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4 4 M
1 1 1
1 2 2
3 2 4
3 4 5
0 0 0

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require 'gollum-lib'    
require 'benchmark'

def do_benchmark(*args)
    Benchmark.bm(10) do |x|
        x.report { 5.times do
            send(*args)
        end }
    end
end

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require 'open3'
require 'docker'
require 'stringio'

content = <<EOF

```{r first_r_chunk}
vec <- c(1, 2, 3)
cat(readLines("/etc/passwd"), sep="\n")
print(vec)

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#!/usr/bin/env ruby
#coding:utf-8
require 'optparse'
require 'pathname'
require 'rubygems'

REPO = ARGV[0] || Dir.pwd

wiki_options = {}

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query = '+"XYZ" foo -"bar" "hobbit fan"'

search_terms = []
absent       = []
present      = []

query.scan(/([-+])?"([^"]+)"|(\S+)/) do
  term     = Regexp.last_match[2] || Regexp.last_match[3]
  term     = Regexp.escape(term)

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    # Loads sub pages. Sub page names (footers, headers, sidebars) are prefixed with
    # an underscore to distinguish them from other Pages. If there is not one within
    # the current directory, starts walking up the directory tree to try and find one
    # within parent directories.
    def find_sub_pages(subpagenames = SUBPAGENAMES, map = nil)
      puts "FINDING SUB PAGES"
      subpagenames.each{|subpagename| instance_variable_set("@#{subpagename}", nil)}
      return nil if self.filename =~ /^_/ || ! self.version

      valid_names = %r{^_#{subpagenames.map(&:capitalize).join("|")}}

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get '/'
get '/*'
get %r{/(.+?)/([0-9a-f]{40})} # Specific version of a page or file

namespace '/gollum' do
  get '/last-commit-info'
  get '/emoji/:name'
  get '/data/*' # Maybe rename to 'raw'?
  get '/edit/*'
  get '/history/*'

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# Parse elements from the Elements Reference into a ruby array (to construct a `Sanitize` gem hash for `gollum`):
# https://developer.mozilla.org/en-US/docs/Web/MathML/Element
# See https://github.com/gollum/gollum-lib/pull/266
# Step 1: copy the *source* of https://developer.mozilla.org/en-US/docs/Web/MathML/Element (hit the 'Edit' button), at least of the part of the page containing the alphabetical element list.
# Step 2: save this as `mathml_elements.txt`
# Step 3:
grep MathMLElement mathml_elements.txt | awk -F'"' '{print $2}' > mathml_elements
# Step 4:
for line in `cat mathml_elements`; do echo "'$line',"; done
# Step 5 copy/paste result into ruby array (be sure to remove the comma after the last element):

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# This file is used by Rack-based servers to start the application.
require 'sinatra'
require ::File.expand_path('../config/environment',  __FILE__)

JAVA_FIRST_RUN   = java.lang.System.getProperty('setup_db')

map '/' do
  if JAVA_FIRST_RUN
    run RepotagConfig
  else

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<p><a href="Home">&raquo; JRuby Project Wiki Home Page</a>
<h1>Embedding JRuby</h1>
Using Java from Ruby is JRuby's best-known feature---but you can also go in the other direction, and use Ruby from Java.  There are several different ways to do this. You can execute entire Ruby scripts, call individual Ruby methods, or even implement a Java interface in Ruby (thus allowing you to treat Ruby objects like Java ones).  We refer to all these techniques generically as "embedding."  This section will explain how to embed JRuby in your Java project.
</p>
<p><table id="toc" class="toc" summary="Contents"><tr><td><div id="toctitle"><h2>Table of Contents</h2></div><ul></li><li><a href="<a class="tweet-url hashtag" href="https://twitter.com/#!/search?q=%23Red_Bridge_JRuby_Embed" rel="nofollow" title="#Red_Bridge_JRuby_Embed">#Red_Bridge_JRuby_Embed</a>">Red Bridge (JRuby Embed)</a><ul><li><a href="<a class="tweet-url hashtag" href="https://twitter.com/#!/search?q=%23Features_of_Red_Bridge" rel="nofollow" title="#Feature