ~
dataItem: Moxifloxacin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0446:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Quinolones
Classification4: ~
dataItem: Ofloxacin
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0428:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Sulfonamides_trimethoprim
Classification4: ~
dataItem: Co-Trimoxazole
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0460:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Sulfonamides_trimethoprim
Classification4: ~
dataItem: Trimethoprim
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0429:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Tetracyclines
Classification4: ~
dataItem: Demeclocycline HCL
Units: mg
sepsis3_abx: FALSE
NIHR_HIC_ICU_0430:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Tetracyclines
Classification4: ~
dataItem: Doxycycline
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0458:
shortName: ~
Classification1: Drugs
Classification2: Anti_microbials
Classification3: Tetracyclines
Classification4: ~
dataItem: Tigecycline
Units: mg
sepsis3_abx: TRUE
NIHR_HIC_ICU_0411:
shortName: dt_icu_admit
dataItem: Date & Time of admission to your unit
NIHR_HIC_ICU_0412:
shortName: dt_icu_dc
dataItem: Date & Time of discharge from your unit
NIHR_HIC_ICU_0032:
shortName: dt_hosp_admit
dataItem: Date of admission to your hospital
NIHR_HIC_ICU_0406:
shortName: dt_hosp_dc
dataItem: Date of discharge from your hospital
NIHR_HIC_ICU_0024:
shortName: pmhx_chemo
dataItem: Chemotherapy (within the last 6months) steroids alone excluded
NIHR_HIC_ICU_0080:
shortName: pmhx_dxt
dataItem: Radiotherapy
NIHR_HIC_ICU_0029:
shortName: pmhx_immuncomp
dataItem: Congenital immunohumoral or cellular immune deficiency state
NIHR_HIC_ICU_0010:
shortName: pmhx_leuk_acute
dataItem: Acute myeloid/lymphocytic leukaemia or myeloma
NIHR_HIC_ICU_0025:
shortName: pmhx_leuk_chronic
dataItem: Chronic myelogenous /lymphocytic leukaemia
NIHR_HIC_ICU_0070:
shortName: pmhx_lymphoma
dataItem: Lymphoma
NIHR_HIC_ICU_0071:
shortName: pmhx_metastatic
dataItem: Metastatic disease
NIHR_HIC_ICU_0026:
shortName: pmhx_crrt
dataItem: Chronic renal replacement therapy
NIHR_HIC_ICU_0016:
shortName: pmhx_cirrhosis
dataItem: Biopsy proven cirrhosis
NIHR_HIC_ICU_0060:
shortName: pmhx_alf
dataItem: Heaptic encephalopathy
NIHR_HIC_ICU_0075:
shortName: pmhx_portal_htn
dataItem: Portal hypertension
NIHR_HIC_ICU_0062:
shortName: pmhx_hiv
dataItem: HIV/AIDS
NIHR_HIC_ICU_0063:
shortName: pmhx_home_vent
dataItem: Home ventilation
NIHR_HIC_ICU_0092:
shortName: pmhx_severe_rs
dataItem: Severe respiratory disease
NIHR_HIC_ICU_0099:
shortName: pmhx_steroids
dataItem: Steroid treatment
NIHR_HIC_ICU_0107:
shortName: pmhx_severe_cvs
dataItem: Very severe cardiovascular disease
NIHR_HIC_ICU_0074:
shortName: pmhx_other
dataItem: Other condition in past medical history
NIHR_HIC_ICU_0055:
shortName: pmhx_depend
dataItem: Dependency prior to admission
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