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Created April 28, 2016 20:33
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learning_resources.md

Resources for learning

Linux / Command Line

  • Command Line Bootcamp - A great interactive tutorial for learning the basics of the command line

  • Art of the Command Line - Not interactive, but more exhaustive than the bootcamp.

  • explainshell - Give it a shell command, and it'll tell you what all the parts mean. Never wonder what cat ./in | cut -f 2 | sort | uniq -c | sort -n -k1 | sed -e 's/^[ \t]*//' > ./out means again!

Python

  • The Rosalind Project - A set of challenges designed to teach python for bioinformatics. The Python Village and Bionformatics Armory are most relevant.

R

  • R for data science - An ebook on R with a focus on plotting and and dealing with flat data files. It is written by the creator of ggplot and dplyr, Hadley Wickham.
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