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Created June 17, 2024 15:48
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error log file from CI run PR_2657
Raw
enkfgdaseupd.log
Begin eupd.sh at Mon Jun 17 15:41:20 UTC 2024
+ eupd.sh[7]: . /work2/noaa/stmp/CI/HERCULES/2657/gfs/ush/load_fv3gfs_modules.sh
++ load_fv3gfs_modules.sh[4]: [[ NO == \N\O ]]
++ load_fv3gfs_modules.sh[5]: echo 'Loading modules quietly...'
Loading modules quietly...
++ load_fv3gfs_modules.sh[6]: set +x
Running "module reset". Resetting modules to system default. The following $MODULEPATH directories have been removed: None
Currently Loaded Modules:
1) contrib/0.1 41) grib-util/1.3.0
2) intel-oneapi-compilers/2023.1.0 42) g2tmpl/1.10.2
3) stack-intel/2021.9.0 43) gsi-ncdiag/1.1.2
4) intel-oneapi-mpi/2021.9.0 44) crtm-fix/2.4.0.1_emc
5) stack-intel-oneapi-mpi/2021.9.0 45) git-lfs/3.1.2
6) intel-oneapi-mkl/2023.1.0 46) crtm/2.4.0.1
7) zlib/1.2.13 47) openblas/0.3.24
8) pigz/2.7 48) py-setuptools/63.4.3
9) zstd/1.5.2 49) py-numpy/1.23.4
10) tar/1.34 50) bufr/11.7.0
11) gettext/0.21.1 51) gmake/4.2.1
12) libxcrypt/4.4.35 52) wgrib2/2.0.8
13) sqlite/3.43.2 53) py-f90nml/1.4.3
14) util-linux-uuid/2.38.1 54) py-cftime/1.0.3.4
15) python/3.11.6 55) py-netcdf4/1.5.8
16) libjpeg/2.1.0 56) libyaml/0.2.5
17) jasper/2.0.32 57) py-pyyaml/6.0
18) libpng/1.6.37 58) py-markupsafe/2.1.3
19) openjpeg/2.3.1 59) py-jinja2/3.1.2
20) eccodes/2.32.0 60) py-bottleneck/1.3.7
21) fftw/3.3.10 61) py-numexpr/2.8.4
22) nghttp2/1.57.0 62) py-et-xmlfile/1.0.1
23) curl/8.4.0 63) py-openpyxl/3.1.2
24) proj/9.2.1 64) py-pytz/2023.3
25) udunits/2.2.28 65) py-pyxlsb/1.0.10
26) cdo/2.2.0 66) py-xlrd/2.0.1
27) hdf5/1.14.0 67) py-xlsxwriter/3.1.7
28) snappy/1.1.10 68) py-xlwt/1.3.0
29) c-blosc/1.21.5 69) py-pandas/1.5.3
30) netcdf-c/4.9.2 70) py-six/1.16.0
31) netcdf-fortran/4.6.1 71) py-python-dateutil/2.8.2
32) antlr/2.7.7 72) g2c/1.6.4
33) gsl/2.7.1 73) netcdf-cxx4/4.3.1
34) nco/5.0.6 74) met/9.1.3
35) bacio/2.4.1 75) metplus/3.1.1
36) w3emc/2.10.0 76) py-packaging/23.1
37) prod_util/2.1.1 77) py-xarray/2023.7.0
38) g2/3.4.5 78) prepobs/1.0.1
39) sp/2.5.0 79) fit2obs/1.1.1
40) ip/4.3.0 80) module_base.hercules
+ eupd.sh[8]: status=0
+ eupd.sh[9]: [[ 0 -ne 0 ]]
+ eupd.sh[11]: export job=eupd
+ eupd.sh[11]: job=eupd
+ eupd.sh[12]: export jobid=eupd.118260
+ eupd.sh[12]: jobid=eupd.118260
+ eupd.sh[16]: /work2/noaa/stmp/CI/HERCULES/2657/gfs/jobs/JGDAS_ENKF_UPDATE
Begin JGDAS_ENKF_UPDATE at Mon Jun 17 15:41:22 UTC 2024
+ JGDAS_ENKF_UPDATE[4]: source /work2/noaa/stmp/CI/HERCULES/2657/gfs/ush/jjob_header.sh -e eupd -c 'base anal eupd'
++ jjob_header.sh[44]: OPTIND=1
++ jjob_header.sh[45]: getopts c:e: option
++ jjob_header.sh[46]: case "${option}" in
++ jjob_header.sh[48]: env_job=eupd
++ jjob_header.sh[45]: getopts c:e: option
++ jjob_header.sh[46]: case "${option}" in
++ jjob_header.sh[47]: read -ra configs
++ jjob_header.sh[45]: getopts c:e: option
++ jjob_header.sh[59]: shift 4
++ jjob_header.sh[61]: [[ -z eupd ]]
++ jjob_header.sh[69]: export DATA=/work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260
++ jjob_header.sh[69]: DATA=/work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260
++ jjob_header.sh[70]: [[ YES == \Y\E\S ]]
++ jjob_header.sh[71]: rm -rf /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260
++ jjob_header.sh[73]: mkdir -p /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260
++ jjob_header.sh[74]: cd /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260
++ jjob_header.sh[80]: export cycle=t06z
++ jjob_header.sh[80]: cycle=t06z
++ jjob_header.sh[81]: setpdy.sh
sed: can't read /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/date/t06z: No such file or directory
completed cleanly
completed cleanly
Source PDY script to export PDYm7, ..., PDY, ..., PDYp7 variables.
++ jjob_header.sh[82]: source ./PDY
+++ PDY[1]: export PDYm7=20211214
+++ PDY[1]: PDYm7=20211214
+++ PDY[2]: export PDYm6=20211215
+++ PDY[2]: PDYm6=20211215
+++ PDY[3]: export PDYm5=20211216
+++ PDY[3]: PDYm5=20211216
+++ PDY[4]: export PDYm4=20211217
+++ PDY[4]: PDYm4=20211217
+++ PDY[5]: export PDYm3=20211218
+++ PDY[5]: PDYm3=20211218
+++ PDY[6]: export PDYm2=20211219
+++ PDY[6]: PDYm2=20211219
+++ PDY[7]: export PDYm1=20211220
+++ PDY[7]: PDYm1=20211220
+++ PDY[8]: export PDY=20211221
+++ PDY[8]: PDY=20211221
+++ PDY[9]: export PDYp1=20211222
+++ PDY[9]: PDYp1=20211222
+++ PDY[10]: export PDYp2=20211223
+++ PDY[10]: PDYp2=20211223
+++ PDY[11]: export PDYp3=20211224
+++ PDY[11]: PDYp3=20211224
+++ PDY[12]: export PDYp4=20211225
+++ PDY[12]: PDYp4=20211225
+++ PDY[13]: export PDYp5=20211226
+++ PDY[13]: PDYp5=20211226
+++ PDY[14]: export PDYp6=20211227
+++ PDY[14]: PDYp6=20211227
+++ PDY[15]: export PDYp7=20211228
+++ PDY[15]: PDYp7=20211228
++ jjob_header.sh[88]: export pid=118547
++ jjob_header.sh[88]: pid=118547
++ jjob_header.sh[89]: export pgmout=OUTPUT.118547
++ jjob_header.sh[89]: pgmout=OUTPUT.118547
++ jjob_header.sh[90]: export pgmerr=errfile
++ jjob_header.sh[90]: pgmerr=errfile
++ jjob_header.sh[96]: export EXPDIR=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76
++ jjob_header.sh[96]: EXPDIR=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76
++ jjob_header.sh[97]: for config in "${configs[@]:-''}"
++ jjob_header.sh[98]: source /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76/config.base
+++ config.base[6]: echo 'BEGIN: config.base'
BEGIN: config.base
+++ config.base[9]: export machine=HERCULES
+++ config.base[9]: machine=HERCULES
+++ config.base[12]: export RUN_ENVIR=emc
+++ config.base[12]: RUN_ENVIR=emc
+++ config.base[15]: export ACCOUNT=nems
+++ config.base[15]: ACCOUNT=nems
+++ config.base[16]: export ACCOUNT_SERVICE=fv3-cpu
+++ config.base[16]: ACCOUNT_SERVICE=fv3-cpu
+++ config.base[17]: export QUEUE=batch
+++ config.base[17]: QUEUE=batch
+++ config.base[18]: export QUEUE_SERVICE=batch
+++ config.base[18]: QUEUE_SERVICE=batch
+++ config.base[19]: export PARTITION_BATCH=hercules
+++ config.base[19]: PARTITION_BATCH=hercules
+++ config.base[20]: export PARTITION_SERVICE=service
+++ config.base[20]: PARTITION_SERVICE=service
+++ config.base[21]: export RESERVATION=
+++ config.base[21]: RESERVATION=
+++ config.base[24]: export HPSS_PROJECT=emc-global
+++ config.base[24]: HPSS_PROJECT=emc-global
+++ config.base[27]: export HOMEgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs
+++ config.base[27]: HOMEgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs
+++ config.base[28]: export EXECgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/exec
+++ config.base[28]: EXECgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/exec
+++ config.base[29]: export FIXgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix
+++ config.base[29]: FIXgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix
+++ config.base[30]: export PARMgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/parm
+++ config.base[30]: PARMgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/parm
+++ config.base[31]: export SCRgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/scripts
+++ config.base[31]: SCRgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/scripts
+++ config.base[32]: export USHgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/ush
+++ config.base[32]: USHgfs=/work2/noaa/stmp/CI/HERCULES/2657/gfs/ush
+++ config.base[34]: export FIXam=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/am
+++ config.base[34]: FIXam=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/am
+++ config.base[35]: export FIXaer=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/aer
+++ config.base[35]: FIXaer=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/aer
+++ config.base[36]: export FIXcpl=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/cpl
+++ config.base[36]: FIXcpl=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/cpl
+++ config.base[37]: export FIXlut=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/lut
+++ config.base[37]: FIXlut=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/lut
+++ config.base[38]: export FIXcice=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/cice
+++ config.base[38]: FIXcice=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/cice
+++ config.base[39]: export FIXmom=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/mom6
+++ config.base[39]: FIXmom=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/mom6
+++ config.base[40]: export FIXreg2grb2=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/reg2grb2
+++ config.base[40]: FIXreg2grb2=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/reg2grb2
+++ config.base[41]: export FIXgdas=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gdas
+++ config.base[41]: FIXgdas=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gdas
+++ config.base[46]: export PACKAGEROOT=/work/noaa/global/glopara/nwpara
+++ config.base[46]: PACKAGEROOT=/work/noaa/global/glopara/nwpara
+++ config.base[47]: export COMROOT=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT
+++ config.base[47]: COMROOT=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT
+++ config.base[48]: export COMINsyn=/work/noaa/global/glopara/com/gfs/prod/syndat
+++ config.base[48]: COMINsyn=/work/noaa/global/glopara/com/gfs/prod/syndat
+++ config.base[49]: export DMPDIR=/work/noaa/rstprod/dump
+++ config.base[49]: DMPDIR=/work/noaa/rstprod/dump
+++ config.base[50]: export BASE_CPLIC=/work/noaa/global/glopara/data/ICSDIR/prototype_ICs
+++ config.base[50]: BASE_CPLIC=/work/noaa/global/glopara/data/ICSDIR/prototype_ICs
+++ config.base[54]: export COMINecmwf=/work/noaa/global/glopara/data/external_gempak/ecmwf
+++ config.base[54]: COMINecmwf=/work/noaa/global/glopara/data/external_gempak/ecmwf
+++ config.base[55]: export COMINnam=/work/noaa/global/glopara/data/external_gempak/nam
+++ config.base[55]: COMINnam=/work/noaa/global/glopara/data/external_gempak/nam
+++ config.base[56]: export COMINukmet=/work/noaa/global/glopara/data/external_gempak/ukmet
+++ config.base[56]: COMINukmet=/work/noaa/global/glopara/data/external_gempak/ukmet
+++ config.base[59]: export HOMEDIR=/work/noaa/global/mterry
+++ config.base[59]: HOMEDIR=/work/noaa/global/mterry
+++ config.base[60]: export STMP=/work/noaa/stmp/mterry/HERCULES
+++ config.base[60]: STMP=/work/noaa/stmp/mterry/HERCULES
+++ config.base[61]: export PTMP=/work/noaa/stmp/mterry/HERCULES
+++ config.base[61]: PTMP=/work/noaa/stmp/mterry/HERCULES
+++ config.base[62]: export NOSCRUB=/work/noaa/global/mterry
+++ config.base[62]: NOSCRUB=/work/noaa/global/mterry
+++ config.base[65]: export BASE_GIT=/work/noaa/global/glopara/git_rocky9
+++ config.base[65]: BASE_GIT=/work/noaa/global/glopara/git_rocky9
+++ config.base[68]: export DO_GOES=NO
+++ config.base[68]: DO_GOES=NO
+++ config.base[69]: export DO_BUFRSND=NO
+++ config.base[69]: DO_BUFRSND=NO
+++ config.base[70]: export DO_GEMPAK=NO
+++ config.base[70]: DO_GEMPAK=NO
+++ config.base[71]: export DO_AWIPS=NO
+++ config.base[71]: DO_AWIPS=NO
+++ config.base[72]: export DO_NPOESS=NO
+++ config.base[72]: DO_NPOESS=NO
+++ config.base[73]: export DO_TRACKER=YES
+++ config.base[73]: DO_TRACKER=YES
+++ config.base[74]: export DO_GENESIS=YES
+++ config.base[74]: DO_GENESIS=YES
+++ config.base[75]: export DO_GENESIS_FSU=NO
+++ config.base[75]: DO_GENESIS_FSU=NO
+++ config.base[76]: export DO_VERFOZN=YES
+++ config.base[76]: DO_VERFOZN=YES
+++ config.base[77]: export DO_VERFRAD=YES
+++ config.base[77]: DO_VERFRAD=YES
+++ config.base[78]: export DO_VMINMON=YES
+++ config.base[78]: DO_VMINMON=YES
+++ config.base[79]: export DO_MOS=NO
+++ config.base[79]: DO_MOS=NO
+++ config.base[85]: export REALTIME=YES
+++ config.base[85]: REALTIME=YES
+++ config.base[88]: export MODE=cycled
+++ config.base[88]: MODE=cycled
+++ config.base[97]: export FIXgsi=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi
+++ config.base[97]: FIXgsi=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi
+++ config.base[98]: export HOMEpost=/work2/noaa/stmp/CI/HERCULES/2657/gfs
+++ config.base[98]: HOMEpost=/work2/noaa/stmp/CI/HERCULES/2657/gfs
+++ config.base[99]: export HOMEobsproc=/work/noaa/global/glopara/git_rocky9/obsproc/v1.1.2
+++ config.base[99]: HOMEobsproc=/work/noaa/global/glopara/git_rocky9/obsproc/v1.1.2
+++ config.base[102]: export 'NCP=/bin/cp -p'
+++ config.base[102]: NCP='/bin/cp -p'
+++ config.base[103]: export NMV=/bin/mv
+++ config.base[103]: NMV=/bin/mv
+++ config.base[104]: export 'NLN=/bin/ln -sf'
+++ config.base[104]: NLN='/bin/ln -sf'
+++ config.base[105]: export VERBOSE=YES
+++ config.base[105]: VERBOSE=YES
+++ config.base[106]: export KEEPDATA=NO
+++ config.base[106]: KEEPDATA=NO
+++ config.base[107]: export DEBUG_POSTSCRIPT=NO
+++ config.base[107]: DEBUG_POSTSCRIPT=NO
+++ config.base[108]: export CHGRP_RSTPROD=YES
+++ config.base[108]: CHGRP_RSTPROD=YES
+++ config.base[109]: export 'CHGRP_CMD=chgrp rstprod'
+++ config.base[109]: CHGRP_CMD='chgrp rstprod'
+++ config.base[110]: export NCDUMP=/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-c-4.9.2-tslbcfy/bin/ncdump
+++ config.base[110]: NCDUMP=/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-c-4.9.2-tslbcfy/bin/ncdump
+++ config.base[111]: export NCLEN=/work2/noaa/stmp/CI/HERCULES/2657/gfs/ush/getncdimlen
+++ config.base[111]: NCLEN=/work2/noaa/stmp/CI/HERCULES/2657/gfs/ush/getncdimlen
+++ config.base[114]: export BASE_ENV=/work2/noaa/stmp/CI/HERCULES/2657/gfs/env
+++ config.base[114]: BASE_ENV=/work2/noaa/stmp/CI/HERCULES/2657/gfs/env
+++ config.base[115]: export BASE_JOB=/work2/noaa/stmp/CI/HERCULES/2657/gfs/jobs/rocoto
+++ config.base[115]: BASE_JOB=/work2/noaa/stmp/CI/HERCULES/2657/gfs/jobs/rocoto
+++ config.base[118]: export SDATE=2021122018
+++ config.base[118]: SDATE=2021122018
+++ config.base[119]: export EDATE=2021122106
+++ config.base[119]: EDATE=2021122106
+++ config.base[120]: export EXP_WARM_START=.false.
+++ config.base[120]: EXP_WARM_START=.false.
+++ config.base[121]: export assim_freq=6
+++ config.base[121]: assim_freq=6
+++ config.base[122]: export PSLOT=C96C48_hybatmDA_8f40ef76
+++ config.base[122]: PSLOT=C96C48_hybatmDA_8f40ef76
+++ config.base[123]: export EXPDIR=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76
+++ config.base[123]: EXPDIR=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76
+++ config.base[124]: export ROTDIR=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76
+++ config.base[124]: ROTDIR=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76
+++ config.base[125]: export ROTDIR_DUMP=YES
+++ config.base[125]: ROTDIR_DUMP=YES
+++ config.base[126]: export DUMP_SUFFIX=
+++ config.base[126]: DUMP_SUFFIX=
+++ config.base[127]: [[ 2021122106 -ge 2019092100 ]]
+++ config.base[127]: [[ 2021122106 -le 2019110700 ]]
+++ config.base[130]: export DATAROOT=/work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76
+++ config.base[130]: DATAROOT=/work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76
+++ config.base[131]: export RUNDIR=/work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76
+++ config.base[131]: RUNDIR=/work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76
+++ config.base[132]: export ARCDIR=/work/noaa/global/mterry/archive/C96C48_hybatmDA_8f40ef76
+++ config.base[132]: ARCDIR=/work/noaa/global/mterry/archive/C96C48_hybatmDA_8f40ef76
+++ config.base[133]: export ATARDIR=/work/noaa/global/mterry/archive_rotdir/C96C48_hybatmDA_8f40ef76
+++ config.base[133]: ATARDIR=/work/noaa/global/mterry/archive_rotdir/C96C48_hybatmDA_8f40ef76
+++ config.base[136]: export envir=prod
+++ config.base[136]: envir=prod
+++ config.base[137]: export NET=gfs
+++ config.base[137]: NET=gfs
+++ config.base[138]: export RUN=enkfgdas
+++ config.base[138]: RUN=enkfgdas
+++ config.base[144]: source /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76/config.com
++++ config.com[4]: echo 'BEGIN: config.com'
BEGIN: config.com
++++ config.com[37]: [[ emc == \n\c\o ]]
++++ config.com[41]: COM_OBS_TMPL='${ROTDIR}/${RUN}.${YMD}/${HH}/obs'
++++ config.com[42]: COM_RTOFS_TMPL='${DMPDIR}'
++++ config.com[44]: declare -rx COM_OBS_TMPL COM_RTOFS_TMPL
++++ config.com[45]: declare -rx 'COM_OBSDMP_TMPL=${DMPDIR}/${DUMP}${DUMP_SUFFIX}.${YMD}/${HH}/atmos'
++++ config.com[47]: COM_BASE='${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}'
++++ config.com[49]: declare -rx 'COM_TOP_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}'
++++ config.com[51]: declare -rx 'COM_CONF_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/conf'
++++ config.com[52]: declare -rx 'COM_OBS_JEDI=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/obs_jedi'
++++ config.com[54]: declare -rx 'COM_ATMOS_INPUT_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/atmos/input'
++++ config.com[55]: declare -rx 'COM_ATMOS_RESTART_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/atmos/restart'
++++ config.com[56]: declare -rx 'COM_ATMOS_ANALYSIS_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/analysis/atmos'
++++ config.com[57]: declare -rx 'COM_SNOW_ANALYSIS_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/analysis/snow'
++++ config.com[58]: declare -rx 'COM_ATMOS_HISTORY_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/atmos/history'
++++ config.com[59]: declare -rx 'COM_ATMOS_MASTER_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/atmos/master'
++++ config.com[60]: declare -rx 'COM_ATMOS_GRIB_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/grib2'
++++ config.com[61]: declare -rx 'COM_ATMOS_GRIB_GRID_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/grib2/${GRID}'
++++ config.com[62]: declare -rx 'COM_ATMOS_BUFR_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/bufr'
++++ config.com[63]: declare -rx 'COM_ATMOS_GEMPAK_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/gempak/${GRID}'
++++ config.com[64]: declare -rx 'COM_ATMOS_GENESIS_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/cyclone/genesis_vital'
++++ config.com[65]: declare -rx 'COM_ATMOS_TRACK_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/cyclone/tracks'
++++ config.com[66]: declare -rx 'COM_ATMOS_GOES_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/goes_sim'
++++ config.com[67]: declare -rx 'COM_ATMOS_IMAGERY_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/imagery'
++++ config.com[68]: declare -rx 'COM_ATMOS_OZNMON_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/oznmon'
++++ config.com[69]: declare -rx 'COM_ATMOS_RADMON_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/radmon'
++++ config.com[70]: declare -rx 'COM_ATMOS_MINMON_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/minmon'
++++ config.com[71]: declare -rx 'COM_ATMOS_WMO_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/atmos/wmo'
++++ config.com[73]: declare -rx 'COM_WAVE_RESTART_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/wave/restart'
++++ config.com[74]: declare -rx 'COM_WAVE_PREP_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/wave/prep'
++++ config.com[75]: declare -rx 'COM_WAVE_HISTORY_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/wave/history'
++++ config.com[76]: declare -rx 'COM_WAVE_GRID_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/wave/gridded'
++++ config.com[77]: declare -rx 'COM_WAVE_STATION_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/wave/station'
++++ config.com[78]: declare -rx 'COM_WAVE_GEMPAK_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/wave/gempak'
++++ config.com[79]: declare -rx 'COM_WAVE_WMO_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/wave/wmo'
++++ config.com[81]: declare -rx 'COM_OCEAN_HISTORY_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/ocean/history'
++++ config.com[82]: declare -rx 'COM_OCEAN_RESTART_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/ocean/restart'
++++ config.com[83]: declare -rx 'COM_OCEAN_INPUT_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/ocean/input'
++++ config.com[84]: declare -rx 'COM_OCEAN_ANALYSIS_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/analysis/ocean'
++++ config.com[85]: declare -rx 'COM_OCEAN_NETCDF_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/ocean/netcdf'
++++ config.com[86]: declare -rx 'COM_OCEAN_GRIB_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/ocean/grib2'
++++ config.com[87]: declare -rx 'COM_OCEAN_GRIB_GRID_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/ocean/grib2/${GRID}'
++++ config.com[89]: declare -rx 'COM_ICE_ANALYSIS_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/analysis/ice'
++++ config.com[90]: declare -rx 'COM_ICE_INPUT_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/ice/input'
++++ config.com[91]: declare -rx 'COM_ICE_HISTORY_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/ice/history'
++++ config.com[92]: declare -rx 'COM_ICE_RESTART_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/ice/restart'
++++ config.com[93]: declare -rx 'COM_ICE_NETCDF_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/ice/netcdf'
++++ config.com[94]: declare -rx 'COM_ICE_GRIB_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/ice/grib2'
++++ config.com[95]: declare -rx 'COM_ICE_GRIB_GRID_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/products/ice/grib2/${GRID}'
++++ config.com[97]: declare -rx 'COM_CHEM_HISTORY_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/chem/history'
++++ config.com[98]: declare -rx 'COM_CHEM_ANALYSIS_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/analysis/chem'
++++ config.com[100]: declare -rx 'COM_MED_RESTART_TMPL=${ROTDIR}/${RUN}.${YMD}/${HH}/${MEMDIR}/model_data/med/restart'
+++ config.base[147]: export 'ERRSCRIPT=eval [[ $err = 0 ]]'
+++ config.base[147]: ERRSCRIPT='eval [[ $err = 0 ]]'
+++ config.base[148]: export LOGSCRIPT=
+++ config.base[148]: LOGSCRIPT=
+++ config.base[151]: export 'REDOUT=1>'
+++ config.base[151]: REDOUT='1>'
+++ config.base[152]: export 'REDERR=2>'
+++ config.base[152]: REDERR='2>'
+++ config.base[154]: export SENDECF=NO
+++ config.base[154]: SENDECF=NO
+++ config.base[155]: export SENDSDM=NO
+++ config.base[155]: SENDSDM=NO
+++ config.base[156]: export SENDDBN_NTC=NO
+++ config.base[156]: SENDDBN_NTC=NO
+++ config.base[157]: export SENDDBN=NO
+++ config.base[157]: SENDDBN=NO
+++ config.base[158]: export DBNROOT=/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/prod-util-2.1.1-ddlo2cq/fakedbn
+++ config.base[158]: DBNROOT=/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/prod-util-2.1.1-ddlo2cq/fakedbn
+++ config.base[161]: export APP=ATM
+++ config.base[161]: APP=ATM
+++ config.base[163]: shopt -s extglob
+++ config.base[165]: case "${RUN}" in
+++ config.base[167]: APP=ATM
+++ config.base[172]: shopt -u extglob
+++ config.base[175]: export DO_ATM=YES
+++ config.base[175]: DO_ATM=YES
+++ config.base[176]: export DO_COUPLED=NO
+++ config.base[176]: DO_COUPLED=NO
+++ config.base[177]: export DO_WAVE=NO
+++ config.base[177]: DO_WAVE=NO
+++ config.base[178]: export DO_OCN=NO
+++ config.base[178]: DO_OCN=NO
+++ config.base[179]: export DO_ICE=NO
+++ config.base[179]: DO_ICE=NO
+++ config.base[180]: export DO_AERO=NO
+++ config.base[180]: DO_AERO=NO
+++ config.base[181]: export DO_PREP_OBS_AERO=NO
+++ config.base[181]: DO_PREP_OBS_AERO=NO
+++ config.base[182]: export AERO_FCST_CDUMP=
+++ config.base[182]: AERO_FCST_CDUMP=
+++ config.base[183]: export AERO_ANL_CDUMP=
+++ config.base[183]: AERO_ANL_CDUMP=
+++ config.base[184]: export WAVE_CDUMP=
+++ config.base[184]: WAVE_CDUMP=
+++ config.base[185]: export DOBNDPNT_WAVE=NO
+++ config.base[185]: DOBNDPNT_WAVE=NO
+++ config.base[186]: export DOIBP_WAV=NO
+++ config.base[186]: DOIBP_WAV=NO
+++ config.base[187]: export FRAC_GRID=.true.
+++ config.base[187]: FRAC_GRID=.true.
+++ config.base[188]: export DO_NEST=NO
+++ config.base[188]: DO_NEST=NO
+++ config.base[189]: [[ NO == \Y\E\S ]]
+++ config.base[195]: export ntiles=6
+++ config.base[195]: ntiles=6
+++ config.base[196]: export FIXugwd=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/ugwd
+++ config.base[196]: FIXugwd=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/ugwd
+++ config.base[197]: export FIXorog=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/orog
+++ config.base[197]: FIXorog=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/orog
+++ config.base[201]: export OPS_RES=C768
+++ config.base[201]: OPS_RES=C768
+++ config.base[204]: export LEVS=128
+++ config.base[204]: LEVS=128
+++ config.base[205]: export CASE=C96
+++ config.base[205]: CASE=C96
+++ config.base[206]: export CASE_ENS=C48
+++ config.base[206]: CASE_ENS=C48
+++ config.base[207]: export OCNRES=500
+++ config.base[207]: OCNRES=500
+++ config.base[208]: export ICERES=500
+++ config.base[208]: ICERES=500
+++ config.base[211]: case "${CASE}" in
+++ config.base[216]: export waveGRD=uglo_100km
+++ config.base[216]: waveGRD=uglo_100km
+++ config.base[230]: case "${APP}" in
+++ config.base[271]: [[ enkfgdas =~ gdas ]]
+++ config.base[272]: export FHCYC=1
+++ config.base[272]: FHCYC=1
+++ config.base[273]: export FTSFS=10
+++ config.base[273]: FTSFS=10
+++ config.base[279]: export FHMIN=0
+++ config.base[279]: FHMIN=0
+++ config.base[280]: export FHMAX=9
+++ config.base[280]: FHMAX=9
+++ config.base[281]: export FHOUT=3
+++ config.base[281]: FHOUT=3
+++ config.base[282]: export FHOUT_OCN=3
+++ config.base[282]: FHOUT_OCN=3
+++ config.base[283]: export FHOUT_ICE=3
+++ config.base[283]: FHOUT_ICE=3
+++ config.base[286]: export EUPD_CYC=gdas
+++ config.base[286]: EUPD_CYC=gdas
+++ config.base[289]: export gfs_cyc=1
+++ config.base[289]: gfs_cyc=1
+++ config.base[292]: export FHMIN_GFS=0
+++ config.base[292]: FHMIN_GFS=0
+++ config.base[293]: export FHMAX_GFS=120
+++ config.base[293]: FHMAX_GFS=120
+++ config.base[294]: export FHOUT_GFS=3
+++ config.base[294]: FHOUT_GFS=3
+++ config.base[295]: export FHMAX_HF_GFS=0
+++ config.base[295]: FHMAX_HF_GFS=0
+++ config.base[296]: export FHOUT_HF_GFS=1
+++ config.base[296]: FHOUT_HF_GFS=1
+++ config.base[297]: export FHOUT_OCN_GFS=6
+++ config.base[297]: FHOUT_OCN_GFS=6
+++ config.base[298]: export FHOUT_ICE_GFS=6
+++ config.base[298]: FHOUT_ICE_GFS=6
+++ config.base[299]: export FHMIN_WAV=0
+++ config.base[299]: FHMIN_WAV=0
+++ config.base[300]: export FHOUT_WAV=3
+++ config.base[300]: FHOUT_WAV=3
+++ config.base[301]: export FHMAX_HF_WAV=120
+++ config.base[301]: FHMAX_HF_WAV=120
+++ config.base[302]: export FHOUT_HF_WAV=1
+++ config.base[302]: FHOUT_HF_WAV=1
+++ config.base[303]: export FHMAX_WAV=9
+++ config.base[303]: FHMAX_WAV=9
+++ config.base[304]: export FHMAX_WAV_GFS=120
+++ config.base[304]: FHMAX_WAV_GFS=120
+++ config.base[305]: (( gfs_cyc != 0 ))
+++ config.base[306]: export STEP_GFS=24
+++ config.base[306]: STEP_GFS=24
+++ config.base[311]: export ILPOST=1
+++ config.base[311]: ILPOST=1
+++ config.base[312]: (( FHMAX_HF_GFS < 120 ))
+++ config.base[313]: export ILPOST=3
+++ config.base[313]: ILPOST=3
+++ config.base[317]: export restart_interval_gfs=12
+++ config.base[317]: restart_interval_gfs=12
+++ config.base[322]: export QUILTING=.true.
+++ config.base[322]: QUILTING=.true.
+++ config.base[323]: export OUTPUT_GRID=gaussian_grid
+++ config.base[323]: OUTPUT_GRID=gaussian_grid
+++ config.base[324]: export WRITE_DOPOST=.true.
+++ config.base[324]: WRITE_DOPOST=.true.
+++ config.base[325]: export WRITE_NSFLIP=.true.
+++ config.base[325]: WRITE_NSFLIP=.true.
+++ config.base[328]: export DOIAU=YES
+++ config.base[328]: DOIAU=YES
+++ config.base[329]: export IAUFHRS=3,6,9
+++ config.base[329]: IAUFHRS=3,6,9
+++ config.base[330]: export IAU_FHROT=3
+++ config.base[330]: IAU_FHROT=3
+++ config.base[331]: export IAU_DELTHRS=6
+++ config.base[331]: IAU_DELTHRS=6
+++ config.base[332]: export IAU_OFFSET=6
+++ config.base[332]: IAU_OFFSET=6
+++ config.base[333]: export DOIAU_ENKF=YES
+++ config.base[333]: DOIAU_ENKF=YES
+++ config.base[334]: export IAUFHRS_ENKF=3,6,9
+++ config.base[334]: IAUFHRS_ENKF=3,6,9
+++ config.base[335]: export IAU_DELTHRS_ENKF=6
+++ config.base[335]: IAU_DELTHRS_ENKF=6
+++ config.base[338]: export lobsdiag_forenkf=.true.
+++ config.base[338]: lobsdiag_forenkf=.true.
+++ config.base[346]: export imp_physics=8
+++ config.base[346]: imp_physics=8
+++ config.base[350]: export DO_JEDIATMVAR=NO
+++ config.base[350]: DO_JEDIATMVAR=NO
+++ config.base[351]: export DO_JEDIATMENS=NO
+++ config.base[351]: DO_JEDIATMENS=NO
+++ config.base[352]: export DO_JEDIOCNVAR=NO
+++ config.base[352]: DO_JEDIOCNVAR=NO
+++ config.base[353]: export DO_JEDISNOWDA=NO
+++ config.base[353]: DO_JEDISNOWDA=NO
+++ config.base[354]: export DO_MERGENSST=NO
+++ config.base[354]: DO_MERGENSST=NO
+++ config.base[357]: export DOHYBVAR=YES
+++ config.base[357]: DOHYBVAR=YES
+++ config.base[358]: export NMEM_ENS=2
+++ config.base[358]: NMEM_ENS=2
+++ config.base[359]: export SMOOTH_ENKF=NO
+++ config.base[359]: SMOOTH_ENKF=NO
+++ config.base[360]: export l4densvar=.true.
+++ config.base[360]: l4densvar=.true.
+++ config.base[361]: export lwrite4danl=.true.
+++ config.base[361]: lwrite4danl=.true.
+++ config.base[362]: export DO_CALC_INCREMENT=NO
+++ config.base[362]: DO_CALC_INCREMENT=NO
+++ config.base[365]: export NMEM_ENS_GFS=30
+++ config.base[365]: NMEM_ENS_GFS=30
+++ config.base[366]: export NMEM_ENS_GFS_OFFSET=20
+++ config.base[366]: NMEM_ENS_GFS_OFFSET=20
+++ config.base[367]: export DO_CALC_INCREMENT_ENKF_GFS=NO
+++ config.base[367]: DO_CALC_INCREMENT_ENKF_GFS=NO
+++ config.base[370]: [[ YES = \Y\E\S ]]
+++ config.base[371]: export FHMIN_ENKF=3
+++ config.base[371]: FHMIN_ENKF=3
+++ config.base[372]: export FHMAX_ENKF=9
+++ config.base[372]: FHMAX_ENKF=9
+++ config.base[373]: export FHMAX_ENKF_GFS=12
+++ config.base[373]: FHMAX_ENKF_GFS=12
+++ config.base[374]: export FHOUT_ENKF_GFS=3
+++ config.base[374]: FHOUT_ENKF_GFS=3
+++ config.base[375]: [[ .true. = \.\t\r\u\e\. ]]
+++ config.base[376]: export FHOUT=1
+++ config.base[376]: FHOUT=1
+++ config.base[377]: export FHOUT_ENKF=1
+++ config.base[377]: FHOUT_ENKF=1
+++ config.base[384]: [[ YES == \N\O ]]
+++ config.base[392]: export ENKF_SPREAD=YES
+++ config.base[392]: ENKF_SPREAD=YES
+++ config.base[395]: [[ cycled = \c\y\c\l\e\d ]]
+++ config.base[395]: [[ 2021122018 = \2\0\2\1\1\2\2\1\0\6 ]]
+++ config.base[395]: [[ YES = \N\O ]]
+++ config.base[395]: [[ cycled = \f\o\r\e\c\a\s\t\-\o\n\l\y ]]
+++ config.base[401]: [[ YES = \N\O ]]
+++ config.base[405]: [[ YES == \Y\E\S ]]
+++ config.base[406]: export restart_interval_enkfgdas=3
+++ config.base[406]: restart_interval_enkfgdas=3
+++ config.base[411]: export restart_interval_enkfgfs=3
+++ config.base[411]: restart_interval_enkfgfs=3
+++ config.base[413]: [[ YES == \Y\E\S ]]
+++ config.base[414]: export restart_interval_gdas=3
+++ config.base[414]: restart_interval_gdas=3
+++ config.base[419]: export GSI_SOILANAL=NO
+++ config.base[419]: GSI_SOILANAL=NO
+++ config.base[422]: export DONST=YES
+++ config.base[422]: DONST=YES
+++ config.base[423]: [[ YES = \Y\E\S ]]
+++ config.base[423]: export 'FNTSFA= '
+++ config.base[423]: FNTSFA=' '
+++ config.base[426]: export nst_anl=.true.
+++ config.base[426]: nst_anl=.true.
+++ config.base[429]: export MAKE_NSSTBUFR=NO
+++ config.base[429]: MAKE_NSSTBUFR=NO
+++ config.base[432]: export MAKE_ACFTBUFR=NO
+++ config.base[432]: MAKE_ACFTBUFR=NO
+++ config.base[435]: export 'INCREMENTS_TO_ZERO='\''liq_wat_inc'\'','\''icmr_inc'\'','\''rwmr_inc'\'','\''snmr_inc'\'','\''grle_inc'\'''
+++ config.base[435]: INCREMENTS_TO_ZERO=''\''liq_wat_inc'\'','\''icmr_inc'\'','\''rwmr_inc'\'','\''snmr_inc'\'','\''grle_inc'\'''
+++ config.base[438]: export 'INCVARS_ZERO_STRAT='\''sphum_inc'\'','\''liq_wat_inc'\'','\''icmr_inc'\'','\''rwmr_inc'\'','\''snmr_inc'\'','\''grle_inc'\'''
+++ config.base[438]: INCVARS_ZERO_STRAT=''\''sphum_inc'\'','\''liq_wat_inc'\'','\''icmr_inc'\'','\''rwmr_inc'\'','\''snmr_inc'\'','\''grle_inc'\'''
+++ config.base[439]: export INCVARS_EFOLD=5
+++ config.base[439]: INCVARS_EFOLD=5
+++ config.base[444]: export netcdf_diag=.true.
+++ config.base[444]: netcdf_diag=.true.
+++ config.base[445]: export binary_diag=.false.
+++ config.base[445]: binary_diag=.false.
+++ config.base[448]: export DO_METP=NO
+++ config.base[448]: DO_METP=NO
+++ config.base[449]: export DO_FIT2OBS=YES
+++ config.base[449]: DO_FIT2OBS=YES
+++ config.base[450]: export DO_VRFY_OCEANDA=NO
+++ config.base[450]: DO_VRFY_OCEANDA=NO
+++ config.base[453]: export FHMAX_FITS=132
+++ config.base[453]: FHMAX_FITS=132
+++ config.base[454]: [[ 132 -gt 120 ]]
+++ config.base[454]: export FHMAX_FITS=120
+++ config.base[454]: FHMAX_FITS=120
+++ config.base[457]: export HPSSARCH=NO
+++ config.base[457]: HPSSARCH=NO
+++ config.base[458]: export LOCALARCH=NO
+++ config.base[458]: LOCALARCH=NO
+++ config.base[459]: [[ NO = \Y\E\S ]]
+++ config.base[463]: export ARCH_CYC=00
+++ config.base[463]: ARCH_CYC=00
+++ config.base[464]: export ARCH_WARMICFREQ=4
+++ config.base[464]: ARCH_WARMICFREQ=4
+++ config.base[465]: export ARCH_FCSTICFREQ=1
+++ config.base[465]: ARCH_FCSTICFREQ=1
+++ config.base[468]: [[ NO = \Y\E\S ]]
+++ config.base[475]: export REPLAY_ICS=NO
+++ config.base[475]: REPLAY_ICS=NO
+++ config.base[476]: export OFFSET_START_HOUR=0
+++ config.base[476]: OFFSET_START_HOUR=0
+++ config.base[479]: export NUM_SND_COLLECTIVES=9
+++ config.base[479]: NUM_SND_COLLECTIVES=9
+++ config.base[481]: echo 'END: config.base'
END: config.base
++ jjob_header.sh[99]: status=0
++ jjob_header.sh[100]: (( status != 0 ))
++ jjob_header.sh[97]: for config in "${configs[@]:-''}"
++ jjob_header.sh[98]: source /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76/config.anal
+++ config.anal[6]: echo 'BEGIN: config.anal'
BEGIN: config.anal
+++ config.anal[9]: . /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76/config.resources anal
++++ config.resources[7]: (( 1 != 1 ))
++++ config.resources[31]: step=anal
++++ config.resources[33]: echo 'BEGIN: config.resources'
BEGIN: config.resources
++++ config.resources[35]: case ${machine} in
++++ config.resources[40]: npe_node_max=80
++++ config.resources[72]: export npe_node_max
++++ config.resources[74]: case ${step} in
++++ config.resources[536]: export wtime_anal=01:20:00
++++ config.resources[536]: wtime_anal=01:20:00
++++ config.resources[537]: export wtime_anal_gfs=01:00:00
++++ config.resources[537]: wtime_anal_gfs=01:00:00
++++ config.resources[538]: export npe_anal=780
++++ config.resources[538]: npe_anal=780
++++ config.resources[539]: export nth_anal=5
++++ config.resources[539]: nth_anal=5
++++ config.resources[540]: export npe_anal_gfs=825
++++ config.resources[540]: npe_anal_gfs=825
++++ config.resources[541]: export nth_anal_gfs=5
++++ config.resources[541]: nth_anal_gfs=5
++++ config.resources[542]: [[ HERCULES == \W\C\O\S\S\2 ]]
++++ config.resources[546]: case ${CASE} in
++++ config.resources[572]: export npe_anal=84
++++ config.resources[572]: npe_anal=84
++++ config.resources[573]: export npe_anal_gfs=84
++++ config.resources[573]: npe_anal_gfs=84
++++ config.resources[574]: [[ HERCULES == \S\4 ]]
++++ config.resources[592]: export npe_node_anal=16
++++ config.resources[592]: npe_node_anal=16
++++ config.resources[593]: export nth_cycle=5
++++ config.resources[593]: nth_cycle=5
++++ config.resources[594]: export npe_node_cycle=16
++++ config.resources[594]: npe_node_cycle=16
++++ config.resources[595]: export is_exclusive=True
++++ config.resources[595]: is_exclusive=True
++++ config.resources[1310]: echo 'END: config.resources'
END: config.resources
+++ config.anal[11]: [[ YES = \Y\E\S ]]
+++ config.anal[12]: . /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76/config.nsst
++++ config.nsst[6]: echo 'BEGIN: config.nsst'
BEGIN: config.nsst
++++ config.nsst[11]: export NST_MODEL=2
++++ config.nsst[11]: NST_MODEL=2
++++ config.nsst[14]: [[ NO == \Y\E\S ]]
++++ config.nsst[14]: [[ NO == \Y\E\S ]]
++++ config.nsst[19]: export NST_SPINUP=0
++++ config.nsst[19]: NST_SPINUP=0
++++ config.nsst[20]: cdate=2021122106
++++ config.nsst[21]: (( cdate < 2017072000 ))
++++ config.nsst[26]: export NST_RESV=0
++++ config.nsst[26]: NST_RESV=0
++++ config.nsst[29]: export ZSEA1=0
++++ config.nsst[29]: ZSEA1=0
++++ config.nsst[30]: export ZSEA2=0
++++ config.nsst[30]: ZSEA2=0
++++ config.nsst[32]: export NST_GSI=3
++++ config.nsst[32]: NST_GSI=3
++++ config.nsst[36]: export NSTINFO=0
++++ config.nsst[36]: NSTINFO=0
++++ config.nsst[37]: (( NST_GSI > 0 ))
++++ config.nsst[37]: export NSTINFO=4
++++ config.nsst[37]: NSTINFO=4
++++ config.nsst[39]: echo 'END: config.nsst'
END: config.nsst
+++ config.anal[15]: [[ enkfgdas = \g\f\s ]]
+++ config.anal[22]: export npe_gsi=84
+++ config.anal[22]: npe_gsi=84
+++ config.anal[24]: [[ enkfgdas == \g\f\s ]]
+++ config.anal[30]: [[ 128 = \1\2\8 ]]
+++ config.anal[31]: export 'GRIDOPTS=nlayers(63)=1,nlayers(64)=1,'
+++ config.anal[31]: GRIDOPTS='nlayers(63)=1,nlayers(64)=1,'
+++ config.anal[32]: export SETUP=gpstop=55,nsig_ext=45,
+++ config.anal[32]: SETUP=gpstop=55,nsig_ext=45,
+++ config.anal[36]: export lobsdiag_forenkf=.false.
+++ config.anal[36]: lobsdiag_forenkf=.false.
+++ config.anal[40]: export GSNDBF=/dev/null
+++ config.anal[40]: GSNDBF=/dev/null
+++ config.anal[41]: export AMSREBF=/dev/null
+++ config.anal[41]: AMSREBF=/dev/null
+++ config.anal[42]: export SSMITBF=/dev/null
+++ config.anal[42]: SSMITBF=/dev/null
+++ config.anal[43]: export AMSR2BF=/dev/null
+++ config.anal[43]: AMSR2BF=/dev/null
+++ config.anal[48]: export CONVINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_convinfo.txt
+++ config.anal[48]: CONVINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_convinfo.txt
+++ config.anal[49]: export OZINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_ozinfo.txt
+++ config.anal[49]: OZINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_ozinfo.txt
+++ config.anal[50]: export SATINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_satinfo.txt
+++ config.anal[50]: SATINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_satinfo.txt
+++ config.anal[51]: export OBERROR=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/prepobs_errtable.global
+++ config.anal[51]: OBERROR=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/prepobs_errtable.global
+++ config.anal[53]: [[ NO = \Y\E\S ]]
+++ config.anal[62]: [[ emc == \e\m\c ]]
+++ config.anal[64]: [[ 2021122106 -ge 2019021900 ]]
+++ config.anal[64]: [[ 2021122106 -lt 2019110706 ]]
+++ config.anal[70]: [[ 2021122106 -ge 2019110706 ]]
+++ config.anal[70]: [[ 2021122106 -lt 2020040718 ]]
+++ config.anal[76]: [[ 2021122106 -ge 2020040718 ]]
+++ config.anal[76]: [[ 2021122106 -lt 2020052612 ]]
+++ config.anal[82]: [[ 2021122106 -ge 2020052612 ]]
+++ config.anal[82]: [[ 2021122106 -lt 2020082412 ]]
+++ config.anal[88]: [[ 2021122106 -ge 2020082412 ]]
+++ config.anal[88]: [[ 2021122106 -lt 2020091612 ]]
+++ config.anal[93]: [[ 2021122106 -ge 2020091612 ]]
+++ config.anal[93]: [[ 2021122106 -lt 2021031712 ]]
+++ config.anal[98]: [[ 2021122106 -ge 2021031712 ]]
+++ config.anal[98]: [[ 2021122106 -lt 2021091612 ]]
+++ config.anal[112]: [[ 2021122106 -ge 2020011600 ]]
+++ config.anal[112]: [[ 2021122106 -lt 2020011806 ]]
+++ config.anal[118]: [[ 2021122106 -ge 2019021900 ]]
+++ config.anal[118]: [[ 2021122106 -lt 2019110706 ]]
+++ config.anal[123]: [[ 2021122106 -ge 2019110706 ]]
+++ config.anal[123]: [[ 2021122106 -lt 2020022012 ]]
+++ config.anal[128]: [[ 2021122106 -ge 2020022012 ]]
+++ config.anal[128]: [[ 2021122106 -lt 2021052118 ]]
+++ config.anal[133]: [[ 2021122106 -ge 2021052118 ]]
+++ config.anal[133]: [[ 2021122106 -lt 2021092206 ]]
+++ config.anal[138]: [[ 2021122106 -ge 2021092206 ]]
+++ config.anal[138]: [[ 2021122106 -lt 2021102612 ]]
+++ config.anal[155]: export AIRS_CADS=.false.
+++ config.anal[155]: AIRS_CADS=.false.
+++ config.anal[156]: export CRIS_CADS=.false.
+++ config.anal[156]: CRIS_CADS=.false.
+++ config.anal[157]: export IASI_CADS=.false.
+++ config.anal[157]: IASI_CADS=.false.
+++ config.anal[159]: echo 'END: config.anal'
END: config.anal
++ jjob_header.sh[99]: status=0
++ jjob_header.sh[100]: (( status != 0 ))
++ jjob_header.sh[97]: for config in "${configs[@]:-''}"
++ jjob_header.sh[98]: source /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76/config.eupd
+++ config.eupd[6]: echo 'BEGIN: config.eupd'
BEGIN: config.eupd
+++ config.eupd[9]: . /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/EXPDIR/C96C48_hybatmDA_8f40ef76/config.resources eupd
++++ config.resources[7]: (( 1 != 1 ))
++++ config.resources[31]: step=eupd
++++ config.resources[33]: echo 'BEGIN: config.resources'
BEGIN: config.resources
++++ config.resources[35]: case ${machine} in
++++ config.resources[40]: npe_node_max=80
++++ config.resources[72]: export npe_node_max
++++ config.resources[74]: case ${step} in
++++ config.resources[1044]: export wtime_eupd=00:30:00
++++ config.resources[1044]: wtime_eupd=00:30:00
++++ config.resources[1045]: case ${CASE} in
++++ config.resources[1068]: export npe_eupd=42
++++ config.resources[1068]: npe_eupd=42
++++ config.resources[1069]: export nth_eupd=2
++++ config.resources[1069]: nth_eupd=2
++++ config.resources[1070]: [[ HERCULES == \H\E\R\A ]]
++++ config.resources[1070]: [[ HERCULES == \J\E\T ]]
++++ config.resources[1079]: export npe_node_eupd=40
++++ config.resources[1079]: npe_node_eupd=40
++++ config.resources[1080]: export is_exclusive=True
++++ config.resources[1080]: is_exclusive=True
++++ config.resources[1310]: echo 'END: config.resources'
END: config.resources
+++ config.eupd[11]: export npe_enkf=42
+++ config.eupd[11]: npe_enkf=42
+++ config.eupd[17]: export modelspace_vloc=.true.
+++ config.eupd[17]: modelspace_vloc=.true.
+++ config.eupd[18]: export letkf_flag=.true.
+++ config.eupd[18]: letkf_flag=.true.
+++ config.eupd[19]: export getkf=.true.
+++ config.eupd[19]: getkf=.true.
+++ config.eupd[20]: export denkf=.true.
+++ config.eupd[20]: denkf=.true.
+++ config.eupd[21]: export nobsl_max=10000
+++ config.eupd[21]: nobsl_max=10000
+++ config.eupd[23]: export analpertwt=0.85
+++ config.eupd[23]: analpertwt=0.85
+++ config.eupd[24]: export readin_localization_enkf=.false.
+++ config.eupd[24]: readin_localization_enkf=.false.
+++ config.eupd[26]: export corrlength=1250
+++ config.eupd[26]: corrlength=1250
+++ config.eupd[27]: export lnsigcutoff=2.75
+++ config.eupd[27]: lnsigcutoff=2.75
+++ config.eupd[29]: export lobsdiag_forenkf=.true.
+++ config.eupd[29]: lobsdiag_forenkf=.true.
+++ config.eupd[32]: export NAM_ENKF=smoothparm=35,
+++ config.eupd[32]: NAM_ENKF=smoothparm=35,
+++ config.eupd[34]: echo 'END: config.eupd'
END: config.eupd
++ jjob_header.sh[99]: status=0
++ jjob_header.sh[100]: (( status != 0 ))
++ jjob_header.sh[110]: source /work2/noaa/stmp/CI/HERCULES/2657/gfs/env/HERCULES.env eupd
+++ HERCULES.env[3]: [[ 1 -ne 1 ]]
+++ HERCULES.env[13]: step=eupd
+++ HERCULES.env[15]: export 'launcher=srun -l --export=ALL'
+++ HERCULES.env[15]: launcher='srun -l --export=ALL'
+++ HERCULES.env[16]: export 'mpmd_opt=--multi-prog --output=mpmd.%j.%t.out'
+++ HERCULES.env[16]: mpmd_opt='--multi-prog --output=mpmd.%j.%t.out'
+++ HERCULES.env[19]: export MPI_BUFS_PER_PROC=2048
+++ HERCULES.env[19]: MPI_BUFS_PER_PROC=2048
+++ HERCULES.env[20]: export MPI_BUFS_PER_HOST=2048
+++ HERCULES.env[20]: MPI_BUFS_PER_HOST=2048
+++ HERCULES.env[21]: export MPI_GROUP_MAX=256
+++ HERCULES.env[21]: MPI_GROUP_MAX=256
+++ HERCULES.env[22]: export MPI_MEMMAP_OFF=1
+++ HERCULES.env[22]: MPI_MEMMAP_OFF=1
+++ HERCULES.env[23]: export MP_STDOUTMODE=ORDERED
+++ HERCULES.env[23]: MP_STDOUTMODE=ORDERED
+++ HERCULES.env[24]: export KMP_AFFINITY=scatter
+++ HERCULES.env[24]: KMP_AFFINITY=scatter
+++ HERCULES.env[25]: export OMP_STACKSIZE=2048000
+++ HERCULES.env[25]: OMP_STACKSIZE=2048000
+++ HERCULES.env[26]: export NTHSTACK=1024000000
+++ HERCULES.env[26]: NTHSTACK=1024000000
+++ HERCULES.env[28]: export I_MPI_EXTRA_FILESYSTEM=1
+++ HERCULES.env[28]: I_MPI_EXTRA_FILESYSTEM=1
+++ HERCULES.env[29]: export I_MPI_EXTRA_FILESYSTEM_LIST=lustre
+++ HERCULES.env[29]: I_MPI_EXTRA_FILESYSTEM_LIST=lustre
+++ HERCULES.env[31]: ulimit -s unlimited
+++ HERCULES.env[32]: ulimit -a
real-time non-blocking time (microseconds, -R) unlimited
core file size (blocks, -c) 0
data seg size (kbytes, -d) unlimited
scheduling priority (-e) 0
file size (blocks, -f) unlimited
pending signals (-i) 2042962
max locked memory (kbytes, -l) unlimited
max memory size (kbytes, -m) 520192000
open files (-n) 131072
pipe size (512 bytes, -p) 8
POSIX message queues (bytes, -q) 819200
real-time priority (-r) 0
stack size (kbytes, -s) unlimited
cpu time (seconds, -t) unlimited
max user processes (-u) 1028798
virtual memory (kbytes, -v) unlimited
file locks (-x) unlimited
+++ HERCULES.env[34]: case ${step} in
+++ HERCULES.env[201]: export CFP_MP=YES
+++ HERCULES.env[201]: CFP_MP=YES
+++ HERCULES.env[202]: export USE_CFP=YES
+++ HERCULES.env[202]: USE_CFP=YES
+++ HERCULES.env[203]: export 'APRUNCFP=srun -l --export=ALL -n $ncmd --multi-prog --output=mpmd.%j.%t.out'
+++ HERCULES.env[203]: APRUNCFP='srun -l --export=ALL -n $ncmd --multi-prog --output=mpmd.%j.%t.out'
+++ HERCULES.env[205]: nth_max=2
+++ HERCULES.env[207]: export NTHREADS_ENKF=2
+++ HERCULES.env[207]: NTHREADS_ENKF=2
+++ HERCULES.env[208]: [[ 2 -gt 2 ]]
+++ HERCULES.env[209]: export 'APRUN_ENKF=srun -l --export=ALL -n 42 --cpus-per-task=2'
+++ HERCULES.env[209]: APRUN_ENKF='srun -l --export=ALL -n 42 --cpus-per-task=2'
++ jjob_header.sh[111]: status=0
++ jjob_header.sh[112]: (( status != 0 ))
+ JGDAS_ENKF_UPDATE[10]: export CDUMP=gdas
+ JGDAS_ENKF_UPDATE[10]: CDUMP=gdas
++ JGDAS_ENKF_UPDATE[18]: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/prod-util-2.1.1-ddlo2cq/bin/ndate -6 2021122106
+ JGDAS_ENKF_UPDATE[18]: GDATE=2021122100
+ JGDAS_ENKF_UPDATE[20]: export gPDY=20211221
+ JGDAS_ENKF_UPDATE[20]: gPDY=20211221
+ JGDAS_ENKF_UPDATE[21]: export gcyc=00
+ JGDAS_ENKF_UPDATE[21]: gcyc=00
+ JGDAS_ENKF_UPDATE[22]: export GDUMP=gdas
+ JGDAS_ENKF_UPDATE[22]: GDUMP=gdas
+ JGDAS_ENKF_UPDATE[23]: export GDUMP_ENS=enkfgdas
+ JGDAS_ENKF_UPDATE[23]: GDUMP_ENS=enkfgdas
+ JGDAS_ENKF_UPDATE[25]: export APREFIX=enkfgdas.t06z.
+ JGDAS_ENKF_UPDATE[25]: APREFIX=enkfgdas.t06z.
+ JGDAS_ENKF_UPDATE[26]: export GPREFIX=enkfgdas.t00z.
+ JGDAS_ENKF_UPDATE[26]: GPREFIX=enkfgdas.t00z.
+ JGDAS_ENKF_UPDATE[28]: MEMDIR=ensstat
+ JGDAS_ENKF_UPDATE[28]: YMD=20211221
+ JGDAS_ENKF_UPDATE[28]: HH=06
+ JGDAS_ENKF_UPDATE[28]: declare_from_tmpl -rx COM_ATMOS_ANALYSIS_STAT:COM_ATMOS_ANALYSIS_TMPL
+ bash_utils.sh[35]: [[ NO == \N\O ]]
+ bash_utils.sh[35]: set +x
declare_from_tmpl :: COM_ATMOS_ANALYSIS_STAT=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/ensstat/analysis/atmos
+ JGDAS_ENKF_UPDATE[31]: MEMDIR=ensstat
+ JGDAS_ENKF_UPDATE[31]: RUN=enkfgdas
+ JGDAS_ENKF_UPDATE[31]: YMD=20211221
+ JGDAS_ENKF_UPDATE[31]: HH=00
+ JGDAS_ENKF_UPDATE[31]: declare_from_tmpl -rx COM_ATMOS_HISTORY_STAT_PREV:COM_ATMOS_HISTORY_TMPL
+ bash_utils.sh[35]: [[ NO == \N\O ]]
+ bash_utils.sh[35]: set +x
declare_from_tmpl :: COM_ATMOS_HISTORY_STAT_PREV=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/ensstat/model_data/atmos/history
+ JGDAS_ENKF_UPDATE[38]: /work2/noaa/stmp/CI/HERCULES/2657/gfs/scripts/exgdas_enkf_update.sh
Begin exgdas_enkf_update.sh at Mon Jun 17 15:41:35 UTC 2024
++ exgdas_enkf_update.sh[23]: pwd
+ exgdas_enkf_update.sh[23]: pwd=/work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260
+ exgdas_enkf_update.sh[26]: NCLEN=/work2/noaa/stmp/CI/HERCULES/2657/gfs/ush/getncdimlen
+ exgdas_enkf_update.sh[27]: USE_CFP=YES
+ exgdas_enkf_update.sh[28]: CFP_MP=YES
+ exgdas_enkf_update.sh[29]: nm=
+ exgdas_enkf_update.sh[30]: '[' YES = YES ']'
+ exgdas_enkf_update.sh[31]: nm=0
+ exgdas_enkf_update.sh[33]: APRUNCFP='srun -l --export=ALL -n $ncmd --multi-prog --output=mpmd.%j.%t.out'
+ exgdas_enkf_update.sh[34]: APRUN_ENKF='srun -l --export=ALL -n 42 --cpus-per-task=2'
+ exgdas_enkf_update.sh[35]: NTHREADS_ENKF=2
+ exgdas_enkf_update.sh[38]: ENKFEXEC=/work2/noaa/stmp/CI/HERCULES/2657/gfs/exec/enkf.x
+ exgdas_enkf_update.sh[41]: CDATE=2021122106
+ exgdas_enkf_update.sh[44]: GPREFIX=enkfgdas.t00z.
+ exgdas_enkf_update.sh[45]: APREFIX=enkfgdas.t06z.
+ exgdas_enkf_update.sh[47]: SMOOTH_ENKF=NO
+ exgdas_enkf_update.sh[49]: GBIASe=enkfgdas.t06z.abias_int.ensmean
+ exgdas_enkf_update.sh[50]: CNVSTAT=enkfgdas.t06z.cnvstat
+ exgdas_enkf_update.sh[51]: OZNSTAT=enkfgdas.t06z.oznstat
+ exgdas_enkf_update.sh[52]: RADSTAT=enkfgdas.t06z.radstat
+ exgdas_enkf_update.sh[53]: ENKFSTAT=enkfgdas.t06z.enkfstat
+ exgdas_enkf_update.sh[56]: USE_CORRELATED_OBERRS=NO
+ exgdas_enkf_update.sh[57]: NAM_ENKF=smoothparm=35,
+ exgdas_enkf_update.sh[58]: SATOBS_ENKF=
+ exgdas_enkf_update.sh[59]: OZOBS_ENKF=
+ exgdas_enkf_update.sh[60]: use_correlated_oberrs=.false.
+ exgdas_enkf_update.sh[61]: '[' NO == YES ']'
+ exgdas_enkf_update.sh[64]: imp_physics=8
+ exgdas_enkf_update.sh[65]: lupp=.true.
+ exgdas_enkf_update.sh[66]: corrlength=1250
+ exgdas_enkf_update.sh[67]: lnsigcutoff=2.75
+ exgdas_enkf_update.sh[68]: analpertwt=0.85
+ exgdas_enkf_update.sh[69]: readin_localization_enkf=.false.
+ exgdas_enkf_update.sh[70]: reducedgrid=.false.
+ exgdas_enkf_update.sh[71]: letkf_flag=.true.
+ exgdas_enkf_update.sh[72]: getkf=.true.
+ exgdas_enkf_update.sh[73]: denkf=.true.
+ exgdas_enkf_update.sh[74]: nobsl_max=10000
+ exgdas_enkf_update.sh[75]: lobsdiag_forenkf=.true.
+ exgdas_enkf_update.sh[76]: write_spread_diag=.false.
+ exgdas_enkf_update.sh[77]: cnvw_option=.false.
+ exgdas_enkf_update.sh[78]: netcdf_diag=.true.
+ exgdas_enkf_update.sh[79]: modelspace_vloc=.true.
+ exgdas_enkf_update.sh[80]: IAUFHRS_ENKF=3,6,9
+ exgdas_enkf_update.sh[81]: NMEM_ENS_MAX=2
+ exgdas_enkf_update.sh[82]: '[' enkfgdas = enkfgfs ']'
+ exgdas_enkf_update.sh[88]: DO_CALC_INCREMENT=NO
+ exgdas_enkf_update.sh[89]: NMEM_ENS=2
+ exgdas_enkf_update.sh[90]: mem_offset=0
+ exgdas_enkf_update.sh[92]: INCREMENTS_TO_ZERO=''\''liq_wat_inc'\'','\''icmr_inc'\'','\''rwmr_inc'\'','\''snmr_inc'\'','\''grle_inc'\'''
+ exgdas_enkf_update.sh[93]: GSI_SOILANAL=NO
+ exgdas_enkf_update.sh[97]: ATMGES_ENSMEAN=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/ensstat/model_data/atmos/history/enkfgdas.t00z.atmf006.ensmean.nc
++ exgdas_enkf_update.sh[98]: /work2/noaa/stmp/CI/HERCULES/2657/gfs/ush/getncdimlen /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/ensstat/model_data/atmos/history/enkfgdas.t00z.atmf006.ensmean.nc grid_xt
+ exgdas_enkf_update.sh[98]: LONB_ENKF=192
++ exgdas_enkf_update.sh[99]: /work2/noaa/stmp/CI/HERCULES/2657/gfs/ush/getncdimlen /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/ensstat/model_data/atmos/history/enkfgdas.t00z.atmf006.ensmean.nc grid_yt
+ exgdas_enkf_update.sh[99]: LATB_ENKF=96
++ exgdas_enkf_update.sh[100]: /work2/noaa/stmp/CI/HERCULES/2657/gfs/ush/getncdimlen /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/ensstat/model_data/atmos/history/enkfgdas.t00z.atmf006.ensmean.nc pfull
+ exgdas_enkf_update.sh[100]: LEVS_ENKF=127
+ exgdas_enkf_update.sh[101]: use_gfs_ncio=.true.
+ exgdas_enkf_update.sh[102]: use_gfs_nemsio=.false.
+ exgdas_enkf_update.sh[103]: paranc=.true.
+ exgdas_enkf_update.sh[104]: WRITE_INCR_ZERO='incvars_to_zero= '\''liq_wat_inc'\'','\''icmr_inc'\'','\''rwmr_inc'\'','\''snmr_inc'\'','\''grle_inc'\'','
+ exgdas_enkf_update.sh[105]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[108]: write_fv3_incr=.true.
+ exgdas_enkf_update.sh[110]: LATA_ENKF=96
+ exgdas_enkf_update.sh[111]: LONA_ENKF=192
+ exgdas_enkf_update.sh[112]: SATANGL=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_satangbias.txt
+ exgdas_enkf_update.sh[113]: SATINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_satinfo.txt
+ exgdas_enkf_update.sh[114]: CONVINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_convinfo.txt
+ exgdas_enkf_update.sh[115]: OZINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_ozinfo.txt
+ exgdas_enkf_update.sh[116]: SCANINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_scaninfo.txt
+ exgdas_enkf_update.sh[117]: HYBENSINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_hybens_info.l127.txt
+ exgdas_enkf_update.sh[118]: ANAVINFO=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_anavinfo.l127.txt
+ exgdas_enkf_update.sh[119]: VLOCALEIG=/work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/vlocal_eig_l127.dat
+ exgdas_enkf_update.sh[120]: ENKF_SUFFIX=s
+ exgdas_enkf_update.sh[121]: [[ NO = \N\O ]]
+ exgdas_enkf_update.sh[121]: ENKF_SUFFIX=
+ exgdas_enkf_update.sh[125]: mkdata=NO
+ exgdas_enkf_update.sh[126]: '[' '!' -d /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260 ']'
+ exgdas_enkf_update.sh[130]: cd /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260
+ exgdas_enkf_update.sh[134]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_satangbias.txt satbias_angle
+ exgdas_enkf_update.sh[135]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_satinfo.txt satinfo
+ exgdas_enkf_update.sh[136]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_scaninfo.txt scaninfo
+ exgdas_enkf_update.sh[137]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_convinfo.txt convinfo
+ exgdas_enkf_update.sh[138]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_ozinfo.txt ozinfo
+ exgdas_enkf_update.sh[139]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_hybens_info.l127.txt hybens_info
+ exgdas_enkf_update.sh[140]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/global_anavinfo.l127.txt anavinfo
+ exgdas_enkf_update.sh[141]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/gfs/fix/gsi/vlocal_eig_l127.dat vlocal_eig.dat
+ exgdas_enkf_update.sh[144]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/ensstat/analysis/atmos/enkfgdas.t06z.abias_int.ensmean satbias_in
+ exgdas_enkf_update.sh[148]: '[' YES = YES ']'
+ exgdas_enkf_update.sh[149]: [[ -f /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/untar.sh ]]
+ exgdas_enkf_update.sh[150]: [[ -f /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/mp_untar.sh ]]
+ exgdas_enkf_update.sh[151]: cat
+ exgdas_enkf_update.sh[165]: chmod 755 /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/untar.sh
+ exgdas_enkf_update.sh[171]: flist='enkfgdas.t06z.cnvstat enkfgdas.t06z.oznstat enkfgdas.t06z.radstat'
+ exgdas_enkf_update.sh[172]: '[' YES = YES ']'
+ exgdas_enkf_update.sh[173]: echo '0 /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/untar.sh ensmean /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/ensstat/analysis/atmos'
+ exgdas_enkf_update.sh[173]: tee -a /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/mp_untar.sh
0 /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/untar.sh ensmean /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/ensstat/analysis/atmos
+ exgdas_enkf_update.sh[174]: '[' YES = YES ']'
+ exgdas_enkf_update.sh[175]: nm=1
++ exgdas_enkf_update.sh[183]: echo 3,6,9
++ exgdas_enkf_update.sh[183]: sed 's/,/ /g'
+ exgdas_enkf_update.sh[183]: nfhrs='3 6 9'
++ exgdas_enkf_update.sh[184]: seq 1 2
+ exgdas_enkf_update.sh[184]: for imem in $(seq 1 $NMEM_ENS)
+ exgdas_enkf_update.sh[185]: smem=1
+ exgdas_enkf_update.sh[186]: (( smem > NMEM_ENS_MAX ))
++ exgdas_enkf_update.sh[189]: printf %03i 1
+ exgdas_enkf_update.sh[189]: gmemchar=mem001
++ exgdas_enkf_update.sh[190]: printf %03i 1
+ exgdas_enkf_update.sh[190]: memchar=mem001
+ exgdas_enkf_update.sh[192]: MEMDIR=mem001
+ exgdas_enkf_update.sh[192]: RUN=enkfgdas
+ exgdas_enkf_update.sh[192]: YMD=20211221
+ exgdas_enkf_update.sh[192]: HH=00
+ exgdas_enkf_update.sh[192]: declare_from_tmpl -x COM_ATMOS_HISTORY_MEM_PREV:COM_ATMOS_HISTORY_TMPL
+ bash_utils.sh[35]: [[ NO == \N\O ]]
+ bash_utils.sh[35]: set +x
declare_from_tmpl :: COM_ATMOS_HISTORY_MEM_PREV=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/mem001/model_data/atmos/history
+ exgdas_enkf_update.sh[195]: MEMDIR=mem001
+ exgdas_enkf_update.sh[195]: YMD=20211221
+ exgdas_enkf_update.sh[195]: HH=06
+ exgdas_enkf_update.sh[195]: declare_from_tmpl -x COM_ATMOS_ANALYSIS_MEM:COM_ATMOS_ANALYSIS_TMPL
+ bash_utils.sh[35]: [[ NO == \N\O ]]
+ bash_utils.sh[35]: set +x
declare_from_tmpl :: COM_ATMOS_ANALYSIS_MEM=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem001/analysis/atmos
+ exgdas_enkf_update.sh[198]: '[' .true. = .false. ']'
+ exgdas_enkf_update.sh[211]: mkdir -p /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem001/analysis/atmos
+ exgdas_enkf_update.sh[212]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[213]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/mem001/model_data/atmos/history/enkfgdas.t00z.atmf003.nc sfg_2021122106_fhr03_mem001
+ exgdas_enkf_update.sh[215]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[219]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[223]: '[' 3 -eq 6 ']'
+ exgdas_enkf_update.sh[232]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[236]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem001/analysis/atmos/enkfgdas.t06z.atmi003.nc incr_2021122106_fhr03_mem001
+ exgdas_enkf_update.sh[240]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[212]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[213]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/mem001/model_data/atmos/history/enkfgdas.t00z.atmf006.nc sfg_2021122106_fhr06_mem001
+ exgdas_enkf_update.sh[215]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[219]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[223]: '[' 6 -eq 6 ']'
+ exgdas_enkf_update.sh[224]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[228]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem001/analysis/atmos/enkfgdas.t06z.atminc.nc incr_2021122106_fhr06_mem001
+ exgdas_enkf_update.sh[240]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[212]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[213]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/mem001/model_data/atmos/history/enkfgdas.t00z.atmf009.nc sfg_2021122106_fhr09_mem001
+ exgdas_enkf_update.sh[215]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[219]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[223]: '[' 9 -eq 6 ']'
+ exgdas_enkf_update.sh[232]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[236]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem001/analysis/atmos/enkfgdas.t06z.atmi009.nc incr_2021122106_fhr09_mem001
+ exgdas_enkf_update.sh[240]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[184]: for imem in $(seq 1 $NMEM_ENS)
+ exgdas_enkf_update.sh[185]: smem=2
+ exgdas_enkf_update.sh[186]: (( smem > NMEM_ENS_MAX ))
++ exgdas_enkf_update.sh[189]: printf %03i 2
+ exgdas_enkf_update.sh[189]: gmemchar=mem002
++ exgdas_enkf_update.sh[190]: printf %03i 2
+ exgdas_enkf_update.sh[190]: memchar=mem002
+ exgdas_enkf_update.sh[192]: MEMDIR=mem002
+ exgdas_enkf_update.sh[192]: RUN=enkfgdas
+ exgdas_enkf_update.sh[192]: YMD=20211221
+ exgdas_enkf_update.sh[192]: HH=00
+ exgdas_enkf_update.sh[192]: declare_from_tmpl -x COM_ATMOS_HISTORY_MEM_PREV:COM_ATMOS_HISTORY_TMPL
+ bash_utils.sh[35]: [[ NO == \N\O ]]
+ bash_utils.sh[35]: set +x
declare_from_tmpl :: COM_ATMOS_HISTORY_MEM_PREV=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/mem002/model_data/atmos/history
+ exgdas_enkf_update.sh[195]: MEMDIR=mem002
+ exgdas_enkf_update.sh[195]: YMD=20211221
+ exgdas_enkf_update.sh[195]: HH=06
+ exgdas_enkf_update.sh[195]: declare_from_tmpl -x COM_ATMOS_ANALYSIS_MEM:COM_ATMOS_ANALYSIS_TMPL
+ bash_utils.sh[35]: [[ NO == \N\O ]]
+ bash_utils.sh[35]: set +x
declare_from_tmpl :: COM_ATMOS_ANALYSIS_MEM=/work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem002/analysis/atmos
+ exgdas_enkf_update.sh[198]: '[' .true. = .false. ']'
+ exgdas_enkf_update.sh[211]: mkdir -p /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem002/analysis/atmos
+ exgdas_enkf_update.sh[212]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[213]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/mem002/model_data/atmos/history/enkfgdas.t00z.atmf003.nc sfg_2021122106_fhr03_mem002
+ exgdas_enkf_update.sh[215]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[219]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[223]: '[' 3 -eq 6 ']'
+ exgdas_enkf_update.sh[232]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[236]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem002/analysis/atmos/enkfgdas.t06z.atmi003.nc incr_2021122106_fhr03_mem002
+ exgdas_enkf_update.sh[240]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[212]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[213]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/mem002/model_data/atmos/history/enkfgdas.t00z.atmf006.nc sfg_2021122106_fhr06_mem002
+ exgdas_enkf_update.sh[215]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[219]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[223]: '[' 6 -eq 6 ']'
+ exgdas_enkf_update.sh[224]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[228]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem002/analysis/atmos/enkfgdas.t06z.atminc.nc incr_2021122106_fhr06_mem002
+ exgdas_enkf_update.sh[240]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[212]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[213]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/mem002/model_data/atmos/history/enkfgdas.t00z.atmf009.nc sfg_2021122106_fhr09_mem002
+ exgdas_enkf_update.sh[215]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[219]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[223]: '[' 9 -eq 6 ']'
+ exgdas_enkf_update.sh[232]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[236]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/06/mem002/analysis/atmos/enkfgdas.t06z.atmi009.nc incr_2021122106_fhr09_mem002
+ exgdas_enkf_update.sh[240]: '[' NO = YES ']'
+ exgdas_enkf_update.sh[248]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[250]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/ensstat/model_data/atmos/history/enkfgdas.t00z.atmf003.ensmean.nc sfg_2021122106_fhr03_ensmean
+ exgdas_enkf_update.sh[252]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[248]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[250]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/ensstat/model_data/atmos/history/enkfgdas.t00z.atmf006.ensmean.nc sfg_2021122106_fhr06_ensmean
+ exgdas_enkf_update.sh[252]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[248]: for FHR in $nfhrs
+ exgdas_enkf_update.sh[250]: /bin/ln -sf /work2/noaa/stmp/CI/HERCULES/2657/RUNTESTS/COMROOT/C96C48_hybatmDA_8f40ef76/enkfgdas.20211221/00/ensstat/model_data/atmos/history/enkfgdas.t00z.atmf009.ensmean.nc sfg_2021122106_fhr09_ensmean
+ exgdas_enkf_update.sh[252]: '[' .false. = .true. ']'
+ exgdas_enkf_update.sh[258]: [[ YES = \Y\E\S ]]
+ exgdas_enkf_update.sh[259]: chmod 755 /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/mp_untar.sh
++ exgdas_enkf_update.sh[260]: cat /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/mp_untar.sh
++ exgdas_enkf_update.sh[260]: wc -l
+ exgdas_enkf_update.sh[260]: ncmd=1
+ exgdas_enkf_update.sh[261]: [[ 1 -gt 0 ]]
+ exgdas_enkf_update.sh[262]: ncmd_max=1
++ exgdas_enkf_update.sh[263]: eval echo srun -l --export=ALL -n '$ncmd' --multi-prog --output=mpmd.%j.%t.out
+++ exgdas_enkf_update.sh[263]: echo srun -l --export=ALL -n 1 --multi-prog --output=mpmd.%j.%t.out
+ exgdas_enkf_update.sh[263]: APRUNCFP='srun -l --export=ALL -n 1 --multi-prog --output=mpmd.%j.%t.out'
+ exgdas_enkf_update.sh[264]: srun -l --export=ALL -n 1 --multi-prog --output=mpmd.%j.%t.out /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/mp_untar.sh
srun: warning: can't run 1 processes on 2 nodes, setting nnodes to 1
+ exgdas_enkf_update.sh[265]: export err=0
+ exgdas_enkf_update.sh[265]: err=0
+ exgdas_enkf_update.sh[265]: err_chk
completed cleanly
+ exgdas_enkf_update.sh[271]: cat
+ exgdas_enkf_update.sh[405]: export OMP_NUM_THREADS=2
+ exgdas_enkf_update.sh[405]: OMP_NUM_THREADS=2
+ exgdas_enkf_update.sh[406]: export pgm=/work2/noaa/stmp/CI/HERCULES/2657/gfs/exec/enkf.x
+ exgdas_enkf_update.sh[406]: pgm=/work2/noaa/stmp/CI/HERCULES/2657/gfs/exec/enkf.x
+ exgdas_enkf_update.sh[407]: . prep_step
++ prep_step[3]: '[' -n /work2/noaa/stmp/CI/HERCULES/2657/gfs/exec/enkf.x ']'
++ prep_step[3]: '[' -n OUTPUT.118547 ']'
++ prep_step[4]: echo /work2/noaa/stmp/CI/HERCULES/2657/gfs/exec/enkf.x
++ prep_step[7]: '[' -f errfile ']'
++ prep_step[11]: export FORT01=0
++ prep_step[11]: FORT01=0
+++ prep_step[12]: env
+++ prep_step[12]: awk -F= '{print $1}'
+++ prep_step[12]: grep '^FORT[0-9]\{1,\}='
++ prep_step[12]: unset FORT01
+ exgdas_enkf_update.sh[409]: /bin/cp -p /work2/noaa/stmp/CI/HERCULES/2657/gfs/exec/enkf.x /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260
++ exgdas_enkf_update.sh[410]: basename /work2/noaa/stmp/CI/HERCULES/2657/gfs/exec/enkf.x
+ exgdas_enkf_update.sh[410]: srun -l --export=ALL -n 42 --cpus-per-task=2 /work/noaa/stmp/mterry/HERCULES/RUNDIRS/C96C48_hybatmDA_8f40ef76/eupd.118260/enkf.x
+ exgdas_enkf_update.sh[1]: postamble exgdas_enkf_update.sh 1718638895 71
+ preamble.sh[70]: set +x
End exgdas_enkf_update.sh at 15:43:27 with error code 71 (time elapsed: 00:01:52)
+ JGDAS_ENKF_UPDATE[1]: postamble JGDAS_ENKF_UPDATE 1718638882 71
+ preamble.sh[70]: set +x
End JGDAS_ENKF_UPDATE at 15:43:27 with error code 71 (time elapsed: 00:02:05)
+ eupd.sh[1]: postamble eupd.sh 1718638880 71
+ preamble.sh[70]: set +x
End eupd.sh at 15:43:27 with error code 71 (time elapsed: 00:02:07)
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