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Last active June 30, 2017 12:26
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VCF tools
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gemini.md

From a conversation with roryk about gemini and extasy on 2017-02-28

gemini does 2 things: 1) gather data from a bunch of sources to make a VCF file; and, 2) let's you query over that VCF.

The two things are separable.

So if we have a bunch of annotations, then if they are in a VCF file we can add them to Gemini's VCF using cvf2anno (which is scriptable in lua, yay!).

Can then make a database using vcf2db.

However...

eXtasy is not like that. It takes a VCF file and outputs a CSV file. Gemini is not really a thing to deal with that.

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