Erik Garrison ekg

## cigar_summarize.py
#!/usr/bin/python

import sys;

import pysam

bamFile    = sys.argv[1];

bamFP = pysam.Samfile(bamFile, "rb");

## README.md

      
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                ekg
                / README.md
            
            
              Created
              June 13, 2018 09:37
                — forked from lvm/README.md
            
              
                [WIP] hackish emacs mode for FoxDot
              
          
    Installation


put foxdot-cli.py in the same directory as the FoxDot installaton (in case you're using virtualenv, otherwise comment from lines 5 to 7)
copy foxdot-mode.el to ~/.emacs.d/lisp
add (defvar foxdot-cli-path "/path/to/foxdot-cli/") in your ~/.emacs file
in Emacs M-x load-library and complete with foxdot-mode
Type C-c C-f or M-x foxdot-start to start
Type C-c C-e or M-x foxdot-execute to evaluate a line or a block of code


## keybase.md

      
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                ekg
                / keybase.md
            
            
              Created
              December 13, 2017 11:54
            
              
                keybase.md
              
          
    Keybase proof

I hereby claim:

I am ekg on github.
I am ekg (https://keybase.io/ekg) on keybase.
I have a public key ASBqVDBiA6DmXf7cj1k6CHy4DTYQnbAO-C4vZJcFZFwRlAo

To claim this, I am signing this object:
	#!/usr/bin/python

	import sys;

	import pysam

	bamFile = sys.argv[1];

	bamFP = pysam.Samfile(bamFile, "rb");