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Mark Johnson elucify

  • National Center for Biotechnology Information
  • Bethesda MD
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@elucify
elucify / GTR-README.md
Last active Aug 29, 2015
Suggested .md for GTR
View GTR-README.md

Genetic Testing Registry

This subdirectory of GTR's ftp site contains summary reports about labs that register tests in the NIH Genetic Testing Registry (GTR).

GTR Home - Browse the directory

--

See Disclaimer and Data Use Policy Below

@elucify
elucify / ChromeConsole.txt
Created Aug 22, 2014
Koding Terminal Chrome Console
View ChromeConsole.txt
(node) warning: possible EventEmitter memory leak detected. 11 listeners added. Use emitter.setMaxListeners() to increase limit. kite.js:1984
EventEmitter.addListener kite.js:1984
EventEmitter.once kite.js:2016
module.exports.Kite.ready kite.js:3680
(anonymous function) kite.js:3376
tryCatch2 bluebird.js:4991
Promise._resolveFromResolver bluebird.js:2246
Promise bluebird.js:1726
module.exports.Kite.ready kite.js:3374
(anonymous function) kite.js:3492
View gist:7f5a60569d950985fa72
Hello!
After series of experiments with ftp clients tuning for both uploading
and downloading with NCBI's ftp server we got to the conclusion that the
configuration of ftp client seriously affects the speed you get.
We recommend to increase the buffer size to 32MB, it helps for both
uploads and downloads.
View sauce-wtf.py
from selenium import webdriver
from random import random
import contextlib
import sys
if len(sys.argv) != 4:
print "Usage: python sauce-wtf.py <iphone|firefox|firefox.local> username sauce-access-key"
sys.exit(1)
@elucify
elucify / CLUUC New Neighbors Refugees Donation Kits
Last active Nov 17, 2016
List of items for kits for donations to our new neighbors from around the world.
View CLUUC New Neighbors Refugees Donation Kits
## Cleaning kit ($14-16)
* Dish soap
* kitchen cleaner
* bathroom cleaner
* sponges
## Toiletries kit (~$25)
* 2 adult toothbrushes
* toothpaste
View Bee-related recipes for Mark
@elucify
elucify / README.md
Last active Apr 17, 2018
ClinVar sample README.md
View README.md

ClinVar

This directory contains:

  • ClinVar (http://www.ncbi.nlm.nih.gov/clinvar/) dataset reports, and ClinVar development documents
  • documents related to the NCBI collaboration with ClinGen (http://www.clinicalgenome.org/)
  • ftp://ftp.ncbi.nih.gov/pub/clinvar/ClinGen/ExpertPanelRequestForm.docx - how to apply for expert panel status
  • data common to ClinVar and GTR
  • ftp://ftp.ncbi.nlm.nih.gov/pub/GTR/standard_terms - terminology used by both GTR and ClinVar.
@elucify
elucify / upload_ssh_key.sh
Last active Mar 16, 2019
Upload ssh key to TeamCity server; works for version 2018.1.1 (build 58406).
View upload_ssh_key.sh
#!/bin/bash
#
# Upload an SSH private key to a TeamCity project
# See https://youtrack.jetbrains.com/issue/TW-42311
# License: Public domain. No warranty expressed or implied. Use at own risk.
#
# Environment
#
# Must set environment variable TEAMCITY_SERVER_URL to https://<teamcity-hostname>. That
@elucify
elucify / gist:c7ccfee9f13b42f11f81
Created Jan 23, 2015
BASH: set variables for ANSI text color escape sequences
View gist:c7ccfee9f13b42f11f81
RESTORE=$(echo -en '\033[0m')
RED=$(echo -en '\033[00;31m')
GREEN=$(echo -en '\033[00;32m')
YELLOW=$(echo -en '\033[00;33m')
BLUE=$(echo -en '\033[00;34m')
MAGENTA=$(echo -en '\033[00;35m')
PURPLE=$(echo -en '\033[00;35m')
CYAN=$(echo -en '\033[00;36m')
LIGHTGRAY=$(echo -en '\033[00;37m')
LRED=$(echo -en '\033[01;31m')
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