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dwaggott/install_openssl.log

Created August 4, 2016 20:24
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install_openssl.log
[1] "trying URL 'http://probability.ca/cran/src/contrib/openssl_0.9.4.tar.gz'"
[2] "Content type 'application/x-gzip' length 1165388 bytes (1.1 Mb)"
[3] "opened URL"
[4] "=================================================="
[5] "downloaded 1.1 Mb"
[6] ""
[7] "* installing *source* package ‘openssl’ ..."
[8] "** package ‘openssl’ successfully unpacked and MD5 sums checked"
[9] "Found pkg-config cflags and libs!"
[10] "Using PKG_CFLAGS=-I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include"
[11] "Using PKG_LIBS=-L/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/lib -lssl -lcrypto"
[12] "** libs"
[13] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o"
[14] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o"
[15] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o"
[16] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o"
[17] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o"
[18] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o"
[19] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c error.c -o error.o"
[20] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o"
[21] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c info.c -o info.o"
[22] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o"
[23] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o"
[24] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o"
[25] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o"
[26] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c read.c -o read.o"
[27] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o"
[28] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o"
[29] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o"
[30] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o"
[31] "gcc -std=gnu99 -I/home/dwaggott/apps/R/R-3.1.2/include -DNDEBUG -I/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/include -I/usr/local/include -fpic -g -O2 -c write.c -o write.o"
[32] "gcc -std=gnu99 -shared -L/usr/local/lib64 -o openssl.so aes.o base64.o bignum.o cert.o diffie.o envelope.o error.o hash.o info.o keygen.o onload.o openssh.o rand.o read.o rsa.o signing.o ssl.o stream.o write.o -L/home/dwaggott/.linuxbrew/Cellar/openssl/1.0.2d_1/lib -lssl -lcrypto"
[33] "installing to /share/PI/euan/apps/R/R-3.1.2/library/openssl/libs"
[34] "** R"
[35] "** inst"
[36] "** preparing package for lazy loading"
[37] "** help"
[38] "*** installing help indices"
[39] "** building package indices"
[40] "** installing vignettes"
[41] "** testing if installed package can be loaded"
[42] "Error in dyn.load(file, DLLpath = DLLpath, ...) : "
[43] " unable to load shared object '/share/PI/euan/apps/R/R-3.1.2/library/openssl/libs/openssl.so':"
[44] " libssl.so.1.0.0: cannot open shared object file: No such file or directory"
[45] "Error: loading failed"
[46] "Execution halted"
[47] "ERROR: loading failed"
[48] "* removing ‘/share/PI/euan/apps/R/R-3.1.2/library/openssl’"
[49] ""
[50] "The downloaded source packages are in"
[51] "\t‘/state/partition2/local-scratch/dwaggott/9239691/RtmpFVRWNI/downloaded_packages’"
[52] "Warning message:"
[53] "In install.packages(\"openssl\", repos = \"http://probability.ca/cran\") :"
[54] " installation of package ‘openssl’ had non-zero exit status"
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