Last active
March 10, 2021 09:54
-
-
Save dyens/bc51a5556da56f237a9eb35c2f39aa98 to your computer and use it in GitHub Desktop.
Ambra. Get modalities in study
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
from ambra_sdk.api import Api | |
# Init api | |
api = Api.with_creds( | |
url=url, | |
username=username, | |
password=password, | |
client_name=my_client_name, | |
) | |
# Get some study | |
study = api.Study.list().first() | |
############################################## | |
# Get modalities using Storage.Study.schema: # | |
############################################## | |
study_schema = api.Storage.Study.schema( | |
engine_fqdn=study.engine_fqdn, | |
namespace=study.storage_namespace, | |
study_uid=study.study_uid, | |
) | |
for series in study_schema['series']: | |
print(series['modality']) | |
############################################ | |
# Get modalities using Storage.Study.json: # | |
############################################ | |
# Get metadata for all images in study | |
study_json = api.Storage.Study.json( | |
engine_fqdn=study.engine_fqdn, | |
namespace=study.storage_namespace, | |
study_uid=study.study_uid, | |
) | |
# Get all tags with name == Modality | |
# and print modality value | |
for image_json in study_json: | |
modality_tag = image_json.tag_by_name('Modality') | |
print(modality_tag.value) | |
# Actually study_json is json object. | |
# You can handle it however you like. | |
# But in this case using tag_by_name function | |
# makes everything a little more convenient. | |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment